RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.22■□□□□ 0.99
TOP3A-213ENST00000582230 CLUHO75153 1309 aa21.22■□□□□ 0.99
TOP3A-213ENST00000582230 THAP12O43422 761 aa21.21■□□□□ 0.99
TOP3A-213ENST00000582230 PNMA6AP0CW24 399 aaPredicted RBP21.21■□□□□ 0.99
TOP3A-213ENST00000582230 HMGA1P17096 107 aaKnown RBP21.21■□□□□ 0.99
TOP3A-213ENST00000582230 PTPN21Q16825 1174 aa21.21■□□□□ 0.99
TOP3A-213ENST00000582230 PDZD4Q76G19 769 aaPredicted RBP21.21■□□□□ 0.99
TOP3A-213ENST00000582230 NUP93Q8N1F7 819 aa21.21■□□□□ 0.99
TOP3A-213ENST00000582230 ZMIZ2Q8NF64 920 aa21.21■□□□□ 0.99
TOP3A-213ENST00000582230 ZNF606Q8WXB4 792 aa21.21■□□□□ 0.99
TOP3A-213ENST00000582230 TRMT2BQ96GJ1 504 aaKnown RBP21.21■□□□□ 0.99
TOP3A-213ENST00000582230 MYRFLQ96LU7 910 aa21.21■□□□□ 0.99
TOP3A-213ENST00000582230 ZSWIM1Q9BR11 485 aa21.21■□□□□ 0.99
TOP3A-213ENST00000582230 LRRC3Q9BY71 257 aa21.21■□□□□ 0.99
TOP3A-213ENST00000582230 POMKQ9H5K3 350 aa21.21■□□□□ 0.99
TOP3A-213ENST00000582230 COMMD8Q9NX08 183 aa21.21■□□□□ 0.99
TOP3A-213ENST00000582230 BEST1O76090 585 aa21.2■□□□□ 0.98
TOP3A-213ENST00000582230 MICAL2O94851 1124 aa21.2■□□□□ 0.98
TOP3A-213ENST00000582230 RTN3O95197 1032 aaPredicted RBP21.2■□□□□ 0.98
TOP3A-213ENST00000582230 SETSIPP0DME0 302 aa21.2■□□□□ 0.98
TOP3A-213ENST00000582230 FSHRP23945 695 aa21.2■□□□□ 0.98
TOP3A-213ENST00000582230 KCNQ1P51787 676 aa21.2■□□□□ 0.98
TOP3A-213ENST00000582230 BST2Q10589 180 aaKnown RBP21.2■□□□□ 0.98
TOP3A-213ENST00000582230 PKDCCQ504Y2 493 aa21.2■□□□□ 0.98
TOP3A-213ENST00000582230 SLC47A2Q86VL8 602 aa21.2■□□□□ 0.98
TOP3A-213ENST00000582230 TTC30AQ86WT1 665 aa21.2■□□□□ 0.98
TOP3A-213ENST00000582230 TMC8Q8IU68 726 aa21.2■□□□□ 0.98
TOP3A-213ENST00000582230 HS6ST3Q8IZP7 471 aa21.2■□□□□ 0.98
TOP3A-213ENST00000582230 TRIM5Q9C035 493 aa21.2■□□□□ 0.98
TOP3A-213ENST00000582230 ITIH6Q6UXX5 1313 aa21.2■□□□□ 0.98
TOP3A-213ENST00000582230 REV3LO60673 3130 aa21.2■□□□□ 0.98
TOP3A-213ENST00000582230 A0A1W2PQJ5 194 aa21.19■□□□□ 0.98
TOP3A-213ENST00000582230 XPO1O14980 1071 aaKnown RBP21.19■□□□□ 0.98
TOP3A-213ENST00000582230 GFPT2O94808 682 aa21.19■□□□□ 0.98
TOP3A-213ENST00000582230 CALCAP01258 141 aa21.19■□□□□ 0.98
TOP3A-213ENST00000582230 CCDC172P0C7W6 258 aa21.19■□□□□ 0.98
TOP3A-213ENST00000582230 MYL4P12829 197 aa21.19■□□□□ 0.98
TOP3A-213ENST00000582230 CYP11B1P15538 503 aa21.19■□□□□ 0.98
TOP3A-213ENST00000582230 NTHL1P78549 312 aa21.19■□□□□ 0.98
TOP3A-213ENST00000582230 MTMR3Q13615 1198 aa21.19■□□□□ 0.98
TOP3A-213ENST00000582230 TTLL2Q9BWV7 592 aa21.19■□□□□ 0.98
TOP3A-213ENST00000582230 PHF7Q9BWX1 381 aaPredicted RBP21.19■□□□□ 0.98
TOP3A-213ENST00000582230 TTYH3Q9C0H2 523 aa21.19■□□□□ 0.98
TOP3A-213ENST00000582230 ACP6Q9NPH0 428 aa21.19■□□□□ 0.98
TOP3A-213ENST00000582230 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.19■□□□□ 0.98
TOP3A-213ENST00000582230 PCDHGC3Q9UN70 934 aa21.19■□□□□ 0.98
TOP3A-213ENST00000582230 MAGED2Q9UNF1 606 aaPredicted RBP21.19■□□□□ 0.98
TOP3A-213ENST00000582230 MRPS23Q9Y3D9 190 aaKnown RBP21.19■□□□□ 0.98
TOP3A-213ENST00000582230 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.19■□□□□ 0.98
TOP3A-213ENST00000582230 HHLA1C9JL84 531 aa21.18■□□□□ 0.98
TOP3A-213ENST00000582230 M0QYV0 167 aa21.18■□□□□ 0.98
TOP3A-213ENST00000582230 TNFRSF10BO14763 440 aa21.18■□□□□ 0.98
TOP3A-213ENST00000582230 IL9P15248 144 aa21.18■□□□□ 0.98
TOP3A-213ENST00000582230 CDC25CP30307 473 aa21.18■□□□□ 0.98
TOP3A-213ENST00000582230 KRT9P35527 623 aa21.18■□□□□ 0.98
TOP3A-213ENST00000582230 PDE6CP51160 858 aa21.18■□□□□ 0.98
TOP3A-213ENST00000582230 SLC5A3P53794 718 aa21.18■□□□□ 0.98
TOP3A-213ENST00000582230 PDE4CQ08493 712 aa21.18■□□□□ 0.98
TOP3A-213ENST00000582230 PRSS36Q5K4E3 855 aa21.18■□□□□ 0.98
TOP3A-213ENST00000582230 SPECC1LQ69YQ0 1117 aa21.18■□□□□ 0.98
TOP3A-213ENST00000582230 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.18■□□□□ 0.98
TOP3A-213ENST00000582230 ZNF397Q8NF99 534 aaPredicted RBP21.18■□□□□ 0.98
TOP3A-213ENST00000582230 UBA3Q8TBC4 463 aa21.18■□□□□ 0.98
TOP3A-213ENST00000582230 BAP1Q92560 729 aa21.18■□□□□ 0.98
TOP3A-213ENST00000582230 GCNAQ96QF7 691 aa21.18■□□□□ 0.98
TOP3A-213ENST00000582230 FBXO44Q9H4M3 255 aa21.18■□□□□ 0.98
TOP3A-213ENST00000582230 ZNF334Q9HCZ1 680 aaPredicted RBP21.18■□□□□ 0.98
TOP3A-213ENST00000582230 IL37Q9NZH6 218 aa21.18■□□□□ 0.98
TOP3A-213ENST00000582230 PRKAG3Q9UGI9 489 aa21.18■□□□□ 0.98
TOP3A-213ENST00000582230 USTQ9Y2C2 406 aa21.18■□□□□ 0.98
TOP3A-213ENST00000582230 NR2E1Q9Y466 385 aa21.18■□□□□ 0.98
TOP3A-213ENST00000582230 BMP1P13497 986 aa21.17■□□□□ 0.98
TOP3A-213ENST00000582230 FERP16591 822 aa21.17■□□□□ 0.98
TOP3A-213ENST00000582230 YWHAQP27348 245 aa21.17■□□□□ 0.98
TOP3A-213ENST00000582230 GABRR2P28476 465 aa21.17■□□□□ 0.98
TOP3A-213ENST00000582230 PLA2G4AP47712 749 aa21.17■□□□□ 0.98
TOP3A-213ENST00000582230 PPP3CCP48454 512 aa21.17■□□□□ 0.98
TOP3A-213ENST00000582230 OTOP3Q7RTS5 596 aa21.17■□□□□ 0.98
TOP3A-213ENST00000582230 PIGZQ86VD9 579 aa21.17■□□□□ 0.98
TOP3A-213ENST00000582230 ZNF677Q86XU0 584 aa21.17■□□□□ 0.98
TOP3A-213ENST00000582230 VSTM4Q8IW00 320 aa21.17■□□□□ 0.98
TOP3A-213ENST00000582230 STKLD1Q8NE28 680 aa21.17■□□□□ 0.98
TOP3A-213ENST00000582230 SLC35F5Q8WV83 523 aa21.17■□□□□ 0.98
TOP3A-213ENST00000582230 NUCKS1Q9H1E3 243 aaKnown RBP21.17■□□□□ 0.98
TOP3A-213ENST00000582230 IL21Q9HBE4 155 aa21.17■□□□□ 0.98
TOP3A-213ENST00000582230 ZFP37Q9Y6Q3 630 aaPredicted RBP21.17■□□□□ 0.98
TOP3A-213ENST00000582230 EYSQ5T1H1 3165 aa21.16■□□□□ 0.98
TOP3A-213ENST00000582230 AP5Z1O43299 807 aa21.16■□□□□ 0.98
TOP3A-213ENST00000582230 CCR2P41597 374 aa21.16■□□□□ 0.98
TOP3A-213ENST00000582230 USP46P62068 366 aa21.16■□□□□ 0.98
TOP3A-213ENST00000582230 TRIM14Q14142 442 aa21.16■□□□□ 0.98
TOP3A-213ENST00000582230 SLC5A9Q2M3M2 681 aa21.16■□□□□ 0.98
TOP3A-213ENST00000582230 ITFG1Q8TB96 612 aa21.16■□□□□ 0.98
TOP3A-213ENST00000582230 KCTD13Q8WZ19 329 aa21.16■□□□□ 0.98
TOP3A-213ENST00000582230 OVCA2Q8WZ82 227 aa21.16■□□□□ 0.98
TOP3A-213ENST00000582230 SECISBP2LQ93073 1101 aaKnown RBP21.16■□□□□ 0.98
TOP3A-213ENST00000582230 ACSF2Q96CM8 615 aaPredicted RBP21.16■□□□□ 0.98
TOP3A-213ENST00000582230 SLITRK1Q96PX8 696 aa21.16■□□□□ 0.98
TOP3A-213ENST00000582230 LHX5Q9H2C1 402 aa21.16■□□□□ 0.98
TOP3A-213ENST00000582230 ATXN3LQ9H3M9 355 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms