RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 ZSCAN5CA6NGD5 496 aaPredicted RBP11.67□□□□□ -0.54
SKA2-204ENST00000578519 C2CD4BA6NLJ0 364 aa11.67□□□□□ -0.54
SKA2-204ENST00000578519 ZNF487B1APH4 448 aa11.67□□□□□ -0.54
SKA2-204ENST00000578519 KBTBD13C9JR72 458 aa11.67□□□□□ -0.54
SKA2-204ENST00000578519 E5RJQ4 531 aa11.67□□□□□ -0.54
SKA2-204ENST00000578519 XPO1O14980 1071 aaKnown RBP11.67□□□□□ -0.54
SKA2-204ENST00000578519 FKTNO75072 461 aa11.67□□□□□ -0.54
SKA2-204ENST00000578519 AOC2O75106 756 aa11.67□□□□□ -0.54
SKA2-204ENST00000578519 LRCH4O75427 683 aa11.67□□□□□ -0.54
SKA2-204ENST00000578519 TRPA1O75762 1119 aa11.67□□□□□ -0.54
SKA2-204ENST00000578519 FBXO21O94952 628 aa11.67□□□□□ -0.54
SKA2-204ENST00000578519 TRUB2O95900 331 aaKnown RBP11.67□□□□□ -0.54
SKA2-204ENST00000578519 EOMESO95936 686 aa11.67□□□□□ -0.54
SKA2-204ENST00000578519 PDGFRBP09619 1106 aa11.67□□□□□ -0.54
SKA2-204ENST00000578519 CTSHP09668 335 aa11.67□□□□□ -0.54
SKA2-204ENST00000578519 FAM153BP0C7A2 387 aa11.67□□□□□ -0.54
SKA2-204ENST00000578519 ODC1P11926 461 aa11.67□□□□□ -0.54
SKA2-204ENST00000578519 RARGP13631 454 aa11.67□□□□□ -0.54
SKA2-204ENST00000578519 PTPN1P18031 435 aaKnown RBP11.67□□□□□ -0.54
SKA2-204ENST00000578519 KDELR1P24390 212 aa11.67□□□□□ -0.54
SKA2-204ENST00000578519 PTPN9P43378 593 aa11.67□□□□□ -0.54
SKA2-204ENST00000578519 APLP1P51693 650 aa11.67□□□□□ -0.54
SKA2-204ENST00000578519 ACLYP53396 1101 aa11.67□□□□□ -0.54
SKA2-204ENST00000578519 PMS2P54278 862 aa11.67□□□□□ -0.54
SKA2-204ENST00000578519 PLCB3Q01970 1234 aa11.67□□□□□ -0.54
SKA2-204ENST00000578519 PDE4CQ08493 712 aa11.67□□□□□ -0.54
SKA2-204ENST00000578519 GRIK3Q13003 919 aa11.67□□□□□ -0.54
SKA2-204ENST00000578519 SNX1Q13596 522 aa11.67□□□□□ -0.54
SKA2-204ENST00000578519 BYSLQ13895 437 aaKnown RBP11.67□□□□□ -0.54
SKA2-204ENST00000578519 KRT81Q14533 505 aa11.67□□□□□ -0.54
SKA2-204ENST00000578519 MAPRE1Q15691 268 aaKnown RBP11.67□□□□□ -0.54
SKA2-204ENST00000578519 FAM153CQ494X1 144 aa11.67□□□□□ -0.54
SKA2-204ENST00000578519 KAZNQ674X7 775 aa11.67□□□□□ -0.54
SKA2-204ENST00000578519 DENND2CQ68D51 928 aa11.67□□□□□ -0.54
SKA2-204ENST00000578519 LLGL2Q6P1M3 1020 aa11.67□□□□□ -0.54
SKA2-204ENST00000578519 FAM183BPQ6ZVS7 135 aa11.67□□□□□ -0.54
SKA2-204ENST00000578519 TMC3Q7Z5M5 1100 aa11.67□□□□□ -0.54
SKA2-204ENST00000578519 DDX42Q86XP3 938 aaKnown RBP eCLIP11.67□□□□□ -0.54
SKA2-204ENST00000578519 THEM5Q8N1Q8 247 aa11.67□□□□□ -0.54
SKA2-204ENST00000578519 B3GALNT2Q8NCR0 500 aa11.67□□□□□ -0.54
SKA2-204ENST00000578519 CMASQ8NFW8 434 aaPredicted RBP11.67□□□□□ -0.54
SKA2-204ENST00000578519 CD99L2Q8TCZ2 262 aa11.67□□□□□ -0.54
SKA2-204ENST00000578519 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.67□□□□□ -0.54
SKA2-204ENST00000578519 ART4Q93070 314 aa11.67□□□□□ -0.54
SKA2-204ENST00000578519 SENP8Q96LD8 212 aa11.67□□□□□ -0.54
SKA2-204ENST00000578519 ZIM3Q96PE6 472 aa11.67□□□□□ -0.54
SKA2-204ENST00000578519 SH3GL2Q99962 352 aa11.67□□□□□ -0.54
SKA2-204ENST00000578519 CCDC77Q9BR77 488 aa11.67□□□□□ -0.54
SKA2-204ENST00000578519 MED10Q9BTT4 135 aa11.67□□□□□ -0.54
SKA2-204ENST00000578519 TRIM62Q9BVG3 475 aa11.67□□□□□ -0.54
SKA2-204ENST00000578519 FTHL17Q9BXU8 183 aa11.67□□□□□ -0.54
SKA2-204ENST00000578519 ZWILCHQ9H900 591 aa11.67□□□□□ -0.54
SKA2-204ENST00000578519 LRRC4Q9HBW1 653 aa11.67□□□□□ -0.54
SKA2-204ENST00000578519 KANSL3Q9P2N6 904 aa11.67□□□□□ -0.54
SKA2-204ENST00000578519 FAM153AQ9UHL3 310 aa11.67□□□□□ -0.54
SKA2-204ENST00000578519 CYTH4Q9UIA0 394 aa11.67□□□□□ -0.54
SKA2-204ENST00000578519 ADAM21Q9UKJ8 722 aa11.67□□□□□ -0.54
SKA2-204ENST00000578519 CDH9Q9ULB4 789 aa11.67□□□□□ -0.54
SKA2-204ENST00000578519 PLAAQ9Y263 795 aa11.67□□□□□ -0.54
SKA2-204ENST00000578519 FAN1Q9Y2M0 1017 aa11.67□□□□□ -0.54
SKA2-204ENST00000578519 PTPN22Q9Y2R2 807 aa11.67□□□□□ -0.54
SKA2-204ENST00000578519 PTCH2Q9Y6C5 1203 aa11.67□□□□□ -0.54
SKA2-204ENST00000578519 RALGAPA2Q2PPJ7 1873 aa11.67□□□□□ -0.54
SKA2-204ENST00000578519 ANK1P16157 1881 aa11.66□□□□□ -0.54
SKA2-204ENST00000578519 H3BQF6 201 aa11.66□□□□□ -0.54
SKA2-204ENST00000578519 PPEF2O14830 753 aa11.66□□□□□ -0.54
SKA2-204ENST00000578519 GJB6O95452 261 aa11.66□□□□□ -0.54
SKA2-204ENST00000578519 SYF2O95926 243 aaKnown RBP11.66□□□□□ -0.54
SKA2-204ENST00000578519 KRT14P02533 472 aa11.66□□□□□ -0.54
SKA2-204ENST00000578519 ITGAVP06756 1048 aa11.66□□□□□ -0.54
SKA2-204ENST00000578519 COL6A1P12109 1028 aa11.66□□□□□ -0.54
SKA2-204ENST00000578519 ELNP15502 786 aa11.66□□□□□ -0.54
SKA2-204ENST00000578519 ADORA2BP29275 332 aa11.66□□□□□ -0.54
SKA2-204ENST00000578519 MIPP30301 263 aa11.66□□□□□ -0.54
SKA2-204ENST00000578519 ACTN2P35609 894 aa11.66□□□□□ -0.54
SKA2-204ENST00000578519 HSD17B3P37058 310 aa11.66□□□□□ -0.54
SKA2-204ENST00000578519 CDKN2BP42772 138 aa11.66□□□□□ -0.54
SKA2-204ENST00000578519 RPL34P49207 117 aaKnown RBP11.66□□□□□ -0.54
SKA2-204ENST00000578519 AGBL2Q5U5Z8 902 aa11.66□□□□□ -0.54
SKA2-204ENST00000578519 TTC27Q6P3X3 843 aa11.66□□□□□ -0.54
SKA2-204ENST00000578519 MFSD7Q6UXD7 560 aa11.66□□□□□ -0.54
SKA2-204ENST00000578519 C4orf22Q6V702 233 aa11.66□□□□□ -0.54
SKA2-204ENST00000578519 BBS12Q6ZW61 710 aa11.66□□□□□ -0.54
SKA2-204ENST00000578519 BZW1Q7L1Q6 419 aaKnown RBP11.66□□□□□ -0.54
SKA2-204ENST00000578519 SLC26A9Q7LBE3 791 aa11.66□□□□□ -0.54
SKA2-204ENST00000578519 CPNE8Q86YQ8 564 aa11.66□□□□□ -0.54
SKA2-204ENST00000578519 RFX6Q8HWS3 928 aa11.66□□□□□ -0.54
SKA2-204ENST00000578519 C12orf29Q8N999 325 aa11.66□□□□□ -0.54
SKA2-204ENST00000578519 TSEN2Q8NCE0 465 aaKnown RBP11.66□□□□□ -0.54
SKA2-204ENST00000578519 JOSD2Q8TAC2 188 aa11.66□□□□□ -0.54
SKA2-204ENST00000578519 URGCPQ8TCY9 931 aa11.66□□□□□ -0.54
SKA2-204ENST00000578519 PPP1R13LQ8WUF5 828 aa11.66□□□□□ -0.54
SKA2-204ENST00000578519 RSPH1Q8WYR4 309 aa11.66□□□□□ -0.54
SKA2-204ENST00000578519 KCTD13Q8WZ19 329 aa11.66□□□□□ -0.54
SKA2-204ENST00000578519 NKD2Q969F2 451 aaPredicted RBP11.66□□□□□ -0.54
SKA2-204ENST00000578519 HAUS1Q96CS2 278 aa11.66□□□□□ -0.54
SKA2-204ENST00000578519 GAD1Q99259 594 aa11.66□□□□□ -0.54
SKA2-204ENST00000578519 FERMT1Q9BQL6 677 aa11.66□□□□□ -0.54
SKA2-204ENST00000578519 DUSP16Q9BY84 665 aa11.66□□□□□ -0.54
SKA2-204ENST00000578519 PABPC3Q9H361 631 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms