RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 TFDP2Q14188 446 aa9.79□□□□□ -0.84
CDK5RAP3-208ENST00000578525 LRRC14Q15048 493 aa9.79□□□□□ -0.84
CDK5RAP3-208ENST00000578525 NOMO1Q15155 1222 aa9.79□□□□□ -0.84
CDK5RAP3-208ENST00000578525 DUSP28Q4G0W2 176 aa9.79□□□□□ -0.84
CDK5RAP3-208ENST00000578525 FAM47CQ5HY64 1035 aa9.79□□□□□ -0.84
CDK5RAP3-208ENST00000578525 KCNT1Q5JUK3 1230 aa9.79□□□□□ -0.84
CDK5RAP3-208ENST00000578525 MAP1SQ66K74 1059 aaPredicted RBP9.79□□□□□ -0.84
CDK5RAP3-208ENST00000578525 FAM183BPQ6ZVS7 135 aa9.79□□□□□ -0.84
CDK5RAP3-208ENST00000578525 TRABD2AQ86V40 505 aa9.79□□□□□ -0.84
CDK5RAP3-208ENST00000578525 SRRM1Q8IYB3 904 aaKnown RBP9.79□□□□□ -0.84
CDK5RAP3-208ENST00000578525 OR6J1Q8NGC5 347 aa9.79□□□□□ -0.84
CDK5RAP3-208ENST00000578525 RXFP2Q8WXD0 754 aa9.79□□□□□ -0.84
CDK5RAP3-208ENST00000578525 CPT1BQ92523 772 aa9.79□□□□□ -0.84
CDK5RAP3-208ENST00000578525 HSPH1Q92598 858 aa9.79□□□□□ -0.84
CDK5RAP3-208ENST00000578525 USP6NLQ92738 828 aa9.79□□□□□ -0.84
CDK5RAP3-208ENST00000578525 SGSM3Q96HU1 749 aa9.79□□□□□ -0.84
CDK5RAP3-208ENST00000578525 SNX27Q96L92 541 aa9.79□□□□□ -0.84
CDK5RAP3-208ENST00000578525 MAGEB18Q96M61 343 aa9.79□□□□□ -0.84
CDK5RAP3-208ENST00000578525 PEBP4Q96S96 227 aa9.79□□□□□ -0.84
CDK5RAP3-208ENST00000578525 TUT1Q9H6E5 874 aaKnown RBP9.79□□□□□ -0.84
CDK5RAP3-208ENST00000578525 PLEKHA5Q9HAU0 1116 aa9.79□□□□□ -0.84
CDK5RAP3-208ENST00000578525 SENP1Q9P0U3 644 aa9.79□□□□□ -0.84
CDK5RAP3-208ENST00000578525 TBK1Q9UHD2 729 aa9.79□□□□□ -0.84
CDK5RAP3-208ENST00000578525 PCSK1NQ9UHG2 260 aa9.79□□□□□ -0.84
CDK5RAP3-208ENST00000578525 SLC24A2Q9UI40 661 aa9.79□□□□□ -0.84
CDK5RAP3-208ENST00000578525 TSPAN16Q9UKR8 245 aa9.79□□□□□ -0.84
CDK5RAP3-208ENST00000578525 ZMYND8Q9ULU4 1186 aaPredicted RBP9.79□□□□□ -0.84
CDK5RAP3-208ENST00000578525 USP18Q9UMW8 372 aa9.79□□□□□ -0.84
CDK5RAP3-208ENST00000578525 EVPLQ92817 2033 aa9.78□□□□□ -0.84
CDK5RAP3-208ENST00000578525 ZNF236Q9UL36 1845 aa9.78□□□□□ -0.84
CDK5RAP3-208ENST00000578525 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.78□□□□□ -0.84
CDK5RAP3-208ENST00000578525 CCL15-CCL14A0A0B4J2E2 113 aa9.78□□□□□ -0.84
CDK5RAP3-208ENST00000578525 FAM47DPA6NHR8 397 aa9.78□□□□□ -0.84
CDK5RAP3-208ENST00000578525 FOXO6A8MYZ6 492 aa9.78□□□□□ -0.84
CDK5RAP3-208ENST00000578525 RASA4BC9J798 803 aa9.78□□□□□ -0.84
CDK5RAP3-208ENST00000578525 BTBD19C9JJ37 291 aa9.78□□□□□ -0.84
CDK5RAP3-208ENST00000578525 E5RJQ4 531 aa9.78□□□□□ -0.84
CDK5RAP3-208ENST00000578525 E7ESA3 106 aa9.78□□□□□ -0.84
CDK5RAP3-208ENST00000578525 POC1B-GALNT4F8VUJ3 575 aa9.78□□□□□ -0.84
CDK5RAP3-208ENST00000578525 RASA4O43374 803 aa9.78□□□□□ -0.84
CDK5RAP3-208ENST00000578525 SNX3O60493 162 aa9.78□□□□□ -0.84
CDK5RAP3-208ENST00000578525 DNAJC8O75937 253 aaPredicted RBP9.78□□□□□ -0.84
CDK5RAP3-208ENST00000578525 PFKMP08237 780 aa9.78□□□□□ -0.84
CDK5RAP3-208ENST00000578525 CD48P09326 243 aa9.78□□□□□ -0.84
CDK5RAP3-208ENST00000578525 YBX3P16989 372 aaKnown RBP eCLIP9.78□□□□□ -0.84
CDK5RAP3-208ENST00000578525 SMPD1P17405 629 aa9.78□□□□□ -0.84
CDK5RAP3-208ENST00000578525 PHBP35232 272 aa9.78□□□□□ -0.84
CDK5RAP3-208ENST00000578525 SCTRP47872 440 aa9.78□□□□□ -0.84
CDK5RAP3-208ENST00000578525 GTF2A2P52657 109 aa9.78□□□□□ -0.84
CDK5RAP3-208ENST00000578525 SLC18A1P54219 525 aa9.78□□□□□ -0.84
CDK5RAP3-208ENST00000578525 GDF10P55107 478 aa9.78□□□□□ -0.84
CDK5RAP3-208ENST00000578525 CDH6P55285 790 aa9.78□□□□□ -0.84
CDK5RAP3-208ENST00000578525 CDC42EP1Q00587 391 aa9.78□□□□□ -0.84
CDK5RAP3-208ENST00000578525 ROR1Q01973 937 aa9.78□□□□□ -0.84
CDK5RAP3-208ENST00000578525 FASTKD3Q14CZ7 662 aaKnown RBP9.78□□□□□ -0.84
CDK5RAP3-208ENST00000578525 CCL15Q16663 113 aa9.78□□□□□ -0.84
CDK5RAP3-208ENST00000578525 HIF1AQ16665 826 aa9.78□□□□□ -0.84
CDK5RAP3-208ENST00000578525 EFHC2Q5JST6 749 aa9.78□□□□□ -0.84
CDK5RAP3-208ENST00000578525 MARCH8Q5T0T0 291 aa9.78□□□□□ -0.84
CDK5RAP3-208ENST00000578525 ANKRD22Q5VYY1 191 aa9.78□□□□□ -0.84
CDK5RAP3-208ENST00000578525 IQSEC1Q6DN90 963 aa9.78□□□□□ -0.84
CDK5RAP3-208ENST00000578525 TRNP1Q6NT89 227 aa9.78□□□□□ -0.84
CDK5RAP3-208ENST00000578525 CYP4V2Q6ZWL3 525 aaPredicted RBP9.78□□□□□ -0.84
CDK5RAP3-208ENST00000578525 DPH6Q7L8W6 267 aa9.78□□□□□ -0.84
CDK5RAP3-208ENST00000578525 UNC45BQ8IWX7 931 aa9.78□□□□□ -0.84
CDK5RAP3-208ENST00000578525 ZBED8Q8IZ13 594 aa9.78□□□□□ -0.84
CDK5RAP3-208ENST00000578525 NAT8LQ8N9F0 302 aa9.78□□□□□ -0.84
CDK5RAP3-208ENST00000578525 ATP11CQ8NB49 1132 aa9.78□□□□□ -0.84
CDK5RAP3-208ENST00000578525 BEST2Q8NFU1 509 aa9.78□□□□□ -0.84
CDK5RAP3-208ENST00000578525 GDAP1Q8TB36 358 aa9.78□□□□□ -0.84
CDK5RAP3-208ENST00000578525 TEKT4Q8WW24 435 aa9.78□□□□□ -0.84
CDK5RAP3-208ENST00000578525 NCAPGQ9BPX3 1015 aa9.78□□□□□ -0.84
CDK5RAP3-208ENST00000578525 PLCD4Q9BRC7 762 aa9.78□□□□□ -0.84
CDK5RAP3-208ENST00000578525 MAK16Q9BXY0 300 aaKnown RBP9.78□□□□□ -0.84
CDK5RAP3-208ENST00000578525 GCOM2Q9BZD3 368 aaPredicted RBP9.78□□□□□ -0.84
CDK5RAP3-208ENST00000578525 ADAMTS10Q9H324 1103 aa9.78□□□□□ -0.84
CDK5RAP3-208ENST00000578525 TRABDQ9H4I3 376 aa9.78□□□□□ -0.84
CDK5RAP3-208ENST00000578525 FETUBQ9UGM5 382 aa9.78□□□□□ -0.84
CDK5RAP3-208ENST00000578525 SMG5Q9UPR3 1016 aaKnown RBP9.78□□□□□ -0.84
CDK5RAP3-208ENST00000578525 USP15Q9Y4E8 981 aaPredicted RBP9.78□□□□□ -0.84
CDK5RAP3-208ENST00000578525 DNM1LO00429 736 aa9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 PRPF4O43172 522 aaKnown RBP eCLIP9.77□□□□□ -0.853e-8■□□□□ 10.6
CDK5RAP3-208ENST00000578525 PRPSAP2O60256 369 aa9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 SUN1O94901 812 aa9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 RBP3P10745 1247 aa9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 PDGFRAP16234 1089 aa9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 DESP17661 470 aa9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 TGM2P21980 687 aa9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 HNRNPH1P31943 449 aaKnown RBP9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 PSMC4P43686 418 aa9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 YARSP54577 528 aaKnown RBP9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 SNX16P57768 344 aa9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 GPX6P59796 221 aa9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 IL9RQ01113 521 aa9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 RNASELQ05823 741 aaKnown RBP9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 PDE4CQ08493 712 aa9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 ACVR2BQ13705 512 aa9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 DPYSL3Q14195 570 aa9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 GRB14Q14449 540 aa9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 KRT81Q14533 505 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms