RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 NME8Q8N427 588 aa14.74□□□□□ -0.05
VPS33B-208ENST00000574755 ZNF560Q96MR9 790 aa14.74□□□□□ -0.05
VPS33B-208ENST00000574755 CNPY3Q9BT09 278 aa14.74□□□□□ -0.05
VPS33B-208ENST00000574755 TMEM109Q9BVC6 243 aa14.74□□□□□ -0.05
VPS33B-208ENST00000574755 KPNA7A9QM74 516 aa14.74□□□□□ -0.05
VPS33B-208ENST00000574755 PIRO00625 290 aa14.74□□□□□ -0.05
VPS33B-208ENST00000574755 NDUFAB1O14561 156 aa14.74□□□□□ -0.05
VPS33B-208ENST00000574755 TRUB2O95900 331 aaKnown RBP14.74□□□□□ -0.05
VPS33B-208ENST00000574755 IFNB1P01574 187 aa14.74□□□□□ -0.05
VPS33B-208ENST00000574755 PCK1P35558 622 aa14.74□□□□□ -0.05
VPS33B-208ENST00000574755 CCT5P48643 541 aa14.74□□□□□ -0.05
VPS33B-208ENST00000574755 CDR1P51861 262 aa14.74□□□□□ -0.05
VPS33B-208ENST00000574755 INHBEP58166 350 aa14.74□□□□□ -0.05
VPS33B-208ENST00000574755 OTUD4Q01804 1114 aaKnown RBP14.74□□□□□ -0.05
VPS33B-208ENST00000574755 PDE4CQ08493 712 aa14.74□□□□□ -0.05
VPS33B-208ENST00000574755 GPS1Q13098 491 aa14.74□□□□□ -0.05
VPS33B-208ENST00000574755 CRHR2Q13324 411 aa14.74□□□□□ -0.05
VPS33B-208ENST00000574755 KYNUQ16719 465 aa14.74□□□□□ -0.05
VPS33B-208ENST00000574755 C15orf59Q2T9L4 293 aaPredicted RBP14.74□□□□□ -0.05
VPS33B-208ENST00000574755 PKDCCQ504Y2 493 aa14.74□□□□□ -0.05
VPS33B-208ENST00000574755 UBXN11Q5T124 520 aa14.74□□□□□ -0.05
VPS33B-208ENST00000574755 TWF2Q6IBS0 349 aaKnown RBP14.74□□□□□ -0.05
VPS33B-208ENST00000574755 TRNP1Q6NT89 227 aa14.74□□□□□ -0.05
VPS33B-208ENST00000574755 TTC13Q8NBP0 860 aa14.74□□□□□ -0.05
VPS33B-208ENST00000574755 ACTL9Q8TC94 416 aa14.74□□□□□ -0.05
VPS33B-208ENST00000574755 EPN3Q9H201 632 aa14.74□□□□□ -0.05
VPS33B-208ENST00000574755 DPEP3Q9H4B8 488 aa14.74□□□□□ -0.05
VPS33B-208ENST00000574755 GOLGA2P5Q9HBQ8 144 aa14.74□□□□□ -0.05
VPS33B-208ENST00000574755 IPPQ9Y573 584 aa14.74□□□□□ -0.05
VPS33B-208ENST00000574755 DNALI1O14645 258 aaPredicted RBP14.73□□□□□ -0.05
VPS33B-208ENST00000574755 HCRTO43612 131 aa14.73□□□□□ -0.05
VPS33B-208ENST00000574755 PTGISQ16647 500 aa14.73□□□□□ -0.05
VPS33B-208ENST00000574755 BBS12Q6ZW61 710 aa14.73□□□□□ -0.05
VPS33B-208ENST00000574755 RFX6Q8HWS3 928 aa14.73□□□□□ -0.05
VPS33B-208ENST00000574755 CMASQ8NFW8 434 aaPredicted RBP14.73□□□□□ -0.05
VPS33B-208ENST00000574755 SLC35B2Q8TB61 432 aa14.73□□□□□ -0.05
VPS33B-208ENST00000574755 CFAP57Q96MR6 1250 aa14.73□□□□□ -0.05
VPS33B-208ENST00000574755 ROPN1BQ9BZX4 212 aaPredicted RBP14.73□□□□□ -0.05
VPS33B-208ENST00000574755 STMN4Q9H169 189 aaPredicted RBP14.73□□□□□ -0.05
VPS33B-208ENST00000574755 ADAM7Q9H2U9 754 aa14.73□□□□□ -0.05
VPS33B-208ENST00000574755 ROPN1Q9HAT0 212 aaPredicted RBP14.73□□□□□ -0.05
VPS33B-208ENST00000574755 PPANQ9NQ55 473 aaKnown RBP14.73□□□□□ -0.05
VPS33B-208ENST00000574755 MYADML2A6NDP7 307 aa14.73□□□□□ -0.05
VPS33B-208ENST00000574755 AGTP01019 485 aa14.73□□□□□ -0.05
VPS33B-208ENST00000574755 SLC10A3P09131 477 aa14.73□□□□□ -0.05
VPS33B-208ENST00000574755 PDGFRBP09619 1106 aa14.73□□□□□ -0.05
VPS33B-208ENST00000574755 SETSIPP0DME0 302 aa14.73□□□□□ -0.05
VPS33B-208ENST00000574755 KCNE1P15382 129 aa14.73□□□□□ -0.05
VPS33B-208ENST00000574755 PNPLA4P41247 253 aa14.73□□□□□ -0.05
VPS33B-208ENST00000574755 ATP11AP98196 1134 aa14.73□□□□□ -0.05
VPS33B-208ENST00000574755 TAZQ16635 292 aa14.73□□□□□ -0.05
VPS33B-208ENST00000574755 LONRF1Q17RB8 773 aa14.73□□□□□ -0.05
VPS33B-208ENST00000574755 OLFML1Q6UWY5 402 aa14.73□□□□□ -0.05
VPS33B-208ENST00000574755 SCUBE3Q8IX30 993 aa14.73□□□□□ -0.05
VPS33B-208ENST00000574755 ZCCHC9Q8N567 271 aaKnown RBP14.73□□□□□ -0.05
VPS33B-208ENST00000574755 SLC35F5Q8WV83 523 aa14.73□□□□□ -0.05
VPS33B-208ENST00000574755 PEBP4Q96S96 227 aa14.73□□□□□ -0.05
VPS33B-208ENST00000574755 LPIN3Q9BQK8 851 aa14.73□□□□□ -0.05
VPS33B-208ENST00000574755 CNOT10Q9H9A5 744 aaKnown RBP14.73□□□□□ -0.05
VPS33B-208ENST00000574755 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.73□□□□□ -0.05
VPS33B-208ENST00000574755 E7EVH7 732 aa14.72□□□□□ -0.05
VPS33B-208ENST00000574755 SPTLC1O15269 473 aa14.72□□□□□ -0.05
VPS33B-208ENST00000574755 PRPSAP2O60256 369 aa14.72□□□□□ -0.05
VPS33B-208ENST00000574755 HOXC8P31273 242 aa14.72□□□□□ -0.05
VPS33B-208ENST00000574755 GNL1P36915 607 aaPredicted RBP14.72□□□□□ -0.05
VPS33B-208ENST00000574755 TAF6P49848 677 aa14.72□□□□□ -0.05
VPS33B-208ENST00000574755 SEC24CP53992 1094 aa14.72□□□□□ -0.05
VPS33B-208ENST00000574755 SNX16P57768 344 aa14.72□□□□□ -0.05
VPS33B-208ENST00000574755 IFI35P80217 286 aaPredicted RBP14.72□□□□□ -0.05
VPS33B-208ENST00000574755 GNASQ5JWF2 1037 aa14.72□□□□□ -0.05
VPS33B-208ENST00000574755 TAF2Q6P1X5 1199 aa14.72□□□□□ -0.05
VPS33B-208ENST00000574755 KBTBD7Q8WVZ9 684 aa14.72□□□□□ -0.05
VPS33B-208ENST00000574755 RBM15Q96T37 977 aaKnown RBP eCLIP14.72□□□□□ -0.05
VPS33B-208ENST00000574755 SLC4A5Q9BY07 1137 aa14.72□□□□□ -0.05
VPS33B-208ENST00000574755 FRMD8P1Q9BZ68 369 aaPredicted RBP14.72□□□□□ -0.05
VPS33B-208ENST00000574755 RSAD1Q9HA92 442 aa14.72□□□□□ -0.05
VPS33B-208ENST00000574755 PCDH9Q9HC56 1237 aa14.72□□□□□ -0.05
VPS33B-208ENST00000574755 NINJ2Q9NZG7 142 aa14.72□□□□□ -0.05
VPS33B-208ENST00000574755 TPX2Q9ULW0 747 aaKnown RBP14.72□□□□□ -0.05
VPS33B-208ENST00000574755 M0QZ92 97 aa14.71□□□□□ -0.05
VPS33B-208ENST00000574755 DUSP11O75319 330 aaKnown RBP14.71□□□□□ -0.05
VPS33B-208ENST00000574755 IGHA2P01877 340 aa14.71□□□□□ -0.05
VPS33B-208ENST00000574755 CCDC130P13994 396 aa14.71□□□□□ -0.05
VPS33B-208ENST00000574755 CTGFP29279 349 aa14.71□□□□□ -0.05
VPS33B-208ENST00000574755 CDH6P55285 790 aa14.71□□□□□ -0.05
VPS33B-208ENST00000574755 SLC6A3Q01959 620 aa14.71□□□□□ -0.05
VPS33B-208ENST00000574755 SOX4Q06945 474 aaPredicted RBP14.71□□□□□ -0.05
VPS33B-208ENST00000574755 AUHQ13825 339 aaKnown RBP14.71□□□□□ -0.05
VPS33B-208ENST00000574755 RAB6CQ53S08 254 aa14.71□□□□□ -0.05
VPS33B-208ENST00000574755 XKR4Q5GH76 650 aa14.71□□□□□ -0.05
VPS33B-208ENST00000574755 CEP128Q6ZU80 1094 aa14.71□□□□□ -0.05
VPS33B-208ENST00000574755 TMEM110Q86TL2 294 aa14.71□□□□□ -0.05
VPS33B-208ENST00000574755 SMG8Q8ND04 991 aaKnown RBP14.71□□□□□ -0.05
VPS33B-208ENST00000574755 APPL2Q8NEU8 664 aa14.71□□□□□ -0.05
VPS33B-208ENST00000574755 C9orf72Q96LT7 481 aa14.71□□□□□ -0.05
VPS33B-208ENST00000574755 SELENOSQ9BQE4 189 aa14.71□□□□□ -0.05
VPS33B-208ENST00000574755 RAB6CQ9H0N0 254 aa14.71□□□□□ -0.05
VPS33B-208ENST00000574755 SNX25Q9H3E2 840 aa14.71□□□□□ -0.05
VPS33B-208ENST00000574755 NGRNQ9NPE2 291 aaKnown RBP14.71□□□□□ -0.05
VPS33B-208ENST00000574755 GDAP2Q9NXN4 497 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms