RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 PPM1LQ5SGD2 360 aa12.83□□□□□ -0.36
IFT20-207ENST00000578547 NAA35Q5VZE5 725 aa12.83□□□□□ -0.36
IFT20-207ENST00000578547 ELMSAN1Q6PJG2 1045 aa12.83□□□□□ -0.36
IFT20-207ENST00000578547 CCDC149Q6ZUS6 474 aa12.83□□□□□ -0.36
IFT20-207ENST00000578547 VPS36Q86VN1 386 aa12.83□□□□□ -0.36
IFT20-207ENST00000578547 TCEAL8Q8IYN2 117 aa12.83□□□□□ -0.36
IFT20-207ENST00000578547 GIPC2Q8TF65 315 aa12.83□□□□□ -0.36
IFT20-207ENST00000578547 CHP1Q99653 195 aa12.83□□□□□ -0.36
IFT20-207ENST00000578547 DUSP16Q9BY84 665 aa12.83□□□□□ -0.36
IFT20-207ENST00000578547 PCDHGC3Q9UN70 934 aa12.83□□□□□ -0.36
IFT20-207ENST00000578547 TMCO5BA8MYB1 307 aa12.82□□□□□ -0.36
IFT20-207ENST00000578547 PIK3R2O00459 728 aa12.82□□□□□ -0.36
IFT20-207ENST00000578547 LSM8O95777 96 aaKnown RBP12.82□□□□□ -0.36
IFT20-207ENST00000578547 LRG1P02750 347 aa12.82□□□□□ -0.36
IFT20-207ENST00000578547 SRGAP2BP0DMP2 458 aa12.82□□□□□ -0.36
IFT20-207ENST00000578547 ATF6P18850 670 aa12.82□□□□□ -0.36
IFT20-207ENST00000578547 RPL10AP62906 217 aaKnown RBP12.82□□□□□ -0.36
IFT20-207ENST00000578547 COL19A1Q14993 1142 aa12.82□□□□□ -0.36
IFT20-207ENST00000578547 VEPH1Q14D04 833 aa12.82□□□□□ -0.36
IFT20-207ENST00000578547 CTC1Q2NKJ3 1217 aa12.82□□□□□ -0.36
IFT20-207ENST00000578547 PKDCCQ504Y2 493 aa12.82□□□□□ -0.36
IFT20-207ENST00000578547 CYP26C1Q6V0L0 522 aa12.82□□□□□ -0.36
IFT20-207ENST00000578547 TMEM184AQ6ZMB5 413 aa12.82□□□□□ -0.36
IFT20-207ENST00000578547 TRIM72Q6ZMU5 477 aa12.82□□□□□ -0.36
IFT20-207ENST00000578547 TMEM35BQ8NCS4 154 aa12.82□□□□□ -0.36
IFT20-207ENST00000578547 ZMIZ2Q8NF64 920 aa12.82□□□□□ -0.36
IFT20-207ENST00000578547 OLIG1Q8TAK6 271 aa12.82□□□□□ -0.36
IFT20-207ENST00000578547 CPA5Q8WXQ8 436 aa12.82□□□□□ -0.36
IFT20-207ENST00000578547 PDLIM2Q96JY6 352 aa12.82□□□□□ -0.36
IFT20-207ENST00000578547 CCDC42Q96M95 316 aa12.82□□□□□ -0.36
IFT20-207ENST00000578547 PCDHB18PQ96TA0 734 aa12.82□□□□□ -0.36
IFT20-207ENST00000578547 BAG1Q99933 345 aaPredicted RBP12.82□□□□□ -0.36
IFT20-207ENST00000578547 SYT11Q9BT88 431 aa12.82□□□□□ -0.36
IFT20-207ENST00000578547 PLEKHA4Q9H4M7 779 aa12.82□□□□□ -0.36
IFT20-207ENST00000578547 NHEJ1Q9H9Q4 299 aaPredicted RBP12.82□□□□□ -0.36
IFT20-207ENST00000578547 ST7Q9NRC1 585 aa12.82□□□□□ -0.36
IFT20-207ENST00000578547 CLDND1Q9NY35 253 aa12.82□□□□□ -0.36
IFT20-207ENST00000578547 DPP7Q9UHL4 492 aa12.82□□□□□ -0.36
IFT20-207ENST00000578547 CYTH4Q9UIA0 394 aa12.82□□□□□ -0.36
IFT20-207ENST00000578547 MAFFQ9ULX9 164 aa12.82□□□□□ -0.36
IFT20-207ENST00000578547 SOWAHDA6NJG2 315 aa12.81□□□□□ -0.36
IFT20-207ENST00000578547 DDX3XO00571 662 aaKnown RBP eCLIP12.81□□□□□ -0.366e-11■■■■□ 22.8
IFT20-207ENST00000578547 XPO1O14980 1071 aaKnown RBP12.81□□□□□ -0.36
IFT20-207ENST00000578547 CCL16O15467 120 aa12.81□□□□□ -0.36
IFT20-207ENST00000578547 NCK2O43639 380 aa12.81□□□□□ -0.36
IFT20-207ENST00000578547 AKR1B10O60218 316 aa12.81□□□□□ -0.36
IFT20-207ENST00000578547 RFPL2O75678 378 aa12.81□□□□□ -0.36
IFT20-207ENST00000578547 ZMYND10O75800 440 aa12.81□□□□□ -0.36
IFT20-207ENST00000578547 LTBRP36941 435 aa12.81□□□□□ -0.36
IFT20-207ENST00000578547 GPD2P43304 727 aa12.81□□□□□ -0.36
IFT20-207ENST00000578547 KIF11P52732 1056 aa12.81□□□□□ -0.36
IFT20-207ENST00000578547 EPHB3P54753 998 aa12.81□□□□□ -0.36
IFT20-207ENST00000578547 NOMO3P69849 1222 aa12.81□□□□□ -0.36
IFT20-207ENST00000578547 DLX2Q07687 328 aaPredicted RBP12.81□□□□□ -0.36
IFT20-207ENST00000578547 PDCLQ13371 301 aa12.81□□□□□ -0.36
IFT20-207ENST00000578547 PLD1Q13393 1074 aa12.81□□□□□ -0.36
IFT20-207ENST00000578547 MTMR3Q13615 1198 aa12.81□□□□□ -0.36
IFT20-207ENST00000578547 CLEC16AQ2KHT3 1053 aa12.81□□□□□ -0.36
IFT20-207ENST00000578547 PMF1Q6P1K2 205 aa12.81□□□□□ -0.36
IFT20-207ENST00000578547 GPRIN1Q7Z2K8 1008 aa12.81□□□□□ -0.36
IFT20-207ENST00000578547 PIGZQ86VD9 579 aa12.81□□□□□ -0.36
IFT20-207ENST00000578547 C12orf76Q8N812 135 aaPredicted RBP12.81□□□□□ -0.36
IFT20-207ENST00000578547 SLC30A5Q8TAD4 765 aa12.81□□□□□ -0.36
IFT20-207ENST00000578547 FEZF2Q8TBJ5 459 aa12.81□□□□□ -0.36
IFT20-207ENST00000578547 HDAC7Q8WUI4 952 aa12.81□□□□□ -0.36
IFT20-207ENST00000578547 CASP10Q92851 521 aa12.81□□□□□ -0.36
IFT20-207ENST00000578547 PABPC5Q96DU9 382 aaKnown RBP12.81□□□□□ -0.36
IFT20-207ENST00000578547 C8orf48Q96LL4 319 aa12.81□□□□□ -0.36
IFT20-207ENST00000578547 NOX5Q96PH1 765 aa12.81□□□□□ -0.36
IFT20-207ENST00000578547 APOL5Q9BWW9 433 aa12.81□□□□□ -0.36
IFT20-207ENST00000578547 LHX5Q9H2C1 402 aa12.81□□□□□ -0.36
IFT20-207ENST00000578547 SYNCQ9H7C4 482 aa12.81□□□□□ -0.36
IFT20-207ENST00000578547 CSNK1G1Q9HCP0 422 aa12.81□□□□□ -0.36
IFT20-207ENST00000578547 CLEC1BQ9P126 229 aa12.81□□□□□ -0.36
IFT20-207ENST00000578547 HSFX1Q9UBD0 423 aa12.81□□□□□ -0.36
IFT20-207ENST00000578547 ADAMTS1Q9UHI8 967 aa12.81□□□□□ -0.36
IFT20-207ENST00000578547 MAGED2Q9UNF1 606 aaPredicted RBP12.81□□□□□ -0.36
IFT20-207ENST00000578547 MYH10P35580 1976 aa12.81□□□□□ -0.36
IFT20-207ENST00000578547 A0A087X0T9 212 aa12.8□□□□□ -0.36
IFT20-207ENST00000578547 SSU72P8A0A1W2PR75 194 aa12.8□□□□□ -0.36
IFT20-207ENST00000578547 SLC38A8A6NNN8 435 aa12.8□□□□□ -0.36
IFT20-207ENST00000578547 CYP1A1P04798 512 aaPredicted RBP12.8□□□□□ -0.36
IFT20-207ENST00000578547 FAM228BP0C875 321 aa12.8□□□□□ -0.36
IFT20-207ENST00000578547 LCP1P13796 627 aa12.8□□□□□ -0.36
IFT20-207ENST00000578547 NSFP46459 744 aaKnown RBP12.8□□□□□ -0.36
IFT20-207ENST00000578547 PLA2G4AP47712 749 aa12.8□□□□□ -0.36
IFT20-207ENST00000578547 SLC5A3P53794 718 aa12.8□□□□□ -0.36
IFT20-207ENST00000578547 CDK17Q00537 523 aa12.8□□□□□ -0.36
IFT20-207ENST00000578547 GFPT1Q06210 699 aaPredicted RBP12.8□□□□□ -0.36
IFT20-207ENST00000578547 ADIGQ0VDE8 80 aa12.8□□□□□ -0.36
IFT20-207ENST00000578547 SKIV2LQ15477 1246 aaKnown RBP12.8□□□□□ -0.36
IFT20-207ENST00000578547 TAF12Q16514 161 aa12.8□□□□□ -0.36
IFT20-207ENST00000578547 ANKRD54Q6NXT1 300 aa12.8□□□□□ -0.36
IFT20-207ENST00000578547 SYCE2Q6PIF2 218 aa12.8□□□□□ -0.36
IFT20-207ENST00000578547 DNAAF5Q86Y56 855 aa12.8□□□□□ -0.36
IFT20-207ENST00000578547 TMTC1Q8IUR5 882 aa12.8□□□□□ -0.36
IFT20-207ENST00000578547 SIX6OS1Q8N1H7 587 aa12.8□□□□□ -0.36
IFT20-207ENST00000578547 ELMOD1Q8N336 334 aa12.8□□□□□ -0.36
IFT20-207ENST00000578547 WDTC1Q8N5D0 677 aa12.8□□□□□ -0.36
IFT20-207ENST00000578547 MAFAQ8NHW3 353 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms