RNA–Protein interactions for RNA: ENST00000575431.1

CCDC40-214, Transcript of coiled-coil domain containing 40, humanhuman

TSL 3

Gene CCDC40, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-214ENST00000575431 ARHGAP44Q17R89 818 aa10.12□□□□□ -0.79
CCDC40-214ENST00000575431 CCDC142Q17RM4 750 aa10.12□□□□□ -0.79
CCDC40-214ENST00000575431 LCLAT1Q6UWP7 414 aa10.12□□□□□ -0.79
CCDC40-214ENST00000575431 MTSS1LQ765P7 747 aa10.12□□□□□ -0.79
CCDC40-214ENST00000575431 APTXQ7Z2E3 356 aaKnown RBP10.12□□□□□ -0.79
CCDC40-214ENST00000575431 TMC8Q8IU68 726 aa10.12□□□□□ -0.79
CCDC40-214ENST00000575431 NPAS3Q8IXF0 933 aa10.12□□□□□ -0.79
CCDC40-214ENST00000575431 HS6ST3Q8IZP7 471 aa10.12□□□□□ -0.79
CCDC40-214ENST00000575431 NEK11Q8NG66 645 aa10.12□□□□□ -0.79
CCDC40-214ENST00000575431 ITFG1Q8TB96 612 aa10.12□□□□□ -0.79
CCDC40-214ENST00000575431 OVCA2Q8WZ82 227 aa10.12□□□□□ -0.79
CCDC40-214ENST00000575431 MRPS31Q92665 395 aaKnown RBP10.12□□□□□ -0.79
CCDC40-214ENST00000575431 KAT5Q92993 513 aa10.12□□□□□ -0.79
CCDC40-214ENST00000575431 SLITRK1Q96PX8 696 aa10.12□□□□□ -0.79
CCDC40-214ENST00000575431 KCNK16Q96T55 309 aa10.12□□□□□ -0.79
CCDC40-214ENST00000575431 TTLL2Q9BWV7 592 aa10.12□□□□□ -0.79
CCDC40-214ENST00000575431 LSM14BQ9BX40 385 aaKnown RBP10.12□□□□□ -0.79
CCDC40-214ENST00000575431 STK33Q9BYT3 514 aa10.12□□□□□ -0.79
CCDC40-214ENST00000575431 IL21Q9HBE4 155 aa10.12□□□□□ -0.79
CCDC40-214ENST00000575431 IL37Q9NZH6 218 aa10.12□□□□□ -0.79
CCDC40-214ENST00000575431 TSPAN16Q9UKR8 245 aa10.12□□□□□ -0.79
CCDC40-214ENST00000575431 MAGED2Q9UNF1 606 aaPredicted RBP10.12□□□□□ -0.79
CCDC40-214ENST00000575431 A0A1B0GTH6 734 aa10.11□□□□□ -0.79
CCDC40-214ENST00000575431 A0A1W2PRU2 124 aa10.11□□□□□ -0.79
CCDC40-214ENST00000575431 C2CD4DB7Z1M9 353 aa10.11□□□□□ -0.79
CCDC40-214ENST00000575431 RNF225M0QZC1 329 aaPredicted RBP10.11□□□□□ -0.79
CCDC40-214ENST00000575431 O00370 1275 aa10.11□□□□□ -0.79
CCDC40-214ENST00000575431 FOXN3O00409 490 aaPredicted RBP10.11□□□□□ -0.79
CCDC40-214ENST00000575431 CCDC172P0C7W6 258 aa10.11□□□□□ -0.79
CCDC40-214ENST00000575431 YWHAQP27348 245 aa10.11□□□□□ -0.79
CCDC40-214ENST00000575431 WEE1P30291 646 aa10.11□□□□□ -0.79
CCDC40-214ENST00000575431 USP8P40818 1118 aa10.11□□□□□ -0.79
CCDC40-214ENST00000575431 MAP3K7CLP57077 242 aa10.11□□□□□ -0.79
CCDC40-214ENST00000575431 FANCCQ00597 558 aa10.11□□□□□ -0.79
CCDC40-214ENST00000575431 BST2Q10589 180 aaKnown RBP10.11□□□□□ -0.79
CCDC40-214ENST00000575431 RAPGEF1Q13905 1077 aa10.11□□□□□ -0.79
CCDC40-214ENST00000575431 DRAP1Q14919 205 aaPredicted RBP10.11□□□□□ -0.79
CCDC40-214ENST00000575431 SLC5A9Q2M3M2 681 aa10.11□□□□□ -0.79
CCDC40-214ENST00000575431 DPY19L2P1Q6NXN4 242 aa10.11□□□□□ -0.79
CCDC40-214ENST00000575431 CLEC20AQ6ZU45 233 aa10.11□□□□□ -0.79
CCDC40-214ENST00000575431 GAREM2Q75VX8 874 aa10.11□□□□□ -0.79
CCDC40-214ENST00000575431 FAM71AQ8IYT1 594 aa10.11□□□□□ -0.79
CCDC40-214ENST00000575431 STKLD1Q8NE28 680 aa10.11□□□□□ -0.79
CCDC40-214ENST00000575431 ZMIZ2Q8NF64 920 aa10.11□□□□□ -0.79
CCDC40-214ENST00000575431 SHKBP1Q8TBC3 707 aa10.11□□□□□ -0.79
CCDC40-214ENST00000575431 FEZF2Q8TBJ5 459 aa10.11□□□□□ -0.79
CCDC40-214ENST00000575431 GPR152Q8TDT2 470 aa10.11□□□□□ -0.79
CCDC40-214ENST00000575431 ZNF606Q8WXB4 792 aa10.11□□□□□ -0.79
CCDC40-214ENST00000575431 IQCDQ96DY2 449 aa10.11□□□□□ -0.79
CCDC40-214ENST00000575431 SPAG5Q96R06 1193 aa10.11□□□□□ -0.79
CCDC40-214ENST00000575431 MYADMQ96S97 322 aa10.11□□□□□ -0.79
CCDC40-214ENST00000575431 SMOQ99835 787 aa10.11□□□□□ -0.79
CCDC40-214ENST00000575431 NUP58Q9BVL2 599 aa10.11□□□□□ -0.79
CCDC40-214ENST00000575431 NAA15Q9BXJ9 866 aaKnown RBP10.11□□□□□ -0.79
CCDC40-214ENST00000575431 TASP1Q9H6P5 420 aa10.11□□□□□ -0.79
CCDC40-214ENST00000575431 TRPM5Q9NZQ8 1165 aa10.11□□□□□ -0.79
CCDC40-214ENST00000575431 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.11□□□□□ -0.79
CCDC40-214ENST00000575431 SIK3Q9Y2K2 1263 aa10.11□□□□□ -0.79
CCDC40-214ENST00000575431 TCF20Q9UGU0 1960 aaKnown RBP10.11□□□□□ -0.79
CCDC40-214ENST00000575431 NOTCH4Q99466 2003 aa10.11□□□□□ -0.79
CCDC40-214ENST00000575431 GREB1Q4ZG55 1949 aa10.1□□□□□ -0.79
CCDC40-214ENST00000575431 FAM92AA1XBS5 289 aa10.1□□□□□ -0.79
CCDC40-214ENST00000575431 ANHXE9PGG2 379 aa10.1□□□□□ -0.79
CCDC40-214ENST00000575431 TNFRSF10BO14763 440 aa10.1□□□□□ -0.79
CCDC40-214ENST00000575431 XPO1O14980 1071 aaKnown RBP10.1□□□□□ -0.79
CCDC40-214ENST00000575431 MOSPD3O75425 235 aa10.1□□□□□ -0.79
CCDC40-214ENST00000575431 GNA15P30679 374 aa10.1□□□□□ -0.79
CCDC40-214ENST00000575431 CCR2P41597 374 aa10.1□□□□□ -0.79
CCDC40-214ENST00000575431 STAT1P42224 750 aa10.1□□□□□ -0.79
CCDC40-214ENST00000575431 PLA2G4AP47712 749 aa10.1□□□□□ -0.79
CCDC40-214ENST00000575431 PSEN1P49768 467 aa10.1□□□□□ -0.79
CCDC40-214ENST00000575431 CDR1P51861 262 aa10.1□□□□□ -0.79
CCDC40-214ENST00000575431 SLC5A3P53794 718 aa10.1□□□□□ -0.79
CCDC40-214ENST00000575431 CACNA2D1P54289 1103 aa10.1□□□□□ -0.79
CCDC40-214ENST00000575431 UBASH3AP57075 661 aa10.1□□□□□ -0.79
CCDC40-214ENST00000575431 POLR2FP61218 127 aaKnown RBP10.1□□□□□ -0.79
CCDC40-214ENST00000575431 MTMR3Q13615 1198 aa10.1□□□□□ -0.79
CCDC40-214ENST00000575431 NR1I3Q14994 352 aa10.1□□□□□ -0.79
CCDC40-214ENST00000575431 TEAD2Q15562 447 aa10.1□□□□□ -0.79
CCDC40-214ENST00000575431 GOLGA7BQ2TAP0 167 aa10.1□□□□□ -0.79
CCDC40-214ENST00000575431 GPR158Q5T848 1215 aa10.1□□□□□ -0.79
CCDC40-214ENST00000575431 SDHAF4Q5VUM1 108 aa10.1□□□□□ -0.79
CCDC40-214ENST00000575431 GJB7Q6PEY0 223 aa10.1□□□□□ -0.79
CCDC40-214ENST00000575431 CACNA2D4Q7Z3S7 1137 aa10.1□□□□□ -0.79
CCDC40-214ENST00000575431 MON1AQ86VX9 555 aa10.1□□□□□ -0.79
CCDC40-214ENST00000575431 RNF135Q8IUD6 432 aa10.1□□□□□ -0.79
CCDC40-214ENST00000575431 KCTD13Q8WZ19 329 aa10.1□□□□□ -0.79
CCDC40-214ENST00000575431 MCRS1Q96EZ8 462 aa10.1□□□□□ -0.79
CCDC40-214ENST00000575431 EDEM3Q9BZQ6 932 aa10.1□□□□□ -0.79
CCDC40-214ENST00000575431 GANQ9H2C0 597 aa10.1□□□□□ -0.79
CCDC40-214ENST00000575431 TRPV4Q9HBA0 871 aa10.1□□□□□ -0.79
CCDC40-214ENST00000575431 LRRC4Q9HBW1 653 aa10.1□□□□□ -0.79
CCDC40-214ENST00000575431 ZFP14Q9HCL3 533 aa10.1□□□□□ -0.79
CCDC40-214ENST00000575431 ZNF334Q9HCZ1 680 aaPredicted RBP10.1□□□□□ -0.79
CCDC40-214ENST00000575431 FAM207AQ9NSI2 230 aaPredicted RBP10.1□□□□□ -0.79
CCDC40-214ENST00000575431 OBP2AQ9NY56 170 aa10.1□□□□□ -0.79
CCDC40-214ENST00000575431 MYO6Q9UM54 1294 aa10.1□□□□□ -0.79
CCDC40-214ENST00000575431 FHOD1Q9Y613 1164 aa10.1□□□□□ -0.79
CCDC40-214ENST00000575431 MYH10P35580 1976 aa10.09□□□□□ -0.79
CCDC40-214ENST00000575431 ZNF840PA6NDX5 716 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms