RNA–Protein interactions for RNA: ENST00000574545.1

SCARF1-208, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 894 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-208ENST00000574545 GKN1Q9NS71 199 aa20.96■□□□□ 0.95
SCARF1-208ENST00000574545 NDRG2Q9UN36 371 aaKnown RBP20.96■□□□□ 0.95
SCARF1-208ENST00000574545 PATJQ8NI35 1801 aa20.95■□□□□ 0.94
SCARF1-208ENST00000574545 SPECC1L-ADORA2AF8WAN1 911 aa20.95■□□□□ 0.94
SCARF1-208ENST00000574545 C1orf228Q6PIY5 440 aa20.95■□□□□ 0.94
SCARF1-208ENST00000574545 RALGPS2Q86X27 583 aaPredicted RBP20.95■□□□□ 0.94
SCARF1-208ENST00000574545 ADSSL1Q8N142 457 aa20.95■□□□□ 0.94
SCARF1-208ENST00000574545 EEF2KMTQ96G04 330 aa20.95■□□□□ 0.94
SCARF1-208ENST00000574545 CHRDQ9H2X0 955 aa20.95■□□□□ 0.94
SCARF1-208ENST00000574545 LMAN1LQ9HAT1 526 aa20.95■□□□□ 0.94
SCARF1-208ENST00000574545 SPATA6Q9NWH7 488 aaPredicted RBP20.95■□□□□ 0.94
SCARF1-208ENST00000574545 THG1LQ9NWX6 298 aaKnown RBP20.95■□□□□ 0.94
SCARF1-208ENST00000574545 FBXO4Q9UKT5 387 aa20.95■□□□□ 0.94
SCARF1-208ENST00000574545 ZNF638Q14966 1978 aaKnown RBP20.95■□□□□ 0.94
SCARF1-208ENST00000574545 FAM186AA6NE01 2351 aa20.95■□□□□ 0.94
SCARF1-208ENST00000574545 FANCMQ8IYD8 2048 aa20.94■□□□□ 0.94
SCARF1-208ENST00000574545 C2orf78A6NCI8 922 aa20.94■□□□□ 0.94
SCARF1-208ENST00000574545 ZNF840PA6NDX5 716 aa20.94■□□□□ 0.94
SCARF1-208ENST00000574545 PRR23AA6NEV1 266 aa20.94■□□□□ 0.94
SCARF1-208ENST00000574545 GFRA3O60609 400 aa20.94■□□□□ 0.94
SCARF1-208ENST00000574545 SMC2O95347 1197 aa20.94■□□□□ 0.94
SCARF1-208ENST00000574545 KRT13P13646 458 aa20.94■□□□□ 0.94
SCARF1-208ENST00000574545 P4HA1P13674 534 aa20.94■□□□□ 0.94
SCARF1-208ENST00000574545 ANXA13P27216 316 aa20.94■□□□□ 0.94
SCARF1-208ENST00000574545 GTF2H1P32780 548 aa20.94■□□□□ 0.94
SCARF1-208ENST00000574545 CTHP32929 405 aa20.94■□□□□ 0.94
SCARF1-208ENST00000574545 PMS1P54277 932 aaKnown RBP20.94■□□□□ 0.94
SCARF1-208ENST00000574545 ZNF77Q15935 545 aa20.94■□□□□ 0.94
SCARF1-208ENST00000574545 ZNF528Q3MIS6 628 aa20.94■□□□□ 0.94
SCARF1-208ENST00000574545 UNC93AQ86WB7 457 aa20.94■□□□□ 0.94
SCARF1-208ENST00000574545 FUKQ8N0W3 1084 aa20.94■□□□□ 0.94
SCARF1-208ENST00000574545 ARL14EPQ8N8R7 260 aaPredicted RBP20.94■□□□□ 0.94
SCARF1-208ENST00000574545 TTC8Q8TAM2 541 aa20.94■□□□□ 0.94
SCARF1-208ENST00000574545 SMARCE1Q969G3 411 aa20.94■□□□□ 0.94
SCARF1-208ENST00000574545 CHFRQ96EP1 664 aa20.94■□□□□ 0.94
SCARF1-208ENST00000574545 TNIP3Q96KP6 325 aa20.94■□□□□ 0.94
SCARF1-208ENST00000574545 KCNK16Q96T55 309 aa20.94■□□□□ 0.94
SCARF1-208ENST00000574545 TMEM8AQ9HCN3 771 aa20.94■□□□□ 0.94
SCARF1-208ENST00000574545 IL37Q9NZH6 218 aa20.94■□□□□ 0.94
SCARF1-208ENST00000574545 HMGXB4Q9UGU5 601 aa20.94■□□□□ 0.94
SCARF1-208ENST00000574545 CIZ1Q9ULV3 898 aaPredicted RBP20.94■□□□□ 0.94
SCARF1-208ENST00000574545 OTOL1A6NHN0 477 aaPredicted RBP20.93■□□□□ 0.94
SCARF1-208ENST00000574545 TNFRSF10BO14763 440 aa20.93■□□□□ 0.94
SCARF1-208ENST00000574545 CETN3O15182 167 aa20.93■□□□□ 0.94
SCARF1-208ENST00000574545 LAMTOR5O43504 91 aa20.93■□□□□ 0.94
SCARF1-208ENST00000574545 GADD45BO75293 160 aaPredicted RBP20.93■□□□□ 0.94
SCARF1-208ENST00000574545 USP17L7P0C7H9 530 aa20.93■□□□□ 0.94
SCARF1-208ENST00000574545 TCF3P15923 654 aa20.93■□□□□ 0.94
SCARF1-208ENST00000574545 PFKLP17858 780 aa20.93■□□□□ 0.94
SCARF1-208ENST00000574545 PIK3CAP42336 1068 aa20.93■□□□□ 0.94
SCARF1-208ENST00000574545 KPNA1P52294 538 aaPredicted RBP20.93■□□□□ 0.94
SCARF1-208ENST00000574545 NDST1P52848 882 aa20.93■□□□□ 0.94
SCARF1-208ENST00000574545 ZXDBP98169 803 aa20.93■□□□□ 0.94
SCARF1-208ENST00000574545 INCA1Q0VD86 236 aa20.93■□□□□ 0.94
SCARF1-208ENST00000574545 MTAPQ13126 283 aa20.93■□□□□ 0.94
SCARF1-208ENST00000574545 GAS6Q14393 721 aa20.93■□□□□ 0.94
SCARF1-208ENST00000574545 KRT39Q6A163 491 aa20.93■□□□□ 0.94
SCARF1-208ENST00000574545 ANKRD40Q6AI12 368 aa20.93■□□□□ 0.94
SCARF1-208ENST00000574545 ACOT1Q86TX2 421 aa20.93■□□□□ 0.94
SCARF1-208ENST00000574545 FAM35AQ86V20 835 aa20.93■□□□□ 0.94
SCARF1-208ENST00000574545 NELL1Q92832 810 aa20.93■□□□□ 0.94
SCARF1-208ENST00000574545 TWNKQ96RR1 684 aa20.93■□□□□ 0.94
SCARF1-208ENST00000574545 TRPC7Q9HCX4 862 aa20.93■□□□□ 0.94
SCARF1-208ENST00000574545 EHD2Q9NZN4 543 aa20.93■□□□□ 0.94
SCARF1-208ENST00000574545 TRPM5Q9NZQ8 1165 aa20.93■□□□□ 0.94
SCARF1-208ENST00000574545 TRAV19A0A0A6YYK7 116 aa20.92■□□□□ 0.94
SCARF1-208ENST00000574545 OLFM2O95897 454 aa20.92■□□□□ 0.94
SCARF1-208ENST00000574545 HDCP19113 662 aa20.92■□□□□ 0.94
SCARF1-208ENST00000574545 PPP3CCP48454 512 aa20.92■□□□□ 0.94
SCARF1-208ENST00000574545 TAF10Q12962 218 aa20.92■□□□□ 0.94
SCARF1-208ENST00000574545 USP4Q13107 963 aa20.92■□□□□ 0.94
SCARF1-208ENST00000574545 RUNX3Q13761 415 aa20.92■□□□□ 0.94
SCARF1-208ENST00000574545 ITPRIPL2Q3MIP1 535 aa20.92■□□□□ 0.94
SCARF1-208ENST00000574545 TRIM68Q6AZZ1 485 aa20.92■□□□□ 0.94
SCARF1-208ENST00000574545 NUP93Q8N1F7 819 aa20.92■□□□□ 0.94
SCARF1-208ENST00000574545 ZMIZ2Q8NF64 920 aa20.92■□□□□ 0.94
SCARF1-208ENST00000574545 WHAMMQ8TF30 809 aa20.92■□□□□ 0.94
SCARF1-208ENST00000574545 SEMA4DQ92854 862 aa20.92■□□□□ 0.94
SCARF1-208ENST00000574545 NKD2Q969F2 451 aaPredicted RBP20.92■□□□□ 0.94
SCARF1-208ENST00000574545 CYP3A43Q9HB55 503 aa20.92■□□□□ 0.94
SCARF1-208ENST00000574545 PRMT8Q9NR22 394 aaPredicted RBP20.92■□□□□ 0.94
SCARF1-208ENST00000574545 ARHGAP26Q9UNA1 814 aa20.92■□□□□ 0.94
SCARF1-208ENST00000574545 R4GN57 208 aa20.92■□□□□ 0.94
SCARF1-208ENST00000574545 FAM92AA1XBS5 289 aa20.91■□□□□ 0.94
SCARF1-208ENST00000574545 CKMP06732 381 aa20.91■□□□□ 0.94
SCARF1-208ENST00000574545 CD44P16070 742 aaKnown RBP20.91■□□□□ 0.94
SCARF1-208ENST00000574545 FKBP3Q00688 224 aaKnown RBP20.91■□□□□ 0.94
SCARF1-208ENST00000574545 ORC1Q13415 861 aa20.91■□□□□ 0.94
SCARF1-208ENST00000574545 MTF1Q14872 753 aa20.91■□□□□ 0.94
SCARF1-208ENST00000574545 C12orf29Q8N999 325 aa20.91■□□□□ 0.94
SCARF1-208ENST00000574545 SMOQ99835 787 aa20.91■□□□□ 0.94
SCARF1-208ENST00000574545 IER2Q9BTL4 223 aa20.91■□□□□ 0.94
SCARF1-208ENST00000574545 GTPBP4Q9BZE4 634 aaKnown RBP20.91■□□□□ 0.94
SCARF1-208ENST00000574545 RNF38Q9H0F5 515 aa20.91■□□□□ 0.94
SCARF1-208ENST00000574545 SEMA4AQ9H3S1 761 aa20.91■□□□□ 0.94
SCARF1-208ENST00000574545 EBF3Q9H4W6 596 aa20.91■□□□□ 0.94
SCARF1-208ENST00000574545 CSNK1G1Q9HCP0 422 aa20.91■□□□□ 0.94
SCARF1-208ENST00000574545 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.91■□□□□ 0.94
SCARF1-208ENST00000574545 MAN1B1Q9UKM7 699 aa20.91■□□□□ 0.94
SCARF1-208ENST00000574545 CFAP54Q96N23 3096 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms