RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 KCNQ2O43526 872 aa13.62□□□□□ -0.23
PCDHGB3-201ENST00000576222 TBC1D12O60347 775 aa13.62□□□□□ -0.23
PCDHGB3-201ENST00000576222 TRIM16O95361 564 aa13.62□□□□□ -0.23
PCDHGB3-201ENST00000576222 MAP3K6O95382 1288 aa13.62□□□□□ -0.23
PCDHGB3-201ENST00000576222 APOA1P02647 267 aa13.62□□□□□ -0.23
PCDHGB3-201ENST00000576222 SLC4A1P02730 911 aa13.62□□□□□ -0.23
PCDHGB3-201ENST00000576222 LBRQ14739 615 aaKnown RBP13.62□□□□□ -0.23
PCDHGB3-201ENST00000576222 BOLA3Q53S33 107 aa13.62□□□□□ -0.23
PCDHGB3-201ENST00000576222 ABRAQ8N0Z2 381 aa13.62□□□□□ -0.23
PCDHGB3-201ENST00000576222 CLEC4FQ8N1N0 589 aa13.62□□□□□ -0.23
PCDHGB3-201ENST00000576222 APBB2Q92870 758 aa13.62□□□□□ -0.23
PCDHGB3-201ENST00000576222 ZNF669Q96BR6 464 aaPredicted RBP13.62□□□□□ -0.23
PCDHGB3-201ENST00000576222 ECSITQ9BQ95 431 aa13.62□□□□□ -0.23
PCDHGB3-201ENST00000576222 C10orf88Q9H8K7 445 aa13.62□□□□□ -0.23
PCDHGB3-201ENST00000576222 JPH1Q9HDC5 661 aaPredicted RBP13.62□□□□□ -0.23
PCDHGB3-201ENST00000576222 ATP11BQ9Y2G3 1177 aa13.62□□□□□ -0.23
PCDHGB3-201ENST00000576222 MST1RQ04912 1400 aa13.61□□□□□ -0.23
PCDHGB3-201ENST00000576222 CCDC78A2IDD5 438 aa13.61□□□□□ -0.23
PCDHGB3-201ENST00000576222 KBTBD13C9JR72 458 aa13.61□□□□□ -0.23
PCDHGB3-201ENST00000576222 UPP2O95045 317 aa13.61□□□□□ -0.23
PCDHGB3-201ENST00000576222 PGM3O95394 542 aa13.61□□□□□ -0.23
PCDHGB3-201ENST00000576222 ARP10275 920 aa13.61□□□□□ -0.23
PCDHGB3-201ENST00000576222 CHN2P52757 468 aa13.61□□□□□ -0.23
PCDHGB3-201ENST00000576222 UGP2Q16851 508 aa13.61□□□□□ -0.23
PCDHGB3-201ENST00000576222 C6orf89Q6UWU4 347 aa13.61□□□□□ -0.23
PCDHGB3-201ENST00000576222 RIPOR1Q6ZS17 1223 aa13.61□□□□□ -0.23
PCDHGB3-201ENST00000576222 ADCK1Q86TW2 530 aa13.61□□□□□ -0.23
PCDHGB3-201ENST00000576222 CDR2LQ86X02 465 aaPredicted RBP13.61□□□□□ -0.23
PCDHGB3-201ENST00000576222 NUP93Q8N1F7 819 aa13.61□□□□□ -0.23
PCDHGB3-201ENST00000576222 BBS5Q8N3I7 341 aa13.61□□□□□ -0.23
PCDHGB3-201ENST00000576222 ZNF483Q8TF39 744 aaPredicted RBP13.61□□□□□ -0.23
PCDHGB3-201ENST00000576222 WDR60Q8WVS4 1066 aa13.61□□□□□ -0.23
PCDHGB3-201ENST00000576222 TARS2Q9BW92 718 aaKnown RBP13.61□□□□□ -0.23
PCDHGB3-201ENST00000576222 NRDE2Q9H7Z3 1164 aa13.61□□□□□ -0.23
PCDHGB3-201ENST00000576222 ACP6Q9NPH0 428 aa13.61□□□□□ -0.23
PCDHGB3-201ENST00000576222 AGLP35573 1532 aa13.61□□□□□ -0.23
PCDHGB3-201ENST00000576222 ETS2P15036 469 aa13.61□□□□□ -0.23
PCDHGB3-201ENST00000576222 C1QBPQ07021 282 aaKnown RBP13.61□□□□□ -0.23
PCDHGB3-201ENST00000576222 ISLR2Q6UXK2 745 aa13.61□□□□□ -0.23
PCDHGB3-201ENST00000576222 OR6Y1Q8NGX8 325 aa13.61□□□□□ -0.23
PCDHGB3-201ENST00000576222 CYP2W1Q8TAV3 490 aa13.61□□□□□ -0.23
PCDHGB3-201ENST00000576222 RTFDC1Q9BY42 306 aaPredicted RBP13.61□□□□□ -0.23
PCDHGB3-201ENST00000576222 GRIP2Q9C0E4 1043 aa13.61□□□□□ -0.23
PCDHGB3-201ENST00000576222 FNDC3AQ9Y2H6 1198 aaKnown RBP13.61□□□□□ -0.23
PCDHGB3-201ENST00000576222 RIC1Q4ADV7 1423 aa13.61□□□□□ -0.23
PCDHGB3-201ENST00000576222 ASTN1O14525 1302 aa13.61□□□□□ -0.23
PCDHGB3-201ENST00000576222 ATP5BP06576 529 aaKnown RBP13.61□□□□□ -0.23
PCDHGB3-201ENST00000576222 MRPS15P82914 257 aaKnown RBP13.61□□□□□ -0.23
PCDHGB3-201ENST00000576222 ZBTB41Q5SVQ8 909 aa13.61□□□□□ -0.23
PCDHGB3-201ENST00000576222 CIAPIN1Q6FI81 312 aa13.61□□□□□ -0.23
PCDHGB3-201ENST00000576222 SNRNP48Q6IEG0 339 aaKnown RBP13.61□□□□□ -0.23
PCDHGB3-201ENST00000576222 SLC30A10Q6XR72 485 aa13.61□□□□□ -0.23
PCDHGB3-201ENST00000576222 KYQ8NBH2 561 aa13.61□□□□□ -0.23
PCDHGB3-201ENST00000576222 C17orf75Q9HAS0 396 aa13.61□□□□□ -0.23
PCDHGB3-201ENST00000576222 AGAP1Q9UPQ3 857 aa13.61□□□□□ -0.23
PCDHGB3-201ENST00000576222 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.61□□□□□ -0.23
PCDHGB3-201ENST00000576222 PAIP1Q9H074 479 aaKnown RBP13.61□□□□□ -0.23
PCDHGB3-201ENST00000576222 DENND2DQ9H6A0 471 aaPredicted RBP13.61□□□□□ -0.23
PCDHGB3-201ENST00000576222 ARHGEF3Q9NR81 526 aa13.61□□□□□ -0.23
PCDHGB3-201ENST00000576222 SLC39A10Q9ULF5 831 aa13.61□□□□□ -0.23
PCDHGB3-201ENST00000576222 M0R3G1 203 aa13.6□□□□□ -0.23
PCDHGB3-201ENST00000576222 POLRMTO00411 1230 aaKnown RBP13.6□□□□□ -0.23
PCDHGB3-201ENST00000576222 NPTXRO95502 500 aa13.6□□□□□ -0.23
PCDHGB3-201ENST00000576222 OATP04181 439 aa13.6□□□□□ -0.23
PCDHGB3-201ENST00000576222 NPTX2P47972 431 aa13.6□□□□□ -0.23
PCDHGB3-201ENST00000576222 PPATQ06203 517 aa13.6□□□□□ -0.23
PCDHGB3-201ENST00000576222 CYP24A1Q07973 514 aa13.6□□□□□ -0.23
PCDHGB3-201ENST00000576222 C4orf50Q6ZRC1 276 aa13.6□□□□□ -0.23
PCDHGB3-201ENST00000576222 ZBTB49Q6ZSB9 765 aa13.6□□□□□ -0.23
PCDHGB3-201ENST00000576222 RNF149Q8NC42 400 aa13.6□□□□□ -0.23
PCDHGB3-201ENST00000576222 OR6P1Q8NGX9 317 aa13.6□□□□□ -0.23
PCDHGB3-201ENST00000576222 EBF2Q9HAK2 575 aa13.6□□□□□ -0.23
PCDHGB3-201ENST00000576222 FBXO6Q9NRD1 293 aaPredicted RBP13.6□□□□□ -0.23
PCDHGB3-201ENST00000576222 M0QZ92 97 aa13.6□□□□□ -0.23
PCDHGB3-201ENST00000576222 GSC2O15499 205 aa13.6□□□□□ -0.23
PCDHGB3-201ENST00000576222 SLITRK3O94933 977 aa13.6□□□□□ -0.23
PCDHGB3-201ENST00000576222 CYP1A2P05177 515 aa13.6□□□□□ -0.23
PCDHGB3-201ENST00000576222 CPA3P15088 417 aa13.6□□□□□ -0.23
PCDHGB3-201ENST00000576222 TFE3P19532 575 aaPredicted RBP13.6□□□□□ -0.23
PCDHGB3-201ENST00000576222 KCNA4P22459 653 aa13.6□□□□□ -0.23
PCDHGB3-201ENST00000576222 CNTFP26441 200 aa13.6□□□□□ -0.23
PCDHGB3-201ENST00000576222 PPP3CAQ08209 521 aa13.6□□□□□ -0.23
PCDHGB3-201ENST00000576222 NME3Q13232 169 aa13.6□□□□□ -0.23
PCDHGB3-201ENST00000576222 KCTD2Q14681 263 aa13.6□□□□□ -0.23
PCDHGB3-201ENST00000576222 CLNKQ7Z7G1 428 aa13.6□□□□□ -0.23
PCDHGB3-201ENST00000576222 KATNAL2Q8IYT4 538 aa13.6□□□□□ -0.23
PCDHGB3-201ENST00000576222 TMEM79Q9BSE2 394 aa13.6□□□□□ -0.23
PCDHGB3-201ENST00000576222 USP21Q9UK80 565 aa13.6□□□□□ -0.23
PCDHGB3-201ENST00000576222 FAM86B1E9PN63 330 aa13.6□□□□□ -0.23
PCDHGB3-201ENST00000576222 PRKCBP05771 671 aa13.6□□□□□ -0.23
PCDHGB3-201ENST00000576222 FAM86B2P0C5J1 330 aa13.6□□□□□ -0.23
PCDHGB3-201ENST00000576222 ADORA2BP29275 332 aa13.6□□□□□ -0.23
PCDHGB3-201ENST00000576222 SLC1A6P48664 564 aa13.6□□□□□ -0.23
PCDHGB3-201ENST00000576222 ITPK1Q13572 414 aa13.6□□□□□ -0.23
PCDHGB3-201ENST00000576222 ZCCHC23Q6ZST2 131 aa13.6□□□□□ -0.23
PCDHGB3-201ENST00000576222 ELMO3Q96BJ8 720 aa13.6□□□□□ -0.23
PCDHGB3-201ENST00000576222 VCPIP1Q96JH7 1222 aa13.6□□□□□ -0.23
PCDHGB3-201ENST00000576222 ATXN10Q9UBB4 475 aa13.6□□□□□ -0.23
PCDHGB3-201ENST00000576222 NR2E1Q9Y466 385 aa13.6□□□□□ -0.23
PCDHGB3-201ENST00000576222 RPS6KL1Q9Y6S9 549 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms