RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 ADKP55263 362 aaKnown RBP11.92□□□□□ -0.5
CDK5RAP3-210ENST00000578733 TAF3Q5VWG9 929 aa11.92□□□□□ -0.5
CDK5RAP3-210ENST00000578733 IRF2BP2Q7Z5L9 587 aa11.92□□□□□ -0.5
CDK5RAP3-210ENST00000578733 ATAD1Q8NBU5 361 aa11.92□□□□□ -0.5
CDK5RAP3-210ENST00000578733 TMEM35BQ8NCS4 154 aa11.92□□□□□ -0.5
CDK5RAP3-210ENST00000578733 SLC7A14Q8TBB6 771 aa11.92□□□□□ -0.5
CDK5RAP3-210ENST00000578733 IPO4Q8TEX9 1081 aaKnown RBP11.92□□□□□ -0.5
CDK5RAP3-210ENST00000578733 SLC22A17Q8WUG5 538 aa11.92□□□□□ -0.5
CDK5RAP3-210ENST00000578733 SPATA17Q96L03 361 aa11.92□□□□□ -0.5
CDK5RAP3-210ENST00000578733 PANX2Q96RD6 677 aa11.92□□□□□ -0.5
CDK5RAP3-210ENST00000578733 UBXN6Q9BZV1 441 aa11.92□□□□□ -0.5
CDK5RAP3-210ENST00000578733 HAUS4Q9H6D7 363 aa11.92□□□□□ -0.5
CDK5RAP3-210ENST00000578733 SFXN1Q9H9B4 322 aa11.92□□□□□ -0.5
CDK5RAP3-210ENST00000578733 COMMD8Q9NX08 183 aa11.92□□□□□ -0.5
CDK5RAP3-210ENST00000578733 SLC27A5Q9Y2P5 690 aa11.92□□□□□ -0.5
CDK5RAP3-210ENST00000578733 YIPF1Q9Y548 306 aa11.92□□□□□ -0.5
CDK5RAP3-210ENST00000578733 INSL5Q9Y5Q6 135 aa11.92□□□□□ -0.5
CDK5RAP3-210ENST00000578733 REV3LO60673 3130 aa11.92□□□□□ -0.5
CDK5RAP3-210ENST00000578733 CLDN5O00501 218 aa11.91□□□□□ -0.5
CDK5RAP3-210ENST00000578733 ZMYND10O75800 440 aa11.91□□□□□ -0.5
CDK5RAP3-210ENST00000578733 RTN3O95197 1032 aaPredicted RBP11.91□□□□□ -0.5
CDK5RAP3-210ENST00000578733 PTMAP06454 111 aaKnown RBP11.91□□□□□ -0.5
CDK5RAP3-210ENST00000578733 POU2F2P09086 479 aa11.91□□□□□ -0.5
CDK5RAP3-210ENST00000578733 SPATA31D3P0C874 917 aa11.91□□□□□ -0.5
CDK5RAP3-210ENST00000578733 CSH1P0DML2 217 aa11.91□□□□□ -0.5
CDK5RAP3-210ENST00000578733 CSH2P0DML3 217 aa11.91□□□□□ -0.5
CDK5RAP3-210ENST00000578733 HOXB8P17481 243 aaPredicted RBP11.91□□□□□ -0.5
CDK5RAP3-210ENST00000578733 ACADSBP45954 432 aa11.91□□□□□ -0.5
CDK5RAP3-210ENST00000578733 MAP3K7CLP57077 242 aa11.91□□□□□ -0.5
CDK5RAP3-210ENST00000578733 TWF1Q12792 350 aa11.91□□□□□ -0.5
CDK5RAP3-210ENST00000578733 HYAL1Q12794 435 aa11.91□□□□□ -0.5
CDK5RAP3-210ENST00000578733 TMEM31Q5JXX7 168 aa11.91□□□□□ -0.5
CDK5RAP3-210ENST00000578733 CYP26C1Q6V0L0 522 aa11.91□□□□□ -0.5
CDK5RAP3-210ENST00000578733 TMEM184AQ6ZMB5 413 aa11.91□□□□□ -0.5
CDK5RAP3-210ENST00000578733 CLEC20AQ6ZU45 233 aa11.91□□□□□ -0.5
CDK5RAP3-210ENST00000578733 SPATA31D4Q6ZUB0 917 aa11.91□□□□□ -0.5
CDK5RAP3-210ENST00000578733 NOP9Q86U38 636 aaKnown RBP11.91□□□□□ -0.5
CDK5RAP3-210ENST00000578733 LEMD2Q8NC56 503 aa11.91□□□□□ -0.5
CDK5RAP3-210ENST00000578733 TFAP2BQ92481 460 aa11.91□□□□□ -0.5
CDK5RAP3-210ENST00000578733 SECISBP2LQ93073 1101 aaKnown RBP11.91□□□□□ -0.5
CDK5RAP3-210ENST00000578733 HSFY1Q96LI6 401 aa11.91□□□□□ -0.5
CDK5RAP3-210ENST00000578733 ZNF512Q96ME7 567 aaPredicted RBP11.91□□□□□ -0.5
CDK5RAP3-210ENST00000578733 LPIN3Q9BQK8 851 aa11.91□□□□□ -0.5
CDK5RAP3-210ENST00000578733 LRFN3Q9BTN0 628 aa11.91□□□□□ -0.5
CDK5RAP3-210ENST00000578733 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.91□□□□□ -0.5
CDK5RAP3-210ENST00000578733 LHX5Q9H2C1 402 aa11.91□□□□□ -0.5
CDK5RAP3-210ENST00000578733 SYNCQ9H7C4 482 aa11.91□□□□□ -0.5
CDK5RAP3-210ENST00000578733 PIDD1Q9HB75 910 aa11.91□□□□□ -0.5
CDK5RAP3-210ENST00000578733 CSNK1G1Q9HCP0 422 aa11.91□□□□□ -0.5
CDK5RAP3-210ENST00000578733 LUC7LQ9NQ29 371 aaKnown RBP11.91□□□□□ -0.5
CDK5RAP3-210ENST00000578733 CYLDQ9NQC7 956 aa11.91□□□□□ -0.5
CDK5RAP3-210ENST00000578733 UXTQ9UBK9 157 aaPredicted RBP11.91□□□□□ -0.5
CDK5RAP3-210ENST00000578733 NOCTQ9UK39 431 aaKnown RBP11.91□□□□□ -0.5
CDK5RAP3-210ENST00000578733 TCF20Q9UGU0 1960 aaKnown RBP11.9□□□□□ -0.5
CDK5RAP3-210ENST00000578733 SSU72P8A0A1W2PR75 194 aa11.9□□□□□ -0.5
CDK5RAP3-210ENST00000578733 F8VP50 259 aa11.9□□□□□ -0.5
CDK5RAP3-210ENST00000578733 IPO7O95373 1038 aaKnown RBP11.9□□□□□ -0.5
CDK5RAP3-210ENST00000578733 SEC24AO95486 1093 aa11.9□□□□□ -0.5
CDK5RAP3-210ENST00000578733 FGF19O95750 216 aa11.9□□□□□ -0.5
CDK5RAP3-210ENST00000578733 MMEP08473 750 aa11.9□□□□□ -0.5
CDK5RAP3-210ENST00000578733 CYLC1P35663 651 aaPredicted RBP11.9□□□□□ -0.5
CDK5RAP3-210ENST00000578733 NSFP46459 744 aaKnown RBP11.9□□□□□ -0.5
CDK5RAP3-210ENST00000578733 PLA2G4AP47712 749 aa11.9□□□□□ -0.5
CDK5RAP3-210ENST00000578733 CDK17Q00537 523 aa11.9□□□□□ -0.5
CDK5RAP3-210ENST00000578733 PDE4CQ08493 712 aa11.9□□□□□ -0.5
CDK5RAP3-210ENST00000578733 CCDC173Q0VFZ6 552 aa11.9□□□□□ -0.5
CDK5RAP3-210ENST00000578733 SKIV2LQ15477 1246 aaKnown RBP11.9□□□□□ -0.5
CDK5RAP3-210ENST00000578733 CCDC142Q17RM4 750 aa11.9□□□□□ -0.5
CDK5RAP3-210ENST00000578733 CES5AQ6NT32 575 aa11.9□□□□□ -0.5
CDK5RAP3-210ENST00000578733 EP400NLQ6ZTU2 488 aa11.9□□□□□ -0.5
CDK5RAP3-210ENST00000578733 DENND5BQ6ZUT9 1274 aa11.9□□□□□ -0.5
CDK5RAP3-210ENST00000578733 PAQR9Q6ZVX9 377 aa11.9□□□□□ -0.5
CDK5RAP3-210ENST00000578733 TMTC1Q8IUR5 882 aa11.9□□□□□ -0.5
CDK5RAP3-210ENST00000578733 PASD1Q8IV76 773 aa11.9□□□□□ -0.5
CDK5RAP3-210ENST00000578733 NUP93Q8N1F7 819 aa11.9□□□□□ -0.5
CDK5RAP3-210ENST00000578733 SIX6OS1Q8N1H7 587 aa11.9□□□□□ -0.5
CDK5RAP3-210ENST00000578733 TC2NQ8N9U0 490 aa11.9□□□□□ -0.5
CDK5RAP3-210ENST00000578733 CCDC112Q8NEF3 446 aa11.9□□□□□ -0.5
CDK5RAP3-210ENST00000578733 CMASQ8NFW8 434 aaPredicted RBP11.9□□□□□ -0.5
CDK5RAP3-210ENST00000578733 UBA3Q8TBC4 463 aa11.9□□□□□ -0.5
CDK5RAP3-210ENST00000578733 STK32AQ8WU08 396 aa11.9□□□□□ -0.5
CDK5RAP3-210ENST00000578733 SLC20A1Q8WUM9 679 aa11.9□□□□□ -0.5
CDK5RAP3-210ENST00000578733 PABPC5Q96DU9 382 aaKnown RBP11.9□□□□□ -0.5
CDK5RAP3-210ENST00000578733 CCDC42Q96M95 316 aa11.9□□□□□ -0.5
CDK5RAP3-210ENST00000578733 GCNAQ96QF7 691 aa11.9□□□□□ -0.5
CDK5RAP3-210ENST00000578733 FBXO44Q9H4M3 255 aa11.9□□□□□ -0.5
CDK5RAP3-210ENST00000578733 LRRC4Q9HBW1 653 aa11.9□□□□□ -0.5
CDK5RAP3-210ENST00000578733 ACP6Q9NPH0 428 aa11.9□□□□□ -0.5
CDK5RAP3-210ENST00000578733 ST7Q9NRC1 585 aa11.9□□□□□ -0.5
CDK5RAP3-210ENST00000578733 CLDND1Q9NY35 253 aa11.9□□□□□ -0.5
CDK5RAP3-210ENST00000578733 COG5Q9UP83 839 aa11.9□□□□□ -0.5
CDK5RAP3-210ENST00000578733 HELZP42694 1942 aaKnown RBP11.9□□□□□ -0.51
CDK5RAP3-210ENST00000578733 DOCK6Q96HP0 2047 aa11.89□□□□□ -0.51
CDK5RAP3-210ENST00000578733 DENND4AQ7Z401 1863 aa11.89□□□□□ -0.51
CDK5RAP3-210ENST00000578733 NUP210Q8TEM1 1887 aaPredicted RBP11.89□□□□□ -0.51
CDK5RAP3-210ENST00000578733 SART1O43290 800 aaKnown RBP11.89□□□□□ -0.51
CDK5RAP3-210ENST00000578733 AKR1B10O60218 316 aa11.89□□□□□ -0.51
CDK5RAP3-210ENST00000578733 VNN2O95498 520 aa11.89□□□□□ -0.51
CDK5RAP3-210ENST00000578733 SKILP12757 684 aa11.89□□□□□ -0.51
CDK5RAP3-210ENST00000578733 FMO1Q01740 532 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 254.7 ms