RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 FAM209AQ5JX71 171 aa6.92□□□□□ -1.3
COPS3-216ENST00000579716 ZNF771Q7L3S4 317 aaPredicted RBP6.92□□□□□ -1.3
COPS3-216ENST00000579716 SPATA21Q7Z572 469 aa6.92□□□□□ -1.3
COPS3-216ENST00000579716 COMTD1Q86VU5 262 aa6.92□□□□□ -1.3
COPS3-216ENST00000579716 NKAIN4Q8IVV8 208 aa6.92□□□□□ -1.3
COPS3-216ENST00000579716 CACNA2D3Q8IZS8 1091 aa6.92□□□□□ -1.3
COPS3-216ENST00000579716 TCP11L2Q8N4U5 519 aa6.92□□□□□ -1.3
COPS3-216ENST00000579716 C19orf47Q8N9M1 422 aaKnown RBP6.92□□□□□ -1.3
COPS3-216ENST00000579716 LILRB4Q8NHJ6 448 aa6.92□□□□□ -1.3
COPS3-216ENST00000579716 PIBF1Q8WXW3 757 aa6.92□□□□□ -1.3
COPS3-216ENST00000579716 INTS4Q96HW7 963 aaKnown RBP6.92□□□□□ -1.3
COPS3-216ENST00000579716 ACO2Q99798 780 aaKnown RBP6.92□□□□□ -1.3
COPS3-216ENST00000579716 G6PC3Q9BUM1 346 aa6.92□□□□□ -1.3
COPS3-216ENST00000579716 ERVMER34-1Q9H9K5 563 aa6.92□□□□□ -1.3
COPS3-216ENST00000579716 C17orf75Q9HAS0 396 aa6.92□□□□□ -1.3
COPS3-216ENST00000579716 GRHPRQ9UBQ7 328 aa6.92□□□□□ -1.3
COPS3-216ENST00000579716 DUSP13Q9UII6 198 aa6.92□□□□□ -1.3
COPS3-216ENST00000579716 PSME2Q9UL46 239 aa6.92□□□□□ -1.3
COPS3-216ENST00000579716 TMEM5Q9Y2B1 443 aa6.92□□□□□ -1.3
COPS3-216ENST00000579716 CORINQ9Y5Q5 1042 aa6.92□□□□□ -1.3
COPS3-216ENST00000579716 TRAV6A0A075B6T7 132 aa6.91□□□□□ -1.3
COPS3-216ENST00000579716 TEX51A0A1B0GUA7 166 aa6.91□□□□□ -1.3
COPS3-216ENST00000579716 hCG_1807616A0A1W2PRN6 198 aa6.91□□□□□ -1.3
COPS3-216ENST00000579716 ZSCAN5CA6NGD5 496 aaPredicted RBP6.91□□□□□ -1.3
COPS3-216ENST00000579716 CAPN8A6NHC0 703 aa6.91□□□□□ -1.3
COPS3-216ENST00000579716 NT5C1B-RDH14C9J2C7 533 aa6.91□□□□□ -1.3
COPS3-216ENST00000579716 FAM227AF5H4B4 570 aa6.91□□□□□ -1.3
COPS3-216ENST00000579716 NDUFS8O00217 210 aa6.91□□□□□ -1.3
COPS3-216ENST00000579716 E2F3O00716 465 aa6.91□□□□□ -1.3
COPS3-216ENST00000579716 APOL1O14791 398 aa6.91□□□□□ -1.3
COPS3-216ENST00000579716 NPC1O15118 1278 aa6.91□□□□□ -1.3
COPS3-216ENST00000579716 FFAR2O15552 330 aa6.91□□□□□ -1.3
COPS3-216ENST00000579716 BUB1O43683 1085 aa6.91□□□□□ -1.3
COPS3-216ENST00000579716 CYTH3O43739 400 aa6.91□□□□□ -1.3
COPS3-216ENST00000579716 FLOT1O75955 427 aa6.91□□□□□ -1.3
COPS3-216ENST00000579716 ASLP04424 464 aa6.91□□□□□ -1.3
COPS3-216ENST00000579716 PTPN2P17706 415 aa6.91□□□□□ -1.3
COPS3-216ENST00000579716 TFE3P19532 575 aaPredicted RBP6.91□□□□□ -1.3
COPS3-216ENST00000579716 RPL9P32969 192 aaKnown RBP6.91□□□□□ -1.3
COPS3-216ENST00000579716 CPA2P48052 419 aa6.91□□□□□ -1.3
COPS3-216ENST00000579716 CASP6P55212 293 aa6.91□□□□□ -1.3
COPS3-216ENST00000579716 DSTNP60981 165 aa6.91□□□□□ -1.3
COPS3-216ENST00000579716 ACTR1AP61163 376 aa6.91□□□□□ -1.3
COPS3-216ENST00000579716 FOXO1Q12778 655 aa6.91□□□□□ -1.3
COPS3-216ENST00000579716 CAMK2GQ13555 558 aaPredicted RBP6.91□□□□□ -1.3
COPS3-216ENST00000579716 CAMK2DQ13557 499 aa6.91□□□□□ -1.3
COPS3-216ENST00000579716 GALNT3Q14435 633 aa6.91□□□□□ -1.3
COPS3-216ENST00000579716 ZNF267Q14586 743 aaPredicted RBP6.91□□□□□ -1.3
COPS3-216ENST00000579716 ADIPOQQ15848 244 aa6.91□□□□□ -1.3
COPS3-216ENST00000579716 HADHQ16836 314 aaKnown RBP6.91□□□□□ -1.3
COPS3-216ENST00000579716 ERCC6LQ2NKX8 1250 aa6.91□□□□□ -1.3
COPS3-216ENST00000579716 TRIM71Q2Q1W2 868 aaKnown RBP6.91□□□□□ -1.3
COPS3-216ENST00000579716 FBXO43Q4G163 708 aa6.91□□□□□ -1.3
COPS3-216ENST00000579716 FAM209BQ5JX69 171 aa6.91□□□□□ -1.3
COPS3-216ENST00000579716 FBXO47Q5MNV8 452 aa6.91□□□□□ -1.3
COPS3-216ENST00000579716 OR7E24Q6IFN5 339 aa6.91□□□□□ -1.3
COPS3-216ENST00000579716 DENND5AQ6IQ26 1287 aa6.91□□□□□ -1.3
COPS3-216ENST00000579716 MEX3BQ6ZN04 569 aaKnown RBP6.91□□□□□ -1.3
COPS3-216ENST00000579716 ZNF600Q6ZNG1 722 aa6.91□□□□□ -1.3
COPS3-216ENST00000579716 LUZP1Q86V48 1076 aa6.91□□□□□ -1.3
COPS3-216ENST00000579716 LSRQ86X29 649 aaPredicted RBP6.91□□□□□ -1.3
COPS3-216ENST00000579716 ITPRIPQ8IWB1 547 aa6.91□□□□□ -1.3
COPS3-216ENST00000579716 THNSL1Q8IYQ7 743 aa6.91□□□□□ -1.3
COPS3-216ENST00000579716 REXO1Q8N1G1 1221 aaKnown RBP6.91□□□□□ -1.3
COPS3-216ENST00000579716 GALNT15Q8N3T1 639 aa6.91□□□□□ -1.3
COPS3-216ENST00000579716 RNF10Q8N5U6 811 aaKnown RBP6.91□□□□□ -1.3
COPS3-216ENST00000579716 C2orf69Q8N8R5 385 aa6.91□□□□□ -1.3
COPS3-216ENST00000579716 KCNH5Q8NCM2 988 aa6.91□□□□□ -1.3
COPS3-216ENST00000579716 SLC26A7Q8TE54 656 aa6.91□□□□□ -1.3
COPS3-216ENST00000579716 GRK7Q8WTQ7 553 aa6.91□□□□□ -1.3
COPS3-216ENST00000579716 LINC01599Q8WXQ3 324 aa6.91□□□□□ -1.3
COPS3-216ENST00000579716 HTRA1Q92743 480 aa6.91□□□□□ -1.3
COPS3-216ENST00000579716 INTS12Q96CB8 462 aaKnown RBP6.91□□□□□ -1.3
COPS3-216ENST00000579716 AHCYL2Q96HN2 611 aaKnown RBP6.91□□□□□ -1.3
COPS3-216ENST00000579716 MAML3Q96JK9 1138 aa6.91□□□□□ -1.3
COPS3-216ENST00000579716 CTAGE1Q96RT6 745 aa6.91□□□□□ -1.3
COPS3-216ENST00000579716 PHF20Q9BVI0 1012 aa6.91□□□□□ -1.3
COPS3-216ENST00000579716 STN1Q9H668 368 aaKnown RBP6.91□□□□□ -1.3
COPS3-216ENST00000579716 ZBTB40Q9NUA8 1239 aa6.91□□□□□ -1.3
COPS3-216ENST00000579716 ATAD3AQ9NVI7 634 aa6.91□□□□□ -1.3
COPS3-216ENST00000579716 GDAP2Q9NXN4 497 aa6.91□□□□□ -1.3
COPS3-216ENST00000579716 HMG20BQ9P0W2 317 aa6.91□□□□□ -1.3
COPS3-216ENST00000579716 FETUBQ9UGM5 382 aa6.91□□□□□ -1.3
COPS3-216ENST00000579716 BAG5Q9UL15 447 aa6.91□□□□□ -1.3
COPS3-216ENST00000579716 PADI4Q9UM07 663 aa6.91□□□□□ -1.3
COPS3-216ENST00000579716 TNPO3Q9Y5L0 923 aaKnown RBP6.91□□□□□ -1.3
COPS3-216ENST00000579716 ATP8B3O60423 1300 aa6.91□□□□□ -1.3
COPS3-216ENST00000579716 TRBV23-1A0A0A0MS06 115 aa6.9□□□□□ -1.3
COPS3-216ENST00000579716 SHISA3A0PJX4 238 aa6.9□□□□□ -1.3
COPS3-216ENST00000579716 CAPN14A8MX76 684 aa6.9□□□□□ -1.3
COPS3-216ENST00000579716 NDUFAB1O14561 156 aa6.9□□□□□ -1.3
COPS3-216ENST00000579716 NVLO15381 856 aaKnown RBP6.9□□□□□ -1.3
COPS3-216ENST00000579716 SMAD6O43541 496 aaKnown RBP6.9□□□□□ -1.3
COPS3-216ENST00000579716 ZNF189O75820 626 aaPredicted RBP6.9□□□□□ -1.3
COPS3-216ENST00000579716 TSPAN9O75954 239 aa6.9□□□□□ -1.3
COPS3-216ENST00000579716 KLHL18O94889 574 aa6.9□□□□□ -1.3
COPS3-216ENST00000579716 ECDO95905 644 aaPredicted RBP6.9□□□□□ -1.3
COPS3-216ENST00000579716 LRG1P02750 347 aa6.9□□□□□ -1.3
COPS3-216ENST00000579716 ENO2P09104 434 aaPredicted RBP6.9□□□□□ -1.3
COPS3-216ENST00000579716 DLDP09622 509 aaKnown RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms