RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 CCDC33Q8N5R6 958 aa9.65□□□□□ -0.86
SMG6-218ENST00000575454 TOP6BLQ8N6T0 577 aa9.65□□□□□ -0.86
SMG6-218ENST00000575454 LRRC52Q8N7C0 313 aa9.65□□□□□ -0.86
SMG6-218ENST00000575454 SPATA17Q96L03 361 aa9.65□□□□□ -0.86
SMG6-218ENST00000575454 FNBP1Q96RU3 617 aa9.65□□□□□ -0.86
SMG6-218ENST00000575454 SLC22A12Q96S37 553 aa9.65□□□□□ -0.86
SMG6-218ENST00000575454 ST6GALNAC4Q9H4F1 302 aa9.65□□□□□ -0.86
SMG6-218ENST00000575454 ZHX3Q9H4I2 956 aa9.65□□□□□ -0.86
SMG6-218ENST00000575454 PILRBQ9UKJ0 227 aa9.65□□□□□ -0.86
SMG6-218ENST00000575454 KLK13Q9UKR3 277 aa9.65□□□□□ -0.86
SMG6-218ENST00000575454 SDK1Q7Z5N4 2213 aa9.65□□□□□ -0.86
SMG6-218ENST00000575454 ARID2Q68CP9 1835 aa9.64□□□□□ -0.87
SMG6-218ENST00000575454 C2orf78A6NCI8 922 aa9.64□□□□□ -0.87
SMG6-218ENST00000575454 ANKRD63C9JTQ0 380 aa9.64□□□□□ -0.87
SMG6-218ENST00000575454 LEFTY2O00292 366 aa9.64□□□□□ -0.87
SMG6-218ENST00000575454 KAT7O95251 611 aa9.64□□□□□ -0.87
SMG6-218ENST00000575454 KLF8O95600 359 aaPredicted RBP9.64□□□□□ -0.87
SMG6-218ENST00000575454 SYPP08247 313 aa9.64□□□□□ -0.87
SMG6-218ENST00000575454 SLC7A9P82251 487 aa9.64□□□□□ -0.87
SMG6-218ENST00000575454 RBP5P82980 135 aa9.64□□□□□ -0.87
SMG6-218ENST00000575454 TFAMQ00059 246 aaKnown RBP9.64□□□□□ -0.87
SMG6-218ENST00000575454 DHCR24Q15392 516 aa9.64□□□□□ -0.87
SMG6-218ENST00000575454 MAP7D1Q3KQU3 841 aa9.64□□□□□ -0.87
SMG6-218ENST00000575454 TMEM92Q6UXU6 159 aa9.64□□□□□ -0.87
SMG6-218ENST00000575454 ARMCX6Q7L4S7 300 aa9.64□□□□□ -0.87
SMG6-218ENST00000575454 DPH6Q7L8W6 267 aa9.64□□□□□ -0.87
SMG6-218ENST00000575454 DDX42Q86XP3 938 aaKnown RBP eCLIP9.64□□□□□ -0.87
SMG6-218ENST00000575454 SCN4BQ8IWT1 228 aa9.64□□□□□ -0.87
SMG6-218ENST00000575454 PGBD3Q8N328 593 aa9.64□□□□□ -0.87
SMG6-218ENST00000575454 ALLCQ8N6M5 410 aa9.64□□□□□ -0.87
SMG6-218ENST00000575454 IL17RCQ8NAC3 791 aa9.64□□□□□ -0.87
SMG6-218ENST00000575454 TXNDC5Q8NBS9 432 aaKnown RBP9.64□□□□□ -0.87
SMG6-218ENST00000575454 LRRC15Q8TF66 581 aa9.64□□□□□ -0.87
SMG6-218ENST00000575454 POMGNT1Q8WZA1 660 aa9.64□□□□□ -0.87
SMG6-218ENST00000575454 HVCN1Q96D96 273 aa9.64□□□□□ -0.87
SMG6-218ENST00000575454 PKMYT1Q99640 499 aa9.64□□□□□ -0.87
SMG6-218ENST00000575454 GTPBP2Q9BX10 602 aaKnown RBP9.64□□□□□ -0.87
SMG6-218ENST00000575454 TMEM74BQ9NUR3 256 aa9.64□□□□□ -0.87
SMG6-218ENST00000575454 GDAP2Q9NXN4 497 aa9.64□□□□□ -0.87
SMG6-218ENST00000575454 MAGEC2Q9UBF1 373 aaPredicted RBP9.64□□□□□ -0.87
SMG6-218ENST00000575454 GTF3C4Q9UKN8 822 aa9.64□□□□□ -0.87
SMG6-218ENST00000575454 ITGA11Q9UKX5 1188 aa9.64□□□□□ -0.87
SMG6-218ENST00000575454 L1RE1Q9UN81 338 aa9.64□□□□□ -0.87
SMG6-218ENST00000575454 AGAP1Q9UPQ3 857 aa9.64□□□□□ -0.87
SMG6-218ENST00000575454 EXOC7Q9UPT5 735 aa9.64□□□□□ -0.87
SMG6-218ENST00000575454 CFAP46Q8IYW2 2715 aa9.63□□□□□ -0.87
SMG6-218ENST00000575454 TCRBV21S2A2A0A5A6 115 aa9.63□□□□□ -0.87
SMG6-218ENST00000575454 SGK1O00141 431 aa9.63□□□□□ -0.87
SMG6-218ENST00000575454 ARHGAP33O14559 1287 aa9.63□□□□□ -0.87
SMG6-218ENST00000575454 GABRDO14764 452 aa9.63□□□□□ -0.87
SMG6-218ENST00000575454 ZNF217O75362 1048 aa9.63□□□□□ -0.87
SMG6-218ENST00000575454 SEC24BO95487 1268 aa9.63□□□□□ -0.87
SMG6-218ENST00000575454 LDHAP00338 332 aaKnown RBP9.63□□□□□ -0.87
SMG6-218ENST00000575454 CYP17A1P05093 508 aa9.63□□□□□ -0.87
SMG6-218ENST00000575454 ITPKAP23677 461 aa9.63□□□□□ -0.87
SMG6-218ENST00000575454 ACAT1P24752 427 aaKnown RBP9.63□□□□□ -0.87
SMG6-218ENST00000575454 ANXA13P27216 316 aa9.63□□□□□ -0.87
SMG6-218ENST00000575454 POLR2BP30876 1174 aaKnown RBP9.63□□□□□ -0.87
SMG6-218ENST00000575454 TIE1P35590 1138 aa9.63□□□□□ -0.87
SMG6-218ENST00000575454 RPL6Q02878 288 aaKnown RBP9.63□□□□□ -0.87
SMG6-218ENST00000575454 MYO1EQ12965 1108 aa9.63□□□□□ -0.87
SMG6-218ENST00000575454 RESTQ13127 1097 aa9.63□□□□□ -0.87
SMG6-218ENST00000575454 ZC2HC1CQ53FD0 456 aaPredicted RBP9.63□□□□□ -0.87
SMG6-218ENST00000575454 MCTP1Q6DN14 999 aa9.63□□□□□ -0.87
SMG6-218ENST00000575454 FAM171BQ6P995 826 aa9.63□□□□□ -0.87
SMG6-218ENST00000575454 DENND5BQ6ZUT9 1274 aa9.63□□□□□ -0.87
SMG6-218ENST00000575454 RAB44Q7Z6P3 723 aaPredicted RBP9.63□□□□□ -0.87
SMG6-218ENST00000575454 FILIP1Q7Z7B0 1213 aa9.63□□□□□ -0.87
SMG6-218ENST00000575454 ADGRF2Q8IZF7 708 aa9.63□□□□□ -0.87
SMG6-218ENST00000575454 CHCHD4Q8N4Q1 142 aa9.63□□□□□ -0.87
SMG6-218ENST00000575454 CSGALNACT2Q8N6G5 542 aa9.63□□□□□ -0.87
SMG6-218ENST00000575454 KRI1Q8N9T8 703 aaKnown RBP9.63□□□□□ -0.87
SMG6-218ENST00000575454 RASSF8Q8NHQ8 419 aa9.63□□□□□ -0.87
SMG6-218ENST00000575454 HMGB4Q8WW32 186 aa9.63□□□□□ -0.87
SMG6-218ENST00000575454 RLN3Q8WXF3 142 aa9.63□□□□□ -0.87
SMG6-218ENST00000575454 OTUB2Q96DC9 234 aa9.63□□□□□ -0.87
SMG6-218ENST00000575454 FAM124BQ9H5Z6 455 aaPredicted RBP9.63□□□□□ -0.87
SMG6-218ENST00000575454 ARHGEF4Q9NR80 690 aa9.63□□□□□ -0.87
SMG6-218ENST00000575454 TBC1D14Q9P2M4 693 aa9.63□□□□□ -0.87
SMG6-218ENST00000575454 MBD1Q9UIS9 605 aaPredicted RBP9.63□□□□□ -0.87
SMG6-218ENST00000575454 CDH9Q9ULB4 789 aa9.63□□□□□ -0.87
SMG6-218ENST00000575454 GPSM3Q9Y4H4 160 aa9.63□□□□□ -0.87
SMG6-218ENST00000575454 PCDHB9Q9Y5E1 797 aa9.63□□□□□ -0.87
SMG6-218ENST00000575454 SNX9Q9Y5X1 595 aa9.63□□□□□ -0.87
SMG6-218ENST00000575454 A0A1W2PQD8 194 aa9.62□□□□□ -0.87
SMG6-218ENST00000575454 TBC1D3BA6NDS4 549 aa9.62□□□□□ -0.87
SMG6-218ENST00000575454 ZNF840PA6NDX5 716 aa9.62□□□□□ -0.87
SMG6-218ENST00000575454 TULP1O00294 542 aaPredicted RBP9.62□□□□□ -0.87
SMG6-218ENST00000575454 TRIM66O15016 1216 aa9.62□□□□□ -0.87
SMG6-218ENST00000575454 BMP15O95972 392 aa9.62□□□□□ -0.87
SMG6-218ENST00000575454 ITGB3P05106 788 aa9.62□□□□□ -0.87
SMG6-218ENST00000575454 ADH5P11766 374 aa9.62□□□□□ -0.87
SMG6-218ENST00000575454 GRIK1P39086 918 aa9.62□□□□□ -0.87
SMG6-218ENST00000575454 KIR2DL1P43626 348 aaPredicted RBP9.62□□□□□ -0.87
SMG6-218ENST00000575454 DHX8Q14562 1220 aaKnown RBP9.62□□□□□ -0.87
SMG6-218ENST00000575454 TRIP6Q15654 476 aaKnown RBP9.62□□□□□ -0.87
SMG6-218ENST00000575454 BTBD8Q5XKL5 378 aa9.62□□□□□ -0.87
SMG6-218ENST00000575454 RHBDF2Q6PJF5 856 aa9.62□□□□□ -0.87
SMG6-218ENST00000575454 CRELD2Q6UXH1 353 aaPredicted RBP9.62□□□□□ -0.87
SMG6-218ENST00000575454 ZNF720Q7Z2F6 126 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms