RNA–Protein interactions for RNA: ENST00000581003.5

CBX1-206, Transcript of chromobox 1, humanhuman

TSL 3

Gene CBX1, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-206ENST00000581003 JAKMIP2Q96AA8 810 aa13.38□□□□□ -0.27
CBX1-206ENST00000581003 CCDC34Q96HJ3 373 aa13.38□□□□□ -0.27
CBX1-206ENST00000581003 SPATA17Q96L03 361 aa13.38□□□□□ -0.27
CBX1-206ENST00000581003 SMOQ99835 787 aa13.38□□□□□ -0.27
CBX1-206ENST00000581003 MED10Q9BTT4 135 aa13.38□□□□□ -0.27
CBX1-206ENST00000581003 ELOVL4Q9GZR5 314 aa13.38□□□□□ -0.27
CBX1-206ENST00000581003 NIF3L1Q9GZT8 377 aa13.38□□□□□ -0.27
CBX1-206ENST00000581003 HPS4Q9NQG7 708 aa13.38□□□□□ -0.27
CBX1-206ENST00000581003 RBM12Q9NTZ6 932 aaKnown RBP13.38□□□□□ -0.27
CBX1-206ENST00000581003 GCNT4Q9P109 453 aa13.38□□□□□ -0.27
CBX1-206ENST00000581003 GREB1Q4ZG55 1949 aa13.37□□□□□ -0.27
CBX1-206ENST00000581003 DPYSL4O14531 572 aa13.37□□□□□ -0.27
CBX1-206ENST00000581003 ANXA13P27216 316 aa13.37□□□□□ -0.27
CBX1-206ENST00000581003 ADORA2BP29275 332 aa13.37□□□□□ -0.27
CBX1-206ENST00000581003 HOXD11P31277 338 aaPredicted RBP13.37□□□□□ -0.27
CBX1-206ENST00000581003 AVPR1AP37288 418 aa13.37□□□□□ -0.27
CBX1-206ENST00000581003 MRE11P49959 708 aa13.37□□□□□ -0.27
CBX1-206ENST00000581003 MCCD1P59942 119 aaPredicted RBP13.37□□□□□ -0.27
CBX1-206ENST00000581003 ZNF394Q53GI3 561 aa13.37□□□□□ -0.27
CBX1-206ENST00000581003 KRT39Q6A163 491 aa13.37□□□□□ -0.27
CBX1-206ENST00000581003 DENND5BQ6ZUT9 1274 aa13.37□□□□□ -0.27
CBX1-206ENST00000581003 FRMD5Q7Z6J6 570 aa13.37□□□□□ -0.27
CBX1-206ENST00000581003 BPIFB1Q8TDL5 484 aa13.37□□□□□ -0.27
CBX1-206ENST00000581003 NELFBQ8WX92 580 aa13.37□□□□□ -0.27
CBX1-206ENST00000581003 TAF4BQ92750 862 aa13.37□□□□□ -0.27
CBX1-206ENST00000581003 IRF7Q92985 503 aa13.37□□□□□ -0.27
CBX1-206ENST00000581003 SLC35C1Q96A29 364 aa13.37□□□□□ -0.27
CBX1-206ENST00000581003 C8orf48Q96LL4 319 aa13.37□□□□□ -0.27
CBX1-206ENST00000581003 MED15Q96RN5 788 aa13.37□□□□□ -0.27
CBX1-206ENST00000581003 TSG101Q99816 390 aa13.37□□□□□ -0.27
CBX1-206ENST00000581003 TTLL2Q9BWV7 592 aa13.37□□□□□ -0.27
CBX1-206ENST00000581003 DENND4CQ5VZ89 1909 aa13.37□□□□□ -0.27
CBX1-206ENST00000581003 TNFRSF10BO14763 440 aa13.36□□□□□ -0.27
CBX1-206ENST00000581003 TRIM66O15016 1216 aa13.36□□□□□ -0.27
CBX1-206ENST00000581003 CHADO15335 359 aa13.36□□□□□ -0.27
CBX1-206ENST00000581003 SLC16A3O15427 465 aaKnown RBP13.36□□□□□ -0.27
CBX1-206ENST00000581003 AP1G2O75843 785 aa13.36□□□□□ -0.27
CBX1-206ENST00000581003 CKMP06732 381 aa13.36□□□□□ -0.27
CBX1-206ENST00000581003 FAM163BP0C2L3 166 aa13.36□□□□□ -0.27
CBX1-206ENST00000581003 UBE2HP62256 183 aa13.36□□□□□ -0.27
CBX1-206ENST00000581003 FKBP3Q00688 224 aaKnown RBP13.36□□□□□ -0.27
CBX1-206ENST00000581003 INCA1Q0VD86 236 aa13.36□□□□□ -0.27
CBX1-206ENST00000581003 LRMPQ12912 555 aa13.36□□□□□ -0.27
CBX1-206ENST00000581003 TAF10Q12962 218 aa13.36□□□□□ -0.27
CBX1-206ENST00000581003 ZNF77Q15935 545 aa13.36□□□□□ -0.27
CBX1-206ENST00000581003 TSSK4Q6SA08 328 aa13.36□□□□□ -0.27
CBX1-206ENST00000581003 ZNF852Q6ZMS4 543 aa13.36□□□□□ -0.27
CBX1-206ENST00000581003 ELOA2Q8IYF1 753 aaPredicted RBP13.36□□□□□ -0.27
CBX1-206ENST00000581003 CELF5Q8N6W0 485 aaKnown RBP13.36□□□□□ -0.27
CBX1-206ENST00000581003 SHDQ96IW2 340 aa13.36□□□□□ -0.27
CBX1-206ENST00000581003 RNF38Q9H0F5 515 aa13.36□□□□□ -0.27
CBX1-206ENST00000581003 EBF3Q9H4W6 596 aa13.36□□□□□ -0.27
CBX1-206ENST00000581003 GKN1Q9NS71 199 aa13.36□□□□□ -0.27
CBX1-206ENST00000581003 TDP1Q9NUW8 608 aa13.36□□□□□ -0.27
CBX1-206ENST00000581003 C2orf42Q9NWW7 574 aa13.36□□□□□ -0.27
CBX1-206ENST00000581003 SMPD4Q9NXE4 827 aa13.36□□□□□ -0.27
CBX1-206ENST00000581003 HOOK1Q9UJC3 728 aaKnown RBP13.36□□□□□ -0.27
CBX1-206ENST00000581003 WNT6Q9Y6F9 365 aa13.36□□□□□ -0.27
CBX1-206ENST00000581003 R4GN57 208 aa13.36□□□□□ -0.27
CBX1-206ENST00000581003 PATJQ8NI35 1801 aa13.36□□□□□ -0.27
CBX1-206ENST00000581003 VPS13AQ96RL7 3174 aa13.35□□□□□ -0.27
CBX1-206ENST00000581003 ZNF840PA6NDX5 716 aa13.35□□□□□ -0.27
CBX1-206ENST00000581003 SPECC1L-ADORA2AF8WAN1 911 aa13.35□□□□□ -0.27
CBX1-206ENST00000581003 PSMA7O14818 248 aa13.35□□□□□ -0.27
CBX1-206ENST00000581003 CILPO75339 1184 aa13.35□□□□□ -0.27
CBX1-206ENST00000581003 ABL1P00519 1130 aa13.35□□□□□ -0.27
CBX1-206ENST00000581003 CALCAP01258 141 aa13.35□□□□□ -0.27
CBX1-206ENST00000581003 P4HA1P13674 534 aa13.35□□□□□ -0.27
CBX1-206ENST00000581003 WEE1P30291 646 aa13.35□□□□□ -0.27
CBX1-206ENST00000581003 ANP32AP39687 249 aaKnown RBP13.35□□□□□ -0.27
CBX1-206ENST00000581003 KPNA1P52294 538 aaPredicted RBP13.35□□□□□ -0.27
CBX1-206ENST00000581003 SLC5A3P53794 718 aa13.35□□□□□ -0.27
CBX1-206ENST00000581003 MAP3K7CLP57077 242 aa13.35□□□□□ -0.27
CBX1-206ENST00000581003 LRRC63Q05C16 580 aa13.35□□□□□ -0.27
CBX1-206ENST00000581003 USP4Q13107 963 aa13.35□□□□□ -0.27
CBX1-206ENST00000581003 GAS6Q14393 721 aa13.35□□□□□ -0.27
CBX1-206ENST00000581003 Q6ZS52 159 aa13.35□□□□□ -0.27
CBX1-206ENST00000581003 CRYBG2Q8N1P7 616 aa13.35□□□□□ -0.27
CBX1-206ENST00000581003 FBXL13Q8NEE6 735 aa13.35□□□□□ -0.27
CBX1-206ENST00000581003 CSGALNACT1Q8TDX6 532 aa13.35□□□□□ -0.27
CBX1-206ENST00000581003 SH3RF2Q8TEC5 729 aa13.35□□□□□ -0.27
CBX1-206ENST00000581003 FAM3CQ92520 227 aa13.35□□□□□ -0.27
CBX1-206ENST00000581003 DHTKD1Q96HY7 919 aaPredicted RBP13.35□□□□□ -0.27
CBX1-206ENST00000581003 TNIP3Q96KP6 325 aa13.35□□□□□ -0.27
CBX1-206ENST00000581003 PRRX2Q99811 253 aa13.35□□□□□ -0.27
CBX1-206ENST00000581003 FAM83CQ9BQN1 747 aa13.35□□□□□ -0.27
CBX1-206ENST00000581003 IMPG2Q9BZV3 1241 aa13.35□□□□□ -0.27
CBX1-206ENST00000581003 DMAP1Q9NPF5 467 aaPredicted RBP13.35□□□□□ -0.27
CBX1-206ENST00000581003 TRPV5Q9NQA5 729 aa13.35□□□□□ -0.27
CBX1-206ENST00000581003 RAB20Q9NX57 234 aa13.35□□□□□ -0.27
CBX1-206ENST00000581003 OBP2AQ9NY56 170 aa13.35□□□□□ -0.27
CBX1-206ENST00000581003 GMIPQ9P107 970 aa13.35□□□□□ -0.27
CBX1-206ENST00000581003 UXTQ9UBK9 157 aaPredicted RBP13.35□□□□□ -0.27
CBX1-206ENST00000581003 MIA3Q5JRA6 1907 aa13.35□□□□□ -0.27
CBX1-206ENST00000581003 TRAV19A0A0A6YYK7 116 aa13.34□□□□□ -0.27
CBX1-206ENST00000581003 ANTXRLA6NF34 631 aa13.34□□□□□ -0.27
CBX1-206ENST00000581003 HHLA1C9JL84 531 aa13.34□□□□□ -0.27
CBX1-206ENST00000581003 DDX6P26196 483 aaKnown RBP eCLIP13.34□□□□□ -0.27
CBX1-206ENST00000581003 GTF2H1P32780 548 aa13.34□□□□□ -0.27
CBX1-206ENST00000581003 CTHP32929 405 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms