RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 SLC14A1Q13336 389 aa17.47■□□□□ 0.39
CTDNEP1-211ENST00000575783 DHCR24Q15392 516 aa17.47■□□□□ 0.39
CTDNEP1-211ENST00000575783 HSF5Q4G112 596 aaPredicted RBP17.47■□□□□ 0.39
CTDNEP1-211ENST00000575783 SLC36A4Q6YBV0 504 aa17.47■□□□□ 0.39
CTDNEP1-211ENST00000575783 PNMA5Q96PV4 448 aa17.47■□□□□ 0.39
CTDNEP1-211ENST00000575783 CCSER1Q9C0I3 900 aa17.47■□□□□ 0.39
CTDNEP1-211ENST00000575783 ASB7Q9H672 318 aa17.47■□□□□ 0.39
CTDNEP1-211ENST00000575783 ABCB6Q9NP58 842 aa17.47■□□□□ 0.39
CTDNEP1-211ENST00000575783 ARHGEF4Q9NR80 690 aa17.47■□□□□ 0.39
CTDNEP1-211ENST00000575783 DDX43Q9NXZ2 648 aaKnown RBP17.47■□□□□ 0.39
CTDNEP1-211ENST00000575783 C2CD2Q9Y426 696 aa17.47■□□□□ 0.39
CTDNEP1-211ENST00000575783 KALRNO60229 2985 aa17.46■□□□□ 0.39
CTDNEP1-211ENST00000575783 K7ENM7 598 aa17.46■□□□□ 0.39
CTDNEP1-211ENST00000575783 PIGRP01833 764 aa17.46■□□□□ 0.39
CTDNEP1-211ENST00000575783 PLA2G4BP0C869 781 aa17.46■□□□□ 0.39
CTDNEP1-211ENST00000575783 TCF3P15923 654 aa17.46■□□□□ 0.39
CTDNEP1-211ENST00000575783 GRIA2P42262 883 aa17.46■□□□□ 0.39
CTDNEP1-211ENST00000575783 SLC12A3P55017 1021 aa17.46■□□□□ 0.39
CTDNEP1-211ENST00000575783 RESTQ13127 1097 aa17.46■□□□□ 0.39
CTDNEP1-211ENST00000575783 CCDC142Q17RM4 750 aa17.46■□□□□ 0.39
CTDNEP1-211ENST00000575783 PLEKHG6Q3KR16 790 aa17.46■□□□□ 0.39
CTDNEP1-211ENST00000575783 SLC39A4Q6P5W5 647 aa17.46■□□□□ 0.39
CTDNEP1-211ENST00000575783 DTHD1Q6ZMT9 781 aa17.46■□□□□ 0.39
CTDNEP1-211ENST00000575783 C12orf40Q86WS4 652 aa17.46■□□□□ 0.39
CTDNEP1-211ENST00000575783 SPATA2LQ8IUW3 424 aaPredicted RBP17.46■□□□□ 0.39
CTDNEP1-211ENST00000575783 NAXDQ8IW45 347 aa17.46■□□□□ 0.39
CTDNEP1-211ENST00000575783 PDCL2Q8N4E4 241 aa17.46■□□□□ 0.39
CTDNEP1-211ENST00000575783 MYCT1Q8N699 235 aa17.46■□□□□ 0.39
CTDNEP1-211ENST00000575783 LEO1Q8WVC0 666 aaPredicted RBP17.46■□□□□ 0.39
CTDNEP1-211ENST00000575783 ACBD6Q9BR61 282 aa17.46■□□□□ 0.39
CTDNEP1-211ENST00000575783 APOBEC2Q9Y235 224 aaKnown RBP17.46■□□□□ 0.39
CTDNEP1-211ENST00000575783 PCDHB6Q9Y5E3 794 aa17.46■□□□□ 0.39
CTDNEP1-211ENST00000575783 CHRM1P11229 460 aaPredicted RBP17.45■□□□□ 0.38
CTDNEP1-211ENST00000575783 TNFRSF4P43489 277 aa17.45■□□□□ 0.38
CTDNEP1-211ENST00000575783 PDE6CP51160 858 aa17.45■□□□□ 0.38
CTDNEP1-211ENST00000575783 ARSHQ5FYA8 562 aa17.45■□□□□ 0.38
CTDNEP1-211ENST00000575783 INTS6LQ5JSJ4 861 aaKnown RBP17.45■□□□□ 0.38
CTDNEP1-211ENST00000575783 ADALQ6DHV7 355 aa17.45■□□□□ 0.38
CTDNEP1-211ENST00000575783 RHBDF2Q6PJF5 856 aa17.45■□□□□ 0.38
CTDNEP1-211ENST00000575783 SLCO6A1Q86UG4 719 aa17.45■□□□□ 0.38
CTDNEP1-211ENST00000575783 RGL4Q8IZJ4 473 aa17.45■□□□□ 0.38
CTDNEP1-211ENST00000575783 TRIML1Q8N9V2 468 aa17.45■□□□□ 0.38
CTDNEP1-211ENST00000575783 ERLEC1Q96DZ1 483 aa17.45■□□□□ 0.38
CTDNEP1-211ENST00000575783 HSPA12BQ96MM6 686 aa17.45■□□□□ 0.38
CTDNEP1-211ENST00000575783 SCUBE2Q9NQ36 999 aa17.45■□□□□ 0.38
CTDNEP1-211ENST00000575783 SMPD4Q9NXE4 827 aa17.45■□□□□ 0.38
CTDNEP1-211ENST00000575783 CALCOCO1Q9P1Z2 691 aa17.45■□□□□ 0.38
CTDNEP1-211ENST00000575783 L1RE1Q9UN81 338 aa17.45■□□□□ 0.38
CTDNEP1-211ENST00000575783 TBC1D3BA6NDS4 549 aa17.44■□□□□ 0.38
CTDNEP1-211ENST00000575783 ANKRD63C9JTQ0 380 aa17.44■□□□□ 0.38
CTDNEP1-211ENST00000575783 HUS1O60921 280 aa17.44■□□□□ 0.38
CTDNEP1-211ENST00000575783 PRB1P04280 392 aa17.44■□□□□ 0.38
CTDNEP1-211ENST00000575783 GABRG2P18507 467 aa17.44■□□□□ 0.38
CTDNEP1-211ENST00000575783 MYL7Q01449 175 aa17.44■□□□□ 0.38
CTDNEP1-211ENST00000575783 C19orf57Q0VDD7 668 aa17.44■□□□□ 0.38
CTDNEP1-211ENST00000575783 TOGARAM2Q6ZUX3 1019 aa17.44■□□□□ 0.38
CTDNEP1-211ENST00000575783 SLC41A1Q8IVJ1 513 aa17.44■□□□□ 0.38
CTDNEP1-211ENST00000575783 CRELD1Q96HD1 420 aa17.44■□□□□ 0.38
CTDNEP1-211ENST00000575783 ZNF560Q96MR9 790 aa17.44■□□□□ 0.38
CTDNEP1-211ENST00000575783 TRPM5Q9NZQ8 1165 aa17.44■□□□□ 0.38
CTDNEP1-211ENST00000575783 KCND2Q9NZV8 630 aa17.44■□□□□ 0.38
CTDNEP1-211ENST00000575783 ZNF638Q14966 1978 aaKnown RBP17.44■□□□□ 0.38
CTDNEP1-211ENST00000575783 A0A0A0MRY4 1105 aa17.43■□□□□ 0.38
CTDNEP1-211ENST00000575783 A0A1W2PQD8 194 aa17.43■□□□□ 0.38
CTDNEP1-211ENST00000575783 TISP43B9A030 160 aa17.43■□□□□ 0.38
CTDNEP1-211ENST00000575783 SLC9A3R1O14745 358 aaPredicted RBP17.43■□□□□ 0.38
CTDNEP1-211ENST00000575783 HCRTO43612 131 aa17.43■□□□□ 0.38
CTDNEP1-211ENST00000575783 GJB3O75712 270 aa17.43■□□□□ 0.38
CTDNEP1-211ENST00000575783 ADH1CP00326 375 aa17.43■□□□□ 0.38
CTDNEP1-211ENST00000575783 ABL1P00519 1130 aa17.43■□□□□ 0.38
CTDNEP1-211ENST00000575783 EIF2DP41214 584 aaKnown RBP17.43■□□□□ 0.38
CTDNEP1-211ENST00000575783 PNPLA4P41247 253 aa17.43■□□□□ 0.38
CTDNEP1-211ENST00000575783 WASP42768 502 aa17.43■□□□□ 0.38
CTDNEP1-211ENST00000575783 TOB1P50616 345 aaPredicted RBP17.43■□□□□ 0.38
CTDNEP1-211ENST00000575783 NAT16Q8N8M0 369 aa17.43■□□□□ 0.38
CTDNEP1-211ENST00000575783 SETD7Q8WTS6 366 aaKnown RBP17.43■□□□□ 0.38
CTDNEP1-211ENST00000575783 CDK5RAP3Q96JB5 506 aa17.43■□□□□ 0.38
CTDNEP1-211ENST00000575783 PKMYT1Q99640 499 aa17.43■□□□□ 0.38
CTDNEP1-211ENST00000575783 REEP2Q9BRK0 252 aa17.43■□□□□ 0.38
CTDNEP1-211ENST00000575783 RNF38Q9H0F5 515 aa17.43■□□□□ 0.38
CTDNEP1-211ENST00000575783 ZHX3Q9H4I2 956 aa17.43■□□□□ 0.38
CTDNEP1-211ENST00000575783 CFAP97Q9P2B7 532 aa17.43■□□□□ 0.38
CTDNEP1-211ENST00000575783 CYP8B1Q9UNU6 501 aa17.43■□□□□ 0.38
CTDNEP1-211ENST00000575783 AGAP1Q9UPQ3 857 aa17.43■□□□□ 0.38
CTDNEP1-211ENST00000575783 CPQQ9Y646 472 aa17.43■□□□□ 0.38
CTDNEP1-211ENST00000575783 MYO16Q9Y6X6 1858 aa17.43■□□□□ 0.38
CTDNEP1-211ENST00000575783 APC2O95996 2303 aa17.43■□□□□ 0.38
CTDNEP1-211ENST00000575783 TSC2P49815 1807 aa17.42■□□□□ 0.38
CTDNEP1-211ENST00000575783 IGHV1OR15-9A0A0B4J2B8 117 aa17.42■□□□□ 0.38
CTDNEP1-211ENST00000575783 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.42■□□□□ 0.38
CTDNEP1-211ENST00000575783 ZBTB24O43167 697 aaPredicted RBP17.42■□□□□ 0.38
CTDNEP1-211ENST00000575783 FAM13AO94988 1023 aa17.42■□□□□ 0.38
CTDNEP1-211ENST00000575783 ADH5P11766 374 aa17.42■□□□□ 0.38
CTDNEP1-211ENST00000575783 POLR2BP30876 1174 aaKnown RBP17.42■□□□□ 0.38
CTDNEP1-211ENST00000575783 CYP4F3Q08477 520 aa17.42■□□□□ 0.38
CTDNEP1-211ENST00000575783 ST3GAL1Q11201 340 aa17.42■□□□□ 0.38
CTDNEP1-211ENST00000575783 DHX8Q14562 1220 aaKnown RBP17.42■□□□□ 0.38
CTDNEP1-211ENST00000575783 CFAP221Q4G0U5 840 aa17.42■□□□□ 0.38
CTDNEP1-211ENST00000575783 MARCH9Q86YJ5 346 aa17.42■□□□□ 0.38
CTDNEP1-211ENST00000575783 ZNF513Q8N8E2 541 aaPredicted RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms