RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 SETD7Q8WTS6 366 aaKnown RBP8.32□□□□□ -1.08
SMARCE1-217ENST00000580654 ZBTB45Q96K62 511 aaPredicted RBP8.32□□□□□ -1.08
SMARCE1-217ENST00000580654 NACC1Q96RE7 527 aa8.32□□□□□ -1.08
SMARCE1-217ENST00000580654 TARS2Q9BW92 718 aaKnown RBP8.32□□□□□ -1.08
SMARCE1-217ENST00000580654 AGXT2Q9BYV1 514 aa8.32□□□□□ -1.08
SMARCE1-217ENST00000580654 ZCWPW1Q9H0M4 648 aa8.32□□□□□ -1.08
SMARCE1-217ENST00000580654 PRDM16Q9HAZ2 1276 aa8.32□□□□□ -1.08
SMARCE1-217ENST00000580654 CD93Q9NPY3 652 aa8.32□□□□□ -1.08
SMARCE1-217ENST00000580654 CALCOCO1Q9P1Z2 691 aa8.32□□□□□ -1.08
SMARCE1-217ENST00000580654 HCN2Q9UL51 889 aa8.32□□□□□ -1.08
SMARCE1-217ENST00000580654 PCDHA12Q9UN75 941 aa8.32□□□□□ -1.08
SMARCE1-217ENST00000580654 BTBD3Q9Y2F9 522 aa8.32□□□□□ -1.08
SMARCE1-217ENST00000580654 PCDHB3Q9Y5E6 796 aa8.32□□□□□ -1.08
SMARCE1-217ENST00000580654 TCHHQ07283 1943 aa8.32□□□□□ -1.08
SMARCE1-217ENST00000580654 SCN1AP35498 2009 aa8.32□□□□□ -1.08
SMARCE1-217ENST00000580654 A0A0A0MRY4 1105 aa8.31□□□□□ -1.08
SMARCE1-217ENST00000580654 K7ERI5 159 aa8.31□□□□□ -1.08
SMARCE1-217ENST00000580654 PLK4O00444 970 aa8.31□□□□□ -1.08
SMARCE1-217ENST00000580654 WNT7AO00755 349 aa8.31□□□□□ -1.08
SMARCE1-217ENST00000580654 WISP1O95388 367 aa8.31□□□□□ -1.08
SMARCE1-217ENST00000580654 DEXIO95424 95 aa8.31□□□□□ -1.08
SMARCE1-217ENST00000580654 BAG4O95429 457 aaKnown RBP8.31□□□□□ -1.08
SMARCE1-217ENST00000580654 ZNF883P0CG24 379 aa8.31□□□□□ -1.08
SMARCE1-217ENST00000580654 MCF2P10911 925 aa8.31□□□□□ -1.08
SMARCE1-217ENST00000580654 MYO1EQ12965 1108 aa8.31□□□□□ -1.08
SMARCE1-217ENST00000580654 AAMPQ13685 434 aa8.31□□□□□ -1.08
SMARCE1-217ENST00000580654 PTPRNQ16849 979 aa8.31□□□□□ -1.08
SMARCE1-217ENST00000580654 HSF5Q4G112 596 aaPredicted RBP8.31□□□□□ -1.08
SMARCE1-217ENST00000580654 EOGTQ5NDL2 527 aa8.31□□□□□ -1.08
SMARCE1-217ENST00000580654 SDHAF4Q5VUM1 108 aa8.31□□□□□ -1.08
SMARCE1-217ENST00000580654 ARMCX5Q6P1M9 558 aa8.31□□□□□ -1.08
SMARCE1-217ENST00000580654 DSTYKQ6XUX3 929 aa8.31□□□□□ -1.08
SMARCE1-217ENST00000580654 APBB1IPQ7Z5R6 666 aaPredicted RBP8.31□□□□□ -1.08
SMARCE1-217ENST00000580654 CATSPER3Q86XQ3 398 aa8.31□□□□□ -1.08
SMARCE1-217ENST00000580654 FMNL3Q8IVF7 1028 aa8.31□□□□□ -1.08
SMARCE1-217ENST00000580654 FBXL16Q8N461 479 aa8.31□□□□□ -1.08
SMARCE1-217ENST00000580654 TTC16Q8NEE8 873 aa8.31□□□□□ -1.08
SMARCE1-217ENST00000580654 MRPS31Q92665 395 aaKnown RBP8.31□□□□□ -1.08
SMARCE1-217ENST00000580654 ZNF419Q96HQ0 510 aaPredicted RBP8.31□□□□□ -1.08
SMARCE1-217ENST00000580654 YTHDC1Q96MU7 727 aaKnown RBP8.31□□□□□ -1.08
SMARCE1-217ENST00000580654 PNMA5Q96PV4 448 aa8.31□□□□□ -1.08
SMARCE1-217ENST00000580654 TTC12Q9H892 705 aaPredicted RBP8.31□□□□□ -1.08
SMARCE1-217ENST00000580654 CD248Q9HCU0 757 aa8.31□□□□□ -1.08
SMARCE1-217ENST00000580654 GJB4Q9NTQ9 266 aa8.31□□□□□ -1.08
SMARCE1-217ENST00000580654 GCNT4Q9P109 453 aa8.31□□□□□ -1.08
SMARCE1-217ENST00000580654 FNDC3AQ9Y2H6 1198 aaKnown RBP8.31□□□□□ -1.08
SMARCE1-217ENST00000580654 PHLPP2Q6ZVD8 1323 aa8.3□□□□□ -1.08
SMARCE1-217ENST00000580654 B8ZZF3 427 aa8.3□□□□□ -1.08
SMARCE1-217ENST00000580654 E9PAM4 449 aa8.3□□□□□ -1.08
SMARCE1-217ENST00000580654 ERVH48-1M5A8F1 160 aa8.3□□□□□ -1.08
SMARCE1-217ENST00000580654 CILPO75339 1184 aa8.3□□□□□ -1.08
SMARCE1-217ENST00000580654 KAT7O95251 611 aa8.3□□□□□ -1.08
SMARCE1-217ENST00000580654 NFATC1O95644 943 aa8.3□□□□□ -1.08
SMARCE1-217ENST00000580654 CYP17A1P05093 508 aa8.3□□□□□ -1.08
SMARCE1-217ENST00000580654 HMGB1P09429 215 aaKnown RBP8.3□□□□□ -1.08
SMARCE1-217ENST00000580654 CXCL8P10145 99 aa8.3□□□□□ -1.08
SMARCE1-217ENST00000580654 HARSP12081 509 aaKnown RBP8.3□□□□□ -1.08
SMARCE1-217ENST00000580654 TCF3P15923 654 aa8.3□□□□□ -1.08
SMARCE1-217ENST00000580654 EVCP57679 992 aa8.3□□□□□ -1.08
SMARCE1-217ENST00000580654 LILRA4P59901 499 aa8.3□□□□□ -1.08
SMARCE1-217ENST00000580654 SSRP1Q08945 709 aaKnown RBP8.3□□□□□ -1.08
SMARCE1-217ENST00000580654 NR1H3Q13133 447 aa8.3□□□□□ -1.08
SMARCE1-217ENST00000580654 PPP2R5AQ15172 486 aa8.3□□□□□ -1.08
SMARCE1-217ENST00000580654 TAF12Q16514 161 aa8.3□□□□□ -1.08
SMARCE1-217ENST00000580654 SWT1Q5T5J6 900 aaKnown RBP8.3□□□□□ -1.08
SMARCE1-217ENST00000580654 MPZL3Q6UWV2 235 aa8.3□□□□□ -1.08
SMARCE1-217ENST00000580654 FAM177A1Q8N128 213 aaPredicted RBP8.3□□□□□ -1.08
SMARCE1-217ENST00000580654 PHTF2Q8N3S3 785 aa8.3□□□□□ -1.08
SMARCE1-217ENST00000580654 ARL14EPQ8N8R7 260 aaPredicted RBP8.3□□□□□ -1.08
SMARCE1-217ENST00000580654 SH3RF2Q8TEC5 729 aa8.3□□□□□ -1.08
SMARCE1-217ENST00000580654 SENP8Q96LD8 212 aa8.3□□□□□ -1.08
SMARCE1-217ENST00000580654 PI4K2AQ9BTU6 479 aa8.3□□□□□ -1.08
SMARCE1-217ENST00000580654 HAPLN2Q9GZV7 340 aa8.3□□□□□ -1.08
SMARCE1-217ENST00000580654 FAM124BQ9H5Z6 455 aaPredicted RBP8.3□□□□□ -1.08
SMARCE1-217ENST00000580654 GAREM1Q9H706 876 aa8.3□□□□□ -1.08
SMARCE1-217ENST00000580654 TMEM206Q9H813 350 aa8.3□□□□□ -1.08
SMARCE1-217ENST00000580654 TM7SF3Q9NS93 570 aa8.3□□□□□ -1.08
SMARCE1-217ENST00000580654 TMLHEQ9NVH6 421 aa8.3□□□□□ -1.08
SMARCE1-217ENST00000580654 MAGED2Q9UNF1 606 aaPredicted RBP8.3□□□□□ -1.08
SMARCE1-217ENST00000580654 STK36Q9NRP7 1315 aa8.29□□□□□ -1.08
SMARCE1-217ENST00000580654 A0A1W2PQF6 199 aa8.29□□□□□ -1.08
SMARCE1-217ENST00000580654 TTC26A0AVF1 554 aa8.29□□□□□ -1.08
SMARCE1-217ENST00000580654 C2orf78A6NCI8 922 aa8.29□□□□□ -1.08
SMARCE1-217ENST00000580654 CYP11A1P05108 521 aa8.29□□□□□ -1.08
SMARCE1-217ENST00000580654 USP17L7P0C7H9 530 aa8.29□□□□□ -1.08
SMARCE1-217ENST00000580654 HLA-EP13747 358 aa8.29□□□□□ -1.08
SMARCE1-217ENST00000580654 NDUFV2P19404 249 aa8.29□□□□□ -1.08
SMARCE1-217ENST00000580654 CYP3A5P20815 502 aa8.29□□□□□ -1.08
SMARCE1-217ENST00000580654 TXKP42681 527 aa8.29□□□□□ -1.08
SMARCE1-217ENST00000580654 CLDN6P56747 220 aa8.29□□□□□ -1.08
SMARCE1-217ENST00000580654 KDSRQ06136 332 aa8.29□□□□□ -1.08
SMARCE1-217ENST00000580654 KRT32Q14532 448 aa8.29□□□□□ -1.08
SMARCE1-217ENST00000580654 DHRS13Q6UX07 377 aa8.29□□□□□ -1.08
SMARCE1-217ENST00000580654 LRRC69Q6ZNQ3 347 aa8.29□□□□□ -1.08
SMARCE1-217ENST00000580654 MIB1Q86YT6 1006 aa8.29□□□□□ -1.08
SMARCE1-217ENST00000580654 TRIM22Q8IYM9 498 aa8.29□□□□□ -1.08
SMARCE1-217ENST00000580654 RGL4Q8IZJ4 473 aa8.29□□□□□ -1.08
SMARCE1-217ENST00000580654 SPPL2BQ8TCT7 592 aa8.29□□□□□ -1.08
SMARCE1-217ENST00000580654 RHBDD1Q8TEB9 315 aa8.29□□□□□ -1.08
SMARCE1-217ENST00000580654 C2orf15Q8WU43 125 aaKnown RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms