RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 ANO6Q4KMQ2 910 aa14.08□□□□□ -0.16
RPAIN-216ENST00000575599 ZNF394Q53GI3 561 aa14.08□□□□□ -0.16
RPAIN-216ENST00000575599 VITQ6UXI7 678 aa14.08□□□□□ -0.16
RPAIN-216ENST00000575599 BMP8AQ7Z5Y6 402 aa14.08□□□□□ -0.16
RPAIN-216ENST00000575599 ARID3BQ8IVW6 561 aaPredicted RBP14.08□□□□□ -0.16
RPAIN-216ENST00000575599 FUKQ8N0W3 1084 aa14.08□□□□□ -0.16
RPAIN-216ENST00000575599 FBXL6Q8N531 539 aa14.08□□□□□ -0.16
RPAIN-216ENST00000575599 MAB21L3Q8N8X9 362 aa14.08□□□□□ -0.16
RPAIN-216ENST00000575599 C12orf29Q8N999 325 aa14.08□□□□□ -0.16
RPAIN-216ENST00000575599 FLCNQ8NFG4 579 aa14.08□□□□□ -0.16
RPAIN-216ENST00000575599 SLC2A14Q8TDB8 520 aa14.08□□□□□ -0.16
RPAIN-216ENST00000575599 MRPS31Q92665 395 aaKnown RBP14.08□□□□□ -0.16
RPAIN-216ENST00000575599 TRMT2BQ96GJ1 504 aaKnown RBP14.08□□□□□ -0.16
RPAIN-216ENST00000575599 SMARCD1Q96GM5 515 aa14.08□□□□□ -0.16
RPAIN-216ENST00000575599 SPATA17Q96L03 361 aa14.08□□□□□ -0.16
RPAIN-216ENST00000575599 CNOT6LQ96LI5 555 aaKnown RBP14.08□□□□□ -0.16
RPAIN-216ENST00000575599 C8orf48Q96LL4 319 aa14.08□□□□□ -0.16
RPAIN-216ENST00000575599 SMG9Q9H0W8 520 aaKnown RBP14.08□□□□□ -0.16
RPAIN-216ENST00000575599 TASP1Q9H6P5 420 aa14.08□□□□□ -0.16
RPAIN-216ENST00000575599 TRPC7Q9HCX4 862 aa14.08□□□□□ -0.16
RPAIN-216ENST00000575599 SLC2A4RGQ9NR83 387 aa14.08□□□□□ -0.16
RPAIN-216ENST00000575599 WNT16Q9UBV4 365 aa14.08□□□□□ -0.16
RPAIN-216ENST00000575599 RAPGEFL1Q9UHV5 662 aa14.08□□□□□ -0.16
RPAIN-216ENST00000575599 COQ4Q9Y3A0 265 aa14.08□□□□□ -0.16
RPAIN-216ENST00000575599 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.08□□□□□ -0.16
RPAIN-216ENST00000575599 NUP210Q8TEM1 1887 aaPredicted RBP14.07□□□□□ -0.16
RPAIN-216ENST00000575599 NCANO14594 1321 aa14.07□□□□□ -0.16
RPAIN-216ENST00000575599 HEPACAM2A8MVW5 462 aa14.07□□□□□ -0.16
RPAIN-216ENST00000575599 DPYSL4O14531 572 aa14.07□□□□□ -0.16
RPAIN-216ENST00000575599 AP1G2O75843 785 aa14.07□□□□□ -0.16
RPAIN-216ENST00000575599 PRAMEF12O95522 483 aa14.07□□□□□ -0.16
RPAIN-216ENST00000575599 MARSP56192 900 aaKnown RBP14.07□□□□□ -0.16
RPAIN-216ENST00000575599 CETN1Q12798 172 aa14.07□□□□□ -0.16
RPAIN-216ENST00000575599 TXNDC8Q6A555 127 aa14.07□□□□□ -0.16
RPAIN-216ENST00000575599 PAQR9Q6ZVX9 377 aa14.07□□□□□ -0.16
RPAIN-216ENST00000575599 TRIM59Q8IWR1 403 aa14.07□□□□□ -0.16
RPAIN-216ENST00000575599 CRYBG2Q8N1P7 616 aa14.07□□□□□ -0.16
RPAIN-216ENST00000575599 WHAMMQ8TF30 809 aa14.07□□□□□ -0.16
RPAIN-216ENST00000575599 RSPRY1Q96DX4 576 aa14.07□□□□□ -0.16
RPAIN-216ENST00000575599 MYRFLQ96LU7 910 aa14.07□□□□□ -0.16
RPAIN-216ENST00000575599 MED15Q96RN5 788 aa14.07□□□□□ -0.16
RPAIN-216ENST00000575599 KCNK16Q96T55 309 aa14.07□□□□□ -0.16
RPAIN-216ENST00000575599 TRMT61BQ9BVS5 477 aaKnown RBP14.07□□□□□ -0.16
RPAIN-216ENST00000575599 SLC46A2Q9BY10 475 aa14.07□□□□□ -0.16
RPAIN-216ENST00000575599 DNAI2Q9GZS0 605 aa14.07□□□□□ -0.16
RPAIN-216ENST00000575599 TRPV4Q9HBA0 871 aa14.07□□□□□ -0.16
RPAIN-216ENST00000575599 DMAP1Q9NPF5 467 aaPredicted RBP14.07□□□□□ -0.16
RPAIN-216ENST00000575599 ARHGEF3Q9NR81 526 aa14.07□□□□□ -0.16
RPAIN-216ENST00000575599 CISHQ9NSE2 258 aa14.07□□□□□ -0.16
RPAIN-216ENST00000575599 HCN4Q9Y3Q4 1203 aa14.07□□□□□ -0.16
RPAIN-216ENST00000575599 GREB1Q4ZG55 1949 aa14.06□□□□□ -0.16
RPAIN-216ENST00000575599 DENND4CQ5VZ89 1909 aa14.06□□□□□ -0.16
RPAIN-216ENST00000575599 KRBA1A5PL33 1030 aa14.06□□□□□ -0.16
RPAIN-216ENST00000575599 STK25O00506 426 aa14.06□□□□□ -0.16
RPAIN-216ENST00000575599 AFPP02771 609 aaKnown RBP14.06□□□□□ -0.16
RPAIN-216ENST00000575599 PSMC3P17980 439 aa14.06□□□□□ -0.16
RPAIN-216ENST00000575599 DDX6P26196 483 aaKnown RBP eCLIP14.06□□□□□ -0.16
RPAIN-216ENST00000575599 GDI1P31150 447 aa14.06□□□□□ -0.16
RPAIN-216ENST00000575599 AVPR1AP37288 418 aa14.06□□□□□ -0.16
RPAIN-216ENST00000575599 VCPP55072 806 aaKnown RBP14.06□□□□□ -0.16
RPAIN-216ENST00000575599 PFKPQ01813 784 aa14.06□□□□□ -0.16
RPAIN-216ENST00000575599 KCNH2Q12809 1159 aa14.06□□□□□ -0.16
RPAIN-216ENST00000575599 CUL2Q13617 745 aa14.06□□□□□ -0.16
RPAIN-216ENST00000575599 YAF2Q8IY57 180 aa14.06□□□□□ -0.16
RPAIN-216ENST00000575599 DEPDC1BQ8WUY9 529 aa14.06□□□□□ -0.16
RPAIN-216ENST00000575599 JAKMIP2Q96AA8 810 aa14.06□□□□□ -0.16
RPAIN-216ENST00000575599 FAXDC2Q96IV6 333 aa14.06□□□□□ -0.16
RPAIN-216ENST00000575599 CEP295NLQ96MC4 621 aa14.06□□□□□ -0.16
RPAIN-216ENST00000575599 NT5C1BQ96P26 610 aa14.06□□□□□ -0.16
RPAIN-216ENST00000575599 FUCA2Q9BTY2 467 aa14.06□□□□□ -0.16
RPAIN-216ENST00000575599 BRD9Q9H8M2 597 aa14.06□□□□□ -0.16
RPAIN-216ENST00000575599 EHD2Q9NZN4 543 aa14.06□□□□□ -0.16
RPAIN-216ENST00000575599 MYH10P35580 1976 aa14.05□□□□□ -0.16
RPAIN-216ENST00000575599 BECN2A8MW95 431 aa14.05□□□□□ -0.16
RPAIN-216ENST00000575599 FAM200BP0CF97 657 aa14.05□□□□□ -0.16
RPAIN-216ENST00000575599 ZNF165P49910 485 aa14.05□□□□□ -0.16
RPAIN-216ENST00000575599 MAP3K7CLP57077 242 aa14.05□□□□□ -0.16
RPAIN-216ENST00000575599 TPM4P67936 248 aa14.05□□□□□ -0.16
RPAIN-216ENST00000575599 GSE1Q14687 1217 aa14.05□□□□□ -0.16
RPAIN-216ENST00000575599 CT47A1Q5JQC4 288 aaPredicted RBP14.05□□□□□ -0.16
RPAIN-216ENST00000575599 CWF19L1Q69YN2 538 aaKnown RBP14.05□□□□□ -0.16
RPAIN-216ENST00000575599 MFSD6LQ8IWD5 586 aa14.05□□□□□ -0.16
RPAIN-216ENST00000575599 CMTM8Q8IZV2 173 aa14.05□□□□□ -0.16
RPAIN-216ENST00000575599 NUP93Q8N1F7 819 aa14.05□□□□□ -0.16
RPAIN-216ENST00000575599 TTC39CQ8N584 583 aa14.05□□□□□ -0.16
RPAIN-216ENST00000575599 TTC16Q8NEE8 873 aa14.05□□□□□ -0.16
RPAIN-216ENST00000575599 E2F7Q96AV8 911 aa14.05□□□□□ -0.16
RPAIN-216ENST00000575599 CYFIP2Q96F07 1278 aa14.05□□□□□ -0.16
RPAIN-216ENST00000575599 HEXIM2Q96MH2 286 aaKnown RBP14.05□□□□□ -0.16
RPAIN-216ENST00000575599 SMOQ99835 787 aa14.05□□□□□ -0.16
RPAIN-216ENST00000575599 ZMYM5Q9UJ78 669 aa14.05□□□□□ -0.16
RPAIN-216ENST00000575599 COL4A3Q01955 1670 aa14.05□□□□□ -0.16
RPAIN-216ENST00000575599 KMT2EQ8IZD2 1858 aa14.04□□□□□ -0.16
RPAIN-216ENST00000575599 TRAV19A0A0A6YYK7 116 aa14.04□□□□□ -0.16
RPAIN-216ENST00000575599 C2orf78A6NCI8 922 aa14.04□□□□□ -0.16
RPAIN-216ENST00000575599 GOLGA6L3A6NEY3 463 aa14.04□□□□□ -0.16
RPAIN-216ENST00000575599 SMTNL1A8MU46 457 aa14.04□□□□□ -0.16
RPAIN-216ENST00000575599 GOLGA6L19H0YKK7 550 aa14.04□□□□□ -0.16
RPAIN-216ENST00000575599 ZNF263O14978 683 aa14.04□□□□□ -0.16
RPAIN-216ENST00000575599 PMM2O15305 246 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms