RNA–Protein interactions for RNA: ENST00000580219.5

SNX11-206, Transcript of sorting nexin 11, humanhuman

TSL 2 BASIC

Gene SNX11, Length 1,200 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-206ENST00000580219 NPTXRO95502 500 aa10.39□□□□□ -0.75
SNX11-206ENST00000580219 ITGB3P05106 788 aa10.39□□□□□ -0.75
SNX11-206ENST00000580219 CALB1P05937 261 aa10.39□□□□□ -0.75
SNX11-206ENST00000580219 KRT19P08727 400 aa10.39□□□□□ -0.75
SNX11-206ENST00000580219 MMP8P22894 467 aa10.39□□□□□ -0.75
SNX11-206ENST00000580219 VSNL1P62760 191 aa10.39□□□□□ -0.75
SNX11-206ENST00000580219 DLX2Q07687 328 aaPredicted RBP10.39□□□□□ -0.75
SNX11-206ENST00000580219 INCA1Q0VD86 236 aa10.39□□□□□ -0.75
SNX11-206ENST00000580219 PTPROQ16827 1216 aa10.39□□□□□ -0.75
SNX11-206ENST00000580219 TRIM71Q2Q1W2 868 aaKnown RBP10.39□□□□□ -0.75
SNX11-206ENST00000580219 XKR4Q5GH76 650 aa10.39□□□□□ -0.75
SNX11-206ENST00000580219 NAA35Q5VZE5 725 aa10.39□□□□□ -0.75
SNX11-206ENST00000580219 C8orf74Q6P047 294 aa10.39□□□□□ -0.75
SNX11-206ENST00000580219 DCLK2Q8N568 766 aa10.39□□□□□ -0.75
SNX11-206ENST00000580219 LRRC52Q8N7C0 313 aa10.39□□□□□ -0.75
SNX11-206ENST00000580219 EIF1ADQ8N9N8 165 aaKnown RBP10.39□□□□□ -0.75
SNX11-206ENST00000580219 BEST2Q8NFU1 509 aa10.39□□□□□ -0.75
SNX11-206ENST00000580219 CD101Q93033 1021 aa10.39□□□□□ -0.75
SNX11-206ENST00000580219 ELMO3Q96BJ8 720 aa10.39□□□□□ -0.75
SNX11-206ENST00000580219 CYFIP2Q96F07 1278 aa10.39□□□□□ -0.75
SNX11-206ENST00000580219 MS4A14Q96JA4 679 aa10.39□□□□□ -0.75
SNX11-206ENST00000580219 ZSWIM1Q9BR11 485 aa10.39□□□□□ -0.75
SNX11-206ENST00000580219 PLVAPQ9BX97 442 aa10.39□□□□□ -0.75
SNX11-206ENST00000580219 LHX5Q9H2C1 402 aa10.39□□□□□ -0.75
SNX11-206ENST00000580219 EPC1Q9H2F5 836 aa10.39□□□□□ -0.75
SNX11-206ENST00000580219 CDHR5Q9HBB8 845 aa10.39□□□□□ -0.75
SNX11-206ENST00000580219 RBM12Q9NTZ6 932 aaKnown RBP10.39□□□□□ -0.75
SNX11-206ENST00000580219 ZNF446Q9NWS9 450 aa10.39□□□□□ -0.75
SNX11-206ENST00000580219 DPP3Q9NY33 737 aa10.39□□□□□ -0.75
SNX11-206ENST00000580219 ADAM22Q9P0K1 906 aa10.39□□□□□ -0.75
SNX11-206ENST00000580219 CNTN3Q9P232 1028 aa10.39□□□□□ -0.75
SNX11-206ENST00000580219 KIAA1257Q9ULG3 409 aa10.39□□□□□ -0.75
SNX11-206ENST00000580219 KCNE1P15382 129 aa10.38□□□□□ -0.75
SNX11-206ENST00000580219 COMTP21964 271 aa10.38□□□□□ -0.75
SNX11-206ENST00000580219 POLR2BP30876 1174 aaKnown RBP10.38□□□□□ -0.75
SNX11-206ENST00000580219 MAN1A1P33908 653 aa10.38□□□□□ -0.75
SNX11-206ENST00000580219 CTNNA1P35221 906 aaKnown RBP10.38□□□□□ -0.75
SNX11-206ENST00000580219 GSCP56915 257 aaPredicted RBP10.38□□□□□ -0.75
SNX11-206ENST00000580219 MYO1EQ12965 1108 aa10.38□□□□□ -0.75
SNX11-206ENST00000580219 PTP4A2Q12974 167 aa10.38□□□□□ -0.75
SNX11-206ENST00000580219 MESDQ14696 234 aa10.38□□□□□ -0.75
SNX11-206ENST00000580219 ZBTB6Q15916 424 aa10.38□□□□□ -0.75
SNX11-206ENST00000580219 LONRF2Q1L5Z9 754 aa10.38□□□□□ -0.75
SNX11-206ENST00000580219 WDR72Q3MJ13 1102 aa10.38□□□□□ -0.75
SNX11-206ENST00000580219 BEND6Q5SZJ8 279 aaPredicted RBP10.38□□□□□ -0.75
SNX11-206ENST00000580219 PLEKHA7Q6IQ23 1121 aa10.38□□□□□ -0.75
SNX11-206ENST00000580219 ALKAL1Q6UXT8 129 aa10.38□□□□□ -0.75
SNX11-206ENST00000580219 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.38□□□□□ -0.75
SNX11-206ENST00000580219 HPDLQ96IR7 371 aa10.38□□□□□ -0.75
SNX11-206ENST00000580219 CELF4Q9BZC1 486 aaKnown RBP10.38□□□□□ -0.75
SNX11-206ENST00000580219 TRIM6Q9C030 488 aaPredicted RBP10.38□□□□□ -0.75
SNX11-206ENST00000580219 GOLPH3Q9H4A6 298 aa10.38□□□□□ -0.75
SNX11-206ENST00000580219 SLITRK6Q9H5Y7 841 aa10.38□□□□□ -0.75
SNX11-206ENST00000580219 NPDC1Q9NQX5 325 aaPredicted RBP10.38□□□□□ -0.75
SNX11-206ENST00000580219 PARVAQ9NVD7 372 aa10.38□□□□□ -0.75
SNX11-206ENST00000580219 FAM53CQ9NYF3 392 aa10.38□□□□□ -0.75
SNX11-206ENST00000580219 OGFRQ9NZT2 677 aa10.38□□□□□ -0.75
SNX11-206ENST00000580219 STIM2Q9P246 746 aa10.38□□□□□ -0.75
SNX11-206ENST00000580219 NXF1Q9UBU9 619 aaKnown RBP10.38□□□□□ -0.75
SNX11-206ENST00000580219 STRIP2Q9ULQ0 834 aa10.38□□□□□ -0.75
SNX11-206ENST00000580219 UBQLN1Q9UMX0 589 aaKnown RBP10.38□□□□□ -0.75
SNX11-206ENST00000580219 NOC2LQ9Y3T9 749 aaKnown RBP10.38□□□□□ -0.75
SNX11-206ENST00000580219 PCDHA3Q9Y5H8 950 aa10.38□□□□□ -0.75
SNX11-206ENST00000580219 TRPV2Q9Y5S1 764 aa10.38□□□□□ -0.75
SNX11-206ENST00000580219 FANCMQ8IYD8 2048 aa10.38□□□□□ -0.75
SNX11-206ENST00000580219 USP9XQ93008 2570 aaPredicted RBP10.37□□□□□ -0.75
SNX11-206ENST00000580219 GOLGA6L10A0A0M3HER8 536 aa10.37□□□□□ -0.75
SNX11-206ENST00000580219 DCDC2BA2VCK2 349 aa10.37□□□□□ -0.75
SNX11-206ENST00000580219 LINC01553A4QN01 128 aa10.37□□□□□ -0.75
SNX11-206ENST00000580219 MYO1FO00160 1098 aa10.37□□□□□ -0.75
SNX11-206ENST00000580219 LAMA5O15230 3695 aa10.37□□□□□ -0.75
SNX11-206ENST00000580219 SPOPO43791 374 aa10.37□□□□□ -0.75
SNX11-206ENST00000580219 CILPO75339 1184 aa10.37□□□□□ -0.75
SNX11-206ENST00000580219 WEE2P0C1S8 567 aa10.37□□□□□ -0.75
SNX11-206ENST00000580219 VDRP11473 427 aa10.37□□□□□ -0.75
SNX11-206ENST00000580219 ATF7P17544 494 aaPredicted RBP10.37□□□□□ -0.75
SNX11-206ENST00000580219 CD58P19256 250 aa10.37□□□□□ -0.75
SNX11-206ENST00000580219 CYP3A5P20815 502 aa10.37□□□□□ -0.75
SNX11-206ENST00000580219 FGFR4P22455 802 aa10.37□□□□□ -0.75
SNX11-206ENST00000580219 RRM1P23921 792 aa10.37□□□□□ -0.75
SNX11-206ENST00000580219 PNPLA4P41247 253 aa10.37□□□□□ -0.75
SNX11-206ENST00000580219 PEX5P50542 639 aa10.37□□□□□ -0.75
SNX11-206ENST00000580219 DNA2P51530 1060 aa10.37□□□□□ -0.75
SNX11-206ENST00000580219 MRPS6P82932 125 aaKnown RBP10.37□□□□□ -0.75
SNX11-206ENST00000580219 MGAT3Q09327 533 aa10.37□□□□□ -0.75
SNX11-206ENST00000580219 TMEM62Q0P6H9 643 aa10.37□□□□□ -0.75
SNX11-206ENST00000580219 CBX2Q14781 532 aaPredicted RBP10.37□□□□□ -0.75
SNX11-206ENST00000580219 STILQ15468 1287 aa10.37□□□□□ -0.75
SNX11-206ENST00000580219 SCARA5Q6ZMJ2 495 aa10.37□□□□□ -0.75
SNX11-206ENST00000580219 CCNI2Q6ZMN8 369 aaPredicted RBP10.37□□□□□ -0.75
SNX11-206ENST00000580219 HDXQ7Z353 690 aa10.37□□□□□ -0.75
SNX11-206ENST00000580219 CPA5Q8WXQ8 436 aa10.37□□□□□ -0.75
SNX11-206ENST00000580219 KCTD12Q96CX2 325 aaKnown RBP10.37□□□□□ -0.75
SNX11-206ENST00000580219 TMEM176AQ96HP8 235 aa10.37□□□□□ -0.75
SNX11-206ENST00000580219 C17orf80Q9BSJ5 609 aa10.37□□□□□ -0.75
SNX11-206ENST00000580219 LRRC1Q9BTT6 524 aa10.37□□□□□ -0.75
SNX11-206ENST00000580219 DNAI2Q9GZS0 605 aa10.37□□□□□ -0.75
SNX11-206ENST00000580219 NSUN3Q9H649 340 aaKnown RBP10.37□□□□□ -0.75
SNX11-206ENST00000580219 CHST12Q9NRB3 414 aa10.37□□□□□ -0.75
SNX11-206ENST00000580219 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms