RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 A0A1W2PQ64 194 aa15.45■□□□□ 0.06
SMARCE1-216ENST00000580419 A0A1W2PQD8 194 aa15.45■□□□□ 0.06
SMARCE1-216ENST00000580419 FAM92AA1XBS5 289 aa15.45■□□□□ 0.06
SMARCE1-216ENST00000580419 ATP2C2O75185 946 aa15.45■□□□□ 0.06
SMARCE1-216ENST00000580419 RHOBTB3O94955 611 aa15.45■□□□□ 0.06
SMARCE1-216ENST00000580419 RTN3O95197 1032 aaPredicted RBP15.45■□□□□ 0.06
SMARCE1-216ENST00000580419 C4BPAP04003 597 aaKnown RBP15.45■□□□□ 0.06
SMARCE1-216ENST00000580419 CKMP06732 381 aa15.45■□□□□ 0.06
SMARCE1-216ENST00000580419 RETP07949 1114 aa15.45■□□□□ 0.06
SMARCE1-216ENST00000580419 P4HA1P13674 534 aa15.45■□□□□ 0.06
SMARCE1-216ENST00000580419 PTPN1P18031 435 aaKnown RBP15.45■□□□□ 0.06
SMARCE1-216ENST00000580419 HDCP19113 662 aa15.45■□□□□ 0.06
SMARCE1-216ENST00000580419 BDNFP23560 247 aa15.45■□□□□ 0.06
SMARCE1-216ENST00000580419 AFMP43652 599 aa15.45■□□□□ 0.06
SMARCE1-216ENST00000580419 SOX9P48436 509 aa15.45■□□□□ 0.06
SMARCE1-216ENST00000580419 SATB1Q01826 763 aa15.45■□□□□ 0.06
SMARCE1-216ENST00000580419 NR1H3Q13133 447 aa15.45■□□□□ 0.06
SMARCE1-216ENST00000580419 KCNB1Q14721 858 aa15.45■□□□□ 0.06
SMARCE1-216ENST00000580419 PON2Q15165 354 aa15.45■□□□□ 0.06
SMARCE1-216ENST00000580419 SGSM1Q2NKQ1 1148 aa15.45■□□□□ 0.06
SMARCE1-216ENST00000580419 ZACNQ401N2 412 aa15.45■□□□□ 0.06
SMARCE1-216ENST00000580419 WDR5BQ86VZ2 330 aa15.45■□□□□ 0.06
SMARCE1-216ENST00000580419 NELFCDQ8IXH7 590 aa15.45■□□□□ 0.06
SMARCE1-216ENST00000580419 RDH13Q8NBN7 331 aa15.45■□□□□ 0.06
SMARCE1-216ENST00000580419 B3GALNT2Q8NCR0 500 aa15.45■□□□□ 0.06
SMARCE1-216ENST00000580419 PDZD8Q8NEN9 1154 aa15.45■□□□□ 0.06
SMARCE1-216ENST00000580419 CCDC127Q96BQ5 260 aa15.45■□□□□ 0.06
SMARCE1-216ENST00000580419 CHFRQ96EP1 664 aa15.45■□□□□ 0.06
SMARCE1-216ENST00000580419 LOXL4Q96JB6 756 aa15.45■□□□□ 0.06
SMARCE1-216ENST00000580419 TNIP3Q96KP6 325 aa15.45■□□□□ 0.06
SMARCE1-216ENST00000580419 SPATA32Q96LK8 384 aa15.45■□□□□ 0.06
SMARCE1-216ENST00000580419 ECT2Q9H8V3 914 aa15.45■□□□□ 0.06
SMARCE1-216ENST00000580419 SERTAD1Q9UHV2 236 aa15.45■□□□□ 0.06
SMARCE1-216ENST00000580419 GMEB2Q9UKD1 530 aa15.45■□□□□ 0.06
SMARCE1-216ENST00000580419 SPTBN2O15020 2390 aa15.44■□□□□ 0.06
SMARCE1-216ENST00000580419 ATP8B3O60423 1300 aa15.44■□□□□ 0.06
SMARCE1-216ENST00000580419 SDK1Q7Z5N4 2213 aa15.44■□□□□ 0.06
SMARCE1-216ENST00000580419 MYH10P35580 1976 aa15.44■□□□□ 0.06
SMARCE1-216ENST00000580419 NCOR2Q9Y618 2525 aa15.44■□□□□ 0.06
SMARCE1-216ENST00000580419 ZNF840PA6NDX5 716 aa15.44■□□□□ 0.06
SMARCE1-216ENST00000580419 SLC9A3R1O14745 358 aaPredicted RBP15.44■□□□□ 0.06
SMARCE1-216ENST00000580419 PFKFB1P16118 471 aa15.44■□□□□ 0.06
SMARCE1-216ENST00000580419 TGM1P22735 817 aa15.44■□□□□ 0.06
SMARCE1-216ENST00000580419 GRIK1P39086 918 aa15.44■□□□□ 0.06
SMARCE1-216ENST00000580419 TUBP50607 506 aa15.44■□□□□ 0.06
SMARCE1-216ENST00000580419 MYL6P60660 151 aa15.44■□□□□ 0.06
SMARCE1-216ENST00000580419 NCOA4Q13772 614 aa15.44■□□□□ 0.06
SMARCE1-216ENST00000580419 EML3Q32P44 896 aa15.44■□□□□ 0.06
SMARCE1-216ENST00000580419 KMT5BQ4FZB7 885 aa15.44■□□□□ 0.06
SMARCE1-216ENST00000580419 TSSK4Q6SA08 328 aa15.44■□□□□ 0.06
SMARCE1-216ENST00000580419 UNC93AQ86WB7 457 aa15.44■□□□□ 0.06
SMARCE1-216ENST00000580419 DDX42Q86XP3 938 aaKnown RBP eCLIP15.44■□□□□ 0.06
SMARCE1-216ENST00000580419 SCN4BQ8IWT1 228 aa15.44■□□□□ 0.06
SMARCE1-216ENST00000580419 OR6B3Q8NGW1 331 aa15.44■□□□□ 0.06
SMARCE1-216ENST00000580419 CCDC47Q96A33 483 aaKnown RBP15.44■□□□□ 0.06
SMARCE1-216ENST00000580419 CCDC34Q96HJ3 373 aa15.44■□□□□ 0.06
SMARCE1-216ENST00000580419 SLITRK1Q96PX8 696 aa15.44■□□□□ 0.06
SMARCE1-216ENST00000580419 MRPL45Q9BRJ2 306 aaKnown RBP15.44■□□□□ 0.06
SMARCE1-216ENST00000580419 EBF3Q9H4W6 596 aa15.44■□□□□ 0.06
SMARCE1-216ENST00000580419 TPRP12270 2363 aaKnown RBP15.43■□□□□ 0.06
SMARCE1-216ENST00000580419 KIAA1549LQ6ZVL6 1849 aa15.43■□□□□ 0.06
SMARCE1-216ENST00000580419 OTOL1A6NHN0 477 aaPredicted RBP15.43■□□□□ 0.06
SMARCE1-216ENST00000580419 LRRIQ3A6PVS8 624 aaPredicted RBP15.43■□□□□ 0.06
SMARCE1-216ENST00000580419 A8MXQ7 604 aa15.43■□□□□ 0.06
SMARCE1-216ENST00000580419 NFATC1O95644 943 aa15.43■□□□□ 0.06
SMARCE1-216ENST00000580419 OAS1P00973 400 aaKnown RBP15.43■□□□□ 0.06
SMARCE1-216ENST00000580419 PDGFRBP09619 1106 aa15.43■□□□□ 0.06
SMARCE1-216ENST00000580419 CASP1P29466 404 aa15.43■□□□□ 0.06
SMARCE1-216ENST00000580419 GJA4P35212 333 aa15.43■□□□□ 0.06
SMARCE1-216ENST00000580419 EIF2DP41214 584 aaKnown RBP15.43■□□□□ 0.06
SMARCE1-216ENST00000580419 SYKP43405 635 aa15.43■□□□□ 0.06
SMARCE1-216ENST00000580419 PSMC1P62191 440 aaKnown RBP15.43■□□□□ 0.06
SMARCE1-216ENST00000580419 CYP27A1Q02318 531 aa15.43■□□□□ 0.06
SMARCE1-216ENST00000580419 ZNF667Q5HYK9 610 aa15.43■□□□□ 0.06
SMARCE1-216ENST00000580419 SDHAF4Q5VUM1 108 aa15.43■□□□□ 0.06
SMARCE1-216ENST00000580419 TDRD10Q5VZ19 366 aaKnown RBP15.43■□□□□ 0.06
SMARCE1-216ENST00000580419 FSTL4Q6MZW2 842 aa15.43■□□□□ 0.06
SMARCE1-216ENST00000580419 KIAA2013Q8IYS2 634 aa15.43■□□□□ 0.06
SMARCE1-216ENST00000580419 CRYBG2Q8N1P7 616 aa15.43■□□□□ 0.06
SMARCE1-216ENST00000580419 RIN3Q8TB24 985 aa15.43■□□□□ 0.06
SMARCE1-216ENST00000580419 RMDN1Q96DB5 314 aa15.43■□□□□ 0.06
SMARCE1-216ENST00000580419 OTUB2Q96DC9 234 aa15.43■□□□□ 0.06
SMARCE1-216ENST00000580419 FAM84AQ96KN4 292 aa15.43■□□□□ 0.06
SMARCE1-216ENST00000580419 SLC22A12Q96S37 553 aa15.43■□□□□ 0.06
SMARCE1-216ENST00000580419 HINFPQ9BQA5 517 aa15.43■□□□□ 0.06
SMARCE1-216ENST00000580419 SMG9Q9H0W8 520 aaKnown RBP15.43■□□□□ 0.06
SMARCE1-216ENST00000580419 DUS2Q9NX74 493 aaKnown RBP15.43■□□□□ 0.06
SMARCE1-216ENST00000580419 FRMD4BQ9Y2L6 1034 aa15.43■□□□□ 0.06
SMARCE1-216ENST00000580419 NME7Q9Y5B8 376 aa15.43■□□□□ 0.06
SMARCE1-216ENST00000580419 MYO16Q9Y6X6 1858 aa15.43■□□□□ 0.06
SMARCE1-216ENST00000580419 MYO18AQ92614 2054 aaKnown RBP15.43■□□□□ 0.06
SMARCE1-216ENST00000580419 F8VP50 259 aa15.42■□□□□ 0.06
SMARCE1-216ENST00000580419 HCRTO43612 131 aa15.42■□□□□ 0.06
SMARCE1-216ENST00000580419 CALUO43852 315 aaPredicted RBP15.42■□□□□ 0.06
SMARCE1-216ENST00000580419 PHACTR2O75167 634 aa15.42■□□□□ 0.06
SMARCE1-216ENST00000580419 ASS1P00966 412 aaKnown RBP15.42■□□□□ 0.06
SMARCE1-216ENST00000580419 NR3C1P04150 777 aa15.42■□□□□ 0.06
SMARCE1-216ENST00000580419 TRIM21P19474 475 aaKnown RBP15.42■□□□□ 0.06
SMARCE1-216ENST00000580419 IFNAR2P48551 515 aa15.42■□□□□ 0.06
SMARCE1-216ENST00000580419 CCDC142Q17RM4 750 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms