RNA–Protein interactions for RNA: ENST00000574933.1

CCDC40-213, Transcript of coiled-coil domain containing 40, humanhuman

TSL 3

Gene CCDC40, Length 326 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-213ENST00000574933 XPO1O14980 1071 aaKnown RBP19.23■□□□□ 0.67
CCDC40-213ENST00000574933 XYLBO75191 536 aa19.23■□□□□ 0.67
CCDC40-213ENST00000574933 TPM1P09493 284 aa19.23■□□□□ 0.67
CCDC40-213ENST00000574933 ANXA13P27216 316 aa19.23■□□□□ 0.67
CCDC40-213ENST00000574933 KRT9P35527 623 aa19.23■□□□□ 0.67
CCDC40-213ENST00000574933 GPD2P43304 727 aa19.23■□□□□ 0.67
CCDC40-213ENST00000574933 RPL34P49207 117 aaKnown RBP19.23■□□□□ 0.67
CCDC40-213ENST00000574933 GPR15P49685 360 aa19.23■□□□□ 0.67
CCDC40-213ENST00000574933 EPHA5P54756 1037 aa19.23■□□□□ 0.67
CCDC40-213ENST00000574933 DDR2Q16832 855 aa19.23■□□□□ 0.67
CCDC40-213ENST00000574933 ITIH5Q86UX2 942 aa19.23■□□□□ 0.67
CCDC40-213ENST00000574933 SCN4BQ8IWT1 228 aa19.23■□□□□ 0.67
CCDC40-213ENST00000574933 C12orf76Q8N812 135 aaPredicted RBP19.23■□□□□ 0.67
CCDC40-213ENST00000574933 SMRP1Q8NCR6 262 aa19.23■□□□□ 0.67
CCDC40-213ENST00000574933 SLC35F5Q8WV83 523 aa19.23■□□□□ 0.67
CCDC40-213ENST00000574933 CPLX3Q8WVH0 158 aa19.23■□□□□ 0.67
CCDC40-213ENST00000574933 MYRFLQ96LU7 910 aa19.23■□□□□ 0.67
CCDC40-213ENST00000574933 DNAJC7Q99615 494 aa19.23■□□□□ 0.67
CCDC40-213ENST00000574933 SYT11Q9BT88 431 aa19.23■□□□□ 0.67
CCDC40-213ENST00000574933 ADAM7Q9H2U9 754 aa19.23■□□□□ 0.67
CCDC40-213ENST00000574933 AVENQ9NQS1 362 aaPredicted RBP19.23■□□□□ 0.67
CCDC40-213ENST00000574933 COMMD8Q9NX08 183 aa19.23■□□□□ 0.67
CCDC40-213ENST00000574933 CCL16O15467 120 aa19.22■□□□□ 0.67
CCDC40-213ENST00000574933 CSH1P0DML2 217 aa19.22■□□□□ 0.67
CCDC40-213ENST00000574933 CSH2P0DML3 217 aa19.22■□□□□ 0.67
CCDC40-213ENST00000574933 HMGA1P17096 107 aaKnown RBP19.22■□□□□ 0.67
CCDC40-213ENST00000574933 CHRNB2P17787 502 aa19.22■□□□□ 0.67
CCDC40-213ENST00000574933 CDH5P33151 784 aaPredicted RBP19.22■□□□□ 0.67
CCDC40-213ENST00000574933 PLA2G4AP47712 749 aa19.22■□□□□ 0.67
CCDC40-213ENST00000574933 MRE11P49959 708 aa19.22■□□□□ 0.67
CCDC40-213ENST00000574933 MAP3K7CLP57077 242 aa19.22■□□□□ 0.67
CCDC40-213ENST00000574933 SLC8A3P57103 927 aa19.22■□□□□ 0.67
CCDC40-213ENST00000574933 CDR2Q01850 454 aa19.22■□□□□ 0.67
CCDC40-213ENST00000574933 PDE4CQ08493 712 aa19.22■□□□□ 0.67
CCDC40-213ENST00000574933 VEPH1Q14D04 833 aa19.22■□□□□ 0.67
CCDC40-213ENST00000574933 ASIC2Q16515 512 aa19.22■□□□□ 0.67
CCDC40-213ENST00000574933 RARS2Q5T160 578 aaKnown RBP19.22■□□□□ 0.67
CCDC40-213ENST00000574933 DRC7Q8IY82 874 aa19.22■□□□□ 0.67
CCDC40-213ENST00000574933 ELMOD1Q8N336 334 aa19.22■□□□□ 0.67
CCDC40-213ENST00000574933 OR8K1Q8NGG5 319 aa19.22■□□□□ 0.67
CCDC40-213ENST00000574933 STK32AQ8WU08 396 aa19.22■□□□□ 0.67
CCDC40-213ENST00000574933 HLA-CQ95604 372 aa19.22■□□□□ 0.67
CCDC40-213ENST00000574933 TRMT2BQ96GJ1 504 aaKnown RBP19.22■□□□□ 0.67
CCDC40-213ENST00000574933 TTLL2Q9BWV7 592 aa19.22■□□□□ 0.67
CCDC40-213ENST00000574933 LRRC3Q9BY71 257 aa19.22■□□□□ 0.67
CCDC40-213ENST00000574933 CD207Q9UJ71 328 aa19.22■□□□□ 0.67
CCDC40-213ENST00000574933 FAM92AA1XBS5 289 aa19.21■□□□□ 0.67
CCDC40-213ENST00000574933 SLC38A8A6NNN8 435 aa19.21■□□□□ 0.67
CCDC40-213ENST00000574933 M0QYV0 167 aa19.21■□□□□ 0.67
CCDC40-213ENST00000574933 MFAP3LO75121 409 aa19.21■□□□□ 0.67
CCDC40-213ENST00000574933 CFHP08603 1231 aa19.21■□□□□ 0.67
CCDC40-213ENST00000574933 FMO1Q01740 532 aa19.21■□□□□ 0.67
CCDC40-213ENST00000574933 GSE1Q14687 1217 aa19.21■□□□□ 0.67
CCDC40-213ENST00000574933 RAB41Q5JT25 222 aa19.21■□□□□ 0.67
CCDC40-213ENST00000574933 HGSNATQ68CP4 663 aa19.21■□□□□ 0.67
CCDC40-213ENST00000574933 DENND1BQ6P3S1 775 aa19.21■□□□□ 0.67
CCDC40-213ENST00000574933 TMC5Q6UXY8 1006 aa19.21■□□□□ 0.67
CCDC40-213ENST00000574933 DENND5BQ6ZUT9 1274 aa19.21■□□□□ 0.67
CCDC40-213ENST00000574933 DNAJB7Q7Z6W7 309 aaPredicted RBP19.21■□□□□ 0.67
CCDC40-213ENST00000574933 CNGA4Q8IV77 575 aa19.21■□□□□ 0.67
CCDC40-213ENST00000574933 LEMD2Q8NC56 503 aa19.21■□□□□ 0.67
CCDC40-213ENST00000574933 OLIG1Q8TAK6 271 aa19.21■□□□□ 0.67
CCDC40-213ENST00000574933 UBA3Q8TBC4 463 aa19.21■□□□□ 0.67
CCDC40-213ENST00000574933 PPM1EQ8WY54 764 aa19.21■□□□□ 0.67
CCDC40-213ENST00000574933 KCTD13Q8WZ19 329 aa19.21■□□□□ 0.67
CCDC40-213ENST00000574933 SUSD6Q92537 303 aa19.21■□□□□ 0.67
CCDC40-213ENST00000574933 SMG7Q92540 1137 aaKnown RBP19.21■□□□□ 0.67
CCDC40-213ENST00000574933 HSFY1Q96LI6 401 aa19.21■□□□□ 0.67
CCDC40-213ENST00000574933 ZNF512Q96ME7 567 aaPredicted RBP19.21■□□□□ 0.67
CCDC40-213ENST00000574933 CYLDQ9NQC7 956 aa19.21■□□□□ 0.67
CCDC40-213ENST00000574933 BZW2Q9Y6E2 419 aaKnown RBP19.21■□□□□ 0.67
CCDC40-213ENST00000574933 SPDYE4A6NLX3 237 aa19.2■□□□□ 0.66
CCDC40-213ENST00000574933 RTN3O95197 1032 aaPredicted RBP19.2■□□□□ 0.66
CCDC40-213ENST00000574933 LSM8O95777 96 aaKnown RBP19.2■□□□□ 0.66
CCDC40-213ENST00000574933 PTPN2P17706 415 aa19.2■□□□□ 0.66
CCDC40-213ENST00000574933 ARID5AQ03989 594 aa19.2■□□□□ 0.66
CCDC40-213ENST00000574933 SKIV2LQ15477 1246 aaKnown RBP19.2■□□□□ 0.66
CCDC40-213ENST00000574933 SDHAF4Q5VUM1 108 aa19.2■□□□□ 0.66
CCDC40-213ENST00000574933 TRIM72Q6ZMU5 477 aa19.2■□□□□ 0.66
CCDC40-213ENST00000574933 PIGZQ86VD9 579 aa19.2■□□□□ 0.66
CCDC40-213ENST00000574933 TMC8Q8IU68 726 aa19.2■□□□□ 0.66
CCDC40-213ENST00000574933 NUP93Q8N1F7 819 aa19.2■□□□□ 0.66
CCDC40-213ENST00000574933 WDTC1Q8N5D0 677 aa19.2■□□□□ 0.66
CCDC40-213ENST00000574933 FEZF2Q8TBJ5 459 aa19.2■□□□□ 0.66
CCDC40-213ENST00000574933 GIPC2Q8TF65 315 aa19.2■□□□□ 0.66
CCDC40-213ENST00000574933 SLC20A1Q8WUM9 679 aa19.2■□□□□ 0.66
CCDC40-213ENST00000574933 SECISBP2LQ93073 1101 aaKnown RBP19.2■□□□□ 0.66
CCDC40-213ENST00000574933 EHD2Q9NZN4 543 aa19.2■□□□□ 0.66
CCDC40-213ENST00000574933 IMPACTQ9P2X3 320 aa19.2■□□□□ 0.66
CCDC40-213ENST00000574933 DNMT3BQ9UBC3 853 aaKnown RBP19.2■□□□□ 0.66
CCDC40-213ENST00000574933 NUP210Q8TEM1 1887 aaPredicted RBP19.2■□□□□ 0.66
CCDC40-213ENST00000574933 AKR1B15C9JRZ8 316 aaPredicted RBP19.19■□□□□ 0.66
CCDC40-213ENST00000574933 TULP2O00295 520 aa19.19■□□□□ 0.66
CCDC40-213ENST00000574933 CYP1A1P04798 512 aaPredicted RBP19.19■□□□□ 0.66
CCDC40-213ENST00000574933 MMEP08473 750 aa19.19■□□□□ 0.66
CCDC40-213ENST00000574933 KCNA5P22460 613 aa19.19■□□□□ 0.66
CCDC40-213ENST00000574933 MTHFRP42898 656 aa19.19■□□□□ 0.66
CCDC40-213ENST00000574933 KIF11P52732 1056 aa19.19■□□□□ 0.66
CCDC40-213ENST00000574933 SLC5A3P53794 718 aa19.19■□□□□ 0.66
CCDC40-213ENST00000574933 KLHL30Q0D2K2 578 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms