RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 PLXND1Q9Y4D7 1925 aa15.21■□□□□ 0.02
CSNK1D-213ENST00000580446 ABLIM1O14639 778 aa15.2■□□□□ 0.02
CSNK1D-213ENST00000580446 ZNF883P0CG24 379 aa15.2■□□□□ 0.02
CSNK1D-213ENST00000580446 CSNK1EP49674 416 aaKnown RBP15.2■□□□□ 0.02
CSNK1D-213ENST00000580446 ATP2C1P98194 919 aaPredicted RBP15.2■□□□□ 0.02
CSNK1D-213ENST00000580446 DHCR24Q15392 516 aa15.2■□□□□ 0.02
CSNK1D-213ENST00000580446 HES3Q5TGS1 186 aa15.2■□□□□ 0.02
CSNK1D-213ENST00000580446 DBX2Q6ZNG2 339 aa15.2■□□□□ 0.02
CSNK1D-213ENST00000580446 Q6ZUG5 572 aa15.2■□□□□ 0.02
CSNK1D-213ENST00000580446 PIK3AP1Q6ZUJ8 805 aa15.2■□□□□ 0.02
CSNK1D-213ENST00000580446 TAS1R3Q7RTX0 852 aa15.2■□□□□ 0.02
CSNK1D-213ENST00000580446 OXER1Q8TDS5 423 aa15.2■□□□□ 0.02
CSNK1D-213ENST00000580446 MED8Q96G25 268 aa15.2■□□□□ 0.02
CSNK1D-213ENST00000580446 ZFRQ96KR1 1074 aaKnown RBP15.2■□□□□ 0.02
CSNK1D-213ENST00000580446 SENP8Q96LD8 212 aa15.2■□□□□ 0.02
CSNK1D-213ENST00000580446 GPR174Q9BXC1 333 aa15.2■□□□□ 0.02
CSNK1D-213ENST00000580446 OXCT2Q9BYC2 517 aaPredicted RBP15.2■□□□□ 0.02
CSNK1D-213ENST00000580446 GJB4Q9NTQ9 266 aa15.2■□□□□ 0.02
CSNK1D-213ENST00000580446 ZMYM5Q9UJ78 669 aa15.2■□□□□ 0.02
CSNK1D-213ENST00000580446 CEP192Q8TEP8 1941 aa15.19■□□□□ 0.02
CSNK1D-213ENST00000580446 K7ERI5 159 aa15.19■□□□□ 0.02
CSNK1D-213ENST00000580446 ODC1P11926 461 aa15.19■□□□□ 0.02
CSNK1D-213ENST00000580446 GRIA2P42262 883 aa15.19■□□□□ 0.02
CSNK1D-213ENST00000580446 RCAN1P53805 252 aa15.19■□□□□ 0.02
CSNK1D-213ENST00000580446 CCDC142Q17RM4 750 aa15.19■□□□□ 0.02
CSNK1D-213ENST00000580446 KIF19Q2TAC6 998 aa15.19■□□□□ 0.02
CSNK1D-213ENST00000580446 SMPD4Q9NXE4 827 aa15.19■□□□□ 0.02
CSNK1D-213ENST00000580446 GCNT4Q9P109 453 aa15.19■□□□□ 0.02
CSNK1D-213ENST00000580446 HSFX1Q9UBD0 423 aa15.19■□□□□ 0.02
CSNK1D-213ENST00000580446 FTSJ1Q9UET6 329 aa15.19■□□□□ 0.02
CSNK1D-213ENST00000580446 HEMK1Q9Y5R4 338 aaPredicted RBP15.19■□□□□ 0.02
CSNK1D-213ENST00000580446 SNX11Q9Y5W9 270 aa15.19■□□□□ 0.02
CSNK1D-213ENST00000580446 STK36Q9NRP7 1315 aa15.18■□□□□ 0.02
CSNK1D-213ENST00000580446 TSC2P49815 1807 aa15.18■□□□□ 0.02
CSNK1D-213ENST00000580446 TBC1D3BA6NDS4 549 aa15.18■□□□□ 0.02
CSNK1D-213ENST00000580446 LEFTY2O00292 366 aa15.18■□□□□ 0.02
CSNK1D-213ENST00000580446 BCAT2O15382 392 aaPredicted RBP15.18■□□□□ 0.02
CSNK1D-213ENST00000580446 PRPF40AO75400 957 aaKnown RBP15.18■□□□□ 0.02
CSNK1D-213ENST00000580446 MED24O75448 989 aa15.18■□□□□ 0.02
CSNK1D-213ENST00000580446 SPATA31C1P0DKV0 1188 aa15.18■□□□□ 0.02
CSNK1D-213ENST00000580446 MCF2P10911 925 aa15.18■□□□□ 0.02
CSNK1D-213ENST00000580446 GP1BBP13224 206 aa15.18■□□□□ 0.02
CSNK1D-213ENST00000580446 NCAM1P13591 858 aa15.18■□□□□ 0.02
CSNK1D-213ENST00000580446 TYMPP19971 482 aa15.18■□□□□ 0.02
CSNK1D-213ENST00000580446 HNF1BP35680 557 aa15.18■□□□□ 0.02
CSNK1D-213ENST00000580446 EFNA5P52803 228 aa15.18■□□□□ 0.02
CSNK1D-213ENST00000580446 KCNB1Q14721 858 aa15.18■□□□□ 0.02
CSNK1D-213ENST00000580446 SAFBQ15424 915 aaKnown RBP eCLIP15.18■□□□□ 0.02
CSNK1D-213ENST00000580446 SF3A1Q15459 793 aaKnown RBP15.18■□□□□ 0.02
CSNK1D-213ENST00000580446 HSF5Q4G112 596 aaPredicted RBP15.18■□□□□ 0.02
CSNK1D-213ENST00000580446 PKDCCQ504Y2 493 aa15.18■□□□□ 0.02
CSNK1D-213ENST00000580446 C10orf76Q5T2E6 689 aa15.18■□□□□ 0.02
CSNK1D-213ENST00000580446 EGFLAMQ63HQ2 1017 aa15.18■□□□□ 0.02
CSNK1D-213ENST00000580446 RHBDF2Q6PJF5 856 aa15.18■□□□□ 0.02
CSNK1D-213ENST00000580446 PHTF2Q8N3S3 785 aa15.18■□□□□ 0.02
CSNK1D-213ENST00000580446 FOXJ1Q92949 421 aa15.18■□□□□ 0.02
CSNK1D-213ENST00000580446 WBP1Q96G27 269 aa15.18■□□□□ 0.02
CSNK1D-213ENST00000580446 TOE1Q96GM8 510 aaKnown RBP15.18■□□□□ 0.02
CSNK1D-213ENST00000580446 TMEM206Q9H813 350 aa15.18■□□□□ 0.02
CSNK1D-213ENST00000580446 EIF2B4Q9UI10 523 aaKnown RBP15.18■□□□□ 0.02
CSNK1D-213ENST00000580446 PCDHGB2Q9Y5G2 931 aa15.18■□□□□ 0.02
CSNK1D-213ENST00000580446 DOPEY1Q5JWR5 2465 aa15.18■□□□□ 0.02
CSNK1D-213ENST00000580446 CCDC169A6NNP5 214 aa15.17■□□□□ 0.02
CSNK1D-213ENST00000580446 ZNF217O75362 1048 aa15.17■□□□□ 0.02
CSNK1D-213ENST00000580446 BAG4O95429 457 aaKnown RBP15.17■□□□□ 0.02
CSNK1D-213ENST00000580446 GCFC2P16383 781 aaKnown RBP15.17■□□□□ 0.02
CSNK1D-213ENST00000580446 IFNAR1P17181 557 aa15.17■□□□□ 0.02
CSNK1D-213ENST00000580446 CYP11B2P19099 503 aa15.17■□□□□ 0.02
CSNK1D-213ENST00000580446 HDCP19113 662 aa15.17■□□□□ 0.02
CSNK1D-213ENST00000580446 LRPAP1P30533 357 aa15.17■□□□□ 0.02
CSNK1D-213ENST00000580446 TXKP42681 527 aa15.17■□□□□ 0.02
CSNK1D-213ENST00000580446 GRK6P43250 576 aa15.17■□□□□ 0.02
CSNK1D-213ENST00000580446 TMPRSS3P57727 454 aa15.17■□□□□ 0.02
CSNK1D-213ENST00000580446 RTP5Q14D33 572 aa15.17■□□□□ 0.02
CSNK1D-213ENST00000580446 C4orf17Q53FE4 359 aa15.17■□□□□ 0.02
CSNK1D-213ENST00000580446 DCAF12L1Q5VU92 463 aa15.17■□□□□ 0.02
CSNK1D-213ENST00000580446 CACUL1Q86Y37 369 aa15.17■□□□□ 0.02
CSNK1D-213ENST00000580446 IPO4Q8TEX9 1081 aaKnown RBP15.17■□□□□ 0.02
CSNK1D-213ENST00000580446 IFT74Q96LB3 600 aa15.17■□□□□ 0.02
CSNK1D-213ENST00000580446 FAM117AQ9C073 453 aa15.17■□□□□ 0.02
CSNK1D-213ENST00000580446 CD248Q9HCU0 757 aa15.17■□□□□ 0.02
CSNK1D-213ENST00000580446 ARHGEF35A5YM69 484 aa15.16■□□□□ 0.02
CSNK1D-213ENST00000580446 WNT7AO00755 349 aa15.16■□□□□ 0.02
CSNK1D-213ENST00000580446 TERTO14746 1132 aaKnown RBP15.16■□□□□ 0.02
CSNK1D-213ENST00000580446 CSH1P0DML2 217 aa15.16■□□□□ 0.02
CSNK1D-213ENST00000580446 CSH2P0DML3 217 aa15.16■□□□□ 0.02
CSNK1D-213ENST00000580446 ADH5P11766 374 aa15.16■□□□□ 0.02
CSNK1D-213ENST00000580446 TNFRSF4P43489 277 aa15.16■□□□□ 0.02
CSNK1D-213ENST00000580446 LILRA4P59901 499 aa15.16■□□□□ 0.02
CSNK1D-213ENST00000580446 PPP2R5AQ15172 486 aa15.16■□□□□ 0.02
CSNK1D-213ENST00000580446 TBC1D25Q3MII6 688 aa15.16■□□□□ 0.02
CSNK1D-213ENST00000580446 KCNT1Q5JUK3 1230 aa15.16■□□□□ 0.02
CSNK1D-213ENST00000580446 PRAMEF14Q5SWL7 426 aa15.16■□□□□ 0.02
CSNK1D-213ENST00000580446 MPZL3Q6UWV2 235 aa15.16■□□□□ 0.02
CSNK1D-213ENST00000580446 GATAD2AQ86YP4 633 aa15.16■□□□□ 0.02
CSNK1D-213ENST00000580446 SLFN12Q8IYM2 578 aa15.16■□□□□ 0.02
CSNK1D-213ENST00000580446 ADGRG2Q8IZP9 1017 aa15.16■□□□□ 0.02
CSNK1D-213ENST00000580446 DNASE2BQ8WZ79 361 aa15.16■□□□□ 0.02
CSNK1D-213ENST00000580446 SNX19Q92543 992 aa15.16■□□□□ 0.02
CSNK1D-213ENST00000580446 TSC1Q92574 1164 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms