RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 PRMT8Q9NR22 394 aaPredicted RBP10.3□□□□□ -0.76
NPLOC4-216ENST00000574344 GKN1Q9NS71 199 aa10.3□□□□□ -0.76
NPLOC4-216ENST00000574344 ZSCAN32Q9NX65 697 aa10.3□□□□□ -0.76
NPLOC4-216ENST00000574344 EHD2Q9NZN4 543 aa10.3□□□□□ -0.76
NPLOC4-216ENST00000574344 NCDNQ9UBB6 729 aa10.3□□□□□ -0.76
NPLOC4-216ENST00000574344 HPSEQ9Y251 543 aa10.3□□□□□ -0.76
NPLOC4-216ENST00000574344 FRMD4BQ9Y2L6 1034 aa10.3□□□□□ -0.76
NPLOC4-216ENST00000574344 MYOFQ9NZM1 2061 aa10.3□□□□□ -0.76
NPLOC4-216ENST00000574344 SPAG17Q6Q759 2223 aa10.3□□□□□ -0.76
NPLOC4-216ENST00000574344 DMXL1Q9Y485 3027 aa10.3□□□□□ -0.76
NPLOC4-216ENST00000574344 ATP8B3O60423 1300 aa10.3□□□□□ -0.76
NPLOC4-216ENST00000574344 EML5Q05BV3 1969 aa10.29□□□□□ -0.76
NPLOC4-216ENST00000574344 F8VP50 259 aa10.29□□□□□ -0.76
NPLOC4-216ENST00000574344 GOLGA6L19H0YKK7 550 aa10.29□□□□□ -0.76
NPLOC4-216ENST00000574344 PDXKO00764 312 aa10.29□□□□□ -0.76
NPLOC4-216ENST00000574344 ABL1P00519 1130 aa10.29□□□□□ -0.76
NPLOC4-216ENST00000574344 PRR29P0C7W0 189 aa10.29□□□□□ -0.76
NPLOC4-216ENST00000574344 CHRNB1P11230 501 aa10.29□□□□□ -0.76
NPLOC4-216ENST00000574344 P4HA1P13674 534 aa10.29□□□□□ -0.76
NPLOC4-216ENST00000574344 PIK3CAP42336 1068 aa10.29□□□□□ -0.76
NPLOC4-216ENST00000574344 RAP1GAPP47736 663 aa10.29□□□□□ -0.76
NPLOC4-216ENST00000574344 CXCL12P48061 93 aa10.29□□□□□ -0.76
NPLOC4-216ENST00000574344 IFNAR2P48551 515 aa10.29□□□□□ -0.76
NPLOC4-216ENST00000574344 PDE6CP51160 858 aa10.29□□□□□ -0.76
NPLOC4-216ENST00000574344 AP3M2P53677 418 aa10.29□□□□□ -0.76
NPLOC4-216ENST00000574344 NRLP54845 237 aa10.29□□□□□ -0.76
NPLOC4-216ENST00000574344 TPM4P67936 248 aa10.29□□□□□ -0.76
NPLOC4-216ENST00000574344 RUNX3Q13761 415 aa10.29□□□□□ -0.76
NPLOC4-216ENST00000574344 NCOA4Q13772 614 aa10.29□□□□□ -0.76
NPLOC4-216ENST00000574344 MTF1Q14872 753 aa10.29□□□□□ -0.76
NPLOC4-216ENST00000574344 DGKKQ5KSL6 1271 aa10.29□□□□□ -0.76
NPLOC4-216ENST00000574344 TDRD10Q5VZ19 366 aaKnown RBP10.29□□□□□ -0.76
NPLOC4-216ENST00000574344 LIMS2Q7Z4I7 341 aa10.29□□□□□ -0.76
NPLOC4-216ENST00000574344 KIAA2013Q8IYS2 634 aa10.29□□□□□ -0.76
NPLOC4-216ENST00000574344 B3GALNT2Q8NCR0 500 aa10.29□□□□□ -0.76
NPLOC4-216ENST00000574344 MYCBPAPQ8TBZ2 947 aa10.29□□□□□ -0.76
NPLOC4-216ENST00000574344 PARD3BQ8TEW8 1205 aa10.29□□□□□ -0.76
NPLOC4-216ENST00000574344 RUBCNQ92622 972 aa10.29□□□□□ -0.76
NPLOC4-216ENST00000574344 SECISBP2LQ93073 1101 aaKnown RBP10.29□□□□□ -0.76
NPLOC4-216ENST00000574344 MYRFLQ96LU7 910 aa10.29□□□□□ -0.76
NPLOC4-216ENST00000574344 FUCA2Q9BTY2 467 aa10.29□□□□□ -0.76
NPLOC4-216ENST00000574344 FAM126AQ9BYI3 521 aaPredicted RBP10.29□□□□□ -0.76
NPLOC4-216ENST00000574344 ELOVL4Q9GZR5 314 aa10.29□□□□□ -0.76
NPLOC4-216ENST00000574344 DPEP3Q9H4B8 488 aa10.29□□□□□ -0.76
NPLOC4-216ENST00000574344 SMYD3Q9H7B4 428 aa10.29□□□□□ -0.76
NPLOC4-216ENST00000574344 ANO10Q9NW15 660 aa10.29□□□□□ -0.76
NPLOC4-216ENST00000574344 TRPM5Q9NZQ8 1165 aa10.29□□□□□ -0.76
NPLOC4-216ENST00000574344 RAB23Q9ULC3 237 aa10.29□□□□□ -0.76
NPLOC4-216ENST00000574344 EP300Q09472 2414 aaPredicted RBP10.28□□□□□ -0.76
NPLOC4-216ENST00000574344 GVINP1Q7Z2Y8 2422 aa10.28□□□□□ -0.76
NPLOC4-216ENST00000574344 C2orf78A6NCI8 922 aa10.28□□□□□ -0.76
NPLOC4-216ENST00000574344 SOBPA7XYQ1 873 aa10.28□□□□□ -0.76
NPLOC4-216ENST00000574344 CLDN5O00501 218 aa10.28□□□□□ -0.76
NPLOC4-216ENST00000574344 STAU1O95793 577 aaKnown RBP10.28□□□□□ -0.76
NPLOC4-216ENST00000574344 TPM3P06753 285 aa10.28□□□□□ -0.76
NPLOC4-216ENST00000574344 ARSAP15289 507 aa10.28□□□□□ -0.76
NPLOC4-216ENST00000574344 PTPN1P18031 435 aaKnown RBP10.28□□□□□ -0.76
NPLOC4-216ENST00000574344 TRIM21P19474 475 aaKnown RBP10.28□□□□□ -0.76
NPLOC4-216ENST00000574344 CDH8P55286 799 aa10.28□□□□□ -0.76
NPLOC4-216ENST00000574344 AMPD2Q01433 879 aa10.28□□□□□ -0.76
NPLOC4-216ENST00000574344 SATB1Q01826 763 aa10.28□□□□□ -0.76
NPLOC4-216ENST00000574344 ZNF268Q14587 947 aaPredicted RBP10.28□□□□□ -0.76
NPLOC4-216ENST00000574344 PDGFRLQ15198 375 aa10.28□□□□□ -0.76
NPLOC4-216ENST00000574344 KRBA2Q6ZNG9 492 aa10.28□□□□□ -0.76
NPLOC4-216ENST00000574344 Q6ZS52 159 aa10.28□□□□□ -0.76
NPLOC4-216ENST00000574344 SLC9A9Q8IVB4 645 aa10.28□□□□□ -0.76
NPLOC4-216ENST00000574344 ZNF687Q8N1G0 1237 aa10.28□□□□□ -0.76
NPLOC4-216ENST00000574344 SPEM1Q8N4L4 309 aa10.28□□□□□ -0.76
NPLOC4-216ENST00000574344 CPA6Q8N4T0 437 aa10.28□□□□□ -0.76
NPLOC4-216ENST00000574344 ARL14EPQ8N8R7 260 aaPredicted RBP10.28□□□□□ -0.76
NPLOC4-216ENST00000574344 PLEKHO2Q8TD55 490 aa10.28□□□□□ -0.76
NPLOC4-216ENST00000574344 EXOC4Q96A65 974 aa10.28□□□□□ -0.76
NPLOC4-216ENST00000574344 ELMO3Q96BJ8 720 aa10.28□□□□□ -0.76
NPLOC4-216ENST00000574344 PDLIM2Q96JY6 352 aa10.28□□□□□ -0.76
NPLOC4-216ENST00000574344 TNIP3Q96KP6 325 aa10.28□□□□□ -0.76
NPLOC4-216ENST00000574344 SPATA17Q96L03 361 aa10.28□□□□□ -0.76
NPLOC4-216ENST00000574344 SLITRK1Q96PX8 696 aa10.28□□□□□ -0.76
NPLOC4-216ENST00000574344 SLC22A12Q96S37 553 aa10.28□□□□□ -0.76
NPLOC4-216ENST00000574344 CYP2S1Q96SQ9 504 aa10.28□□□□□ -0.76
NPLOC4-216ENST00000574344 IMPG2Q9BZV3 1241 aa10.28□□□□□ -0.76
NPLOC4-216ENST00000574344 ZNF518BQ9C0D4 1074 aa10.28□□□□□ -0.76
NPLOC4-216ENST00000574344 KCTD10Q9H3F6 313 aa10.28□□□□□ -0.76
NPLOC4-216ENST00000574344 MMRN2Q9H8L6 949 aa10.28□□□□□ -0.76
NPLOC4-216ENST00000574344 HPS4Q9NQG7 708 aa10.28□□□□□ -0.76
NPLOC4-216ENST00000574344 DUS2Q9NX74 493 aaKnown RBP10.28□□□□□ -0.76
NPLOC4-216ENST00000574344 SMG5Q9UPR3 1016 aaKnown RBP10.28□□□□□ -0.76
NPLOC4-216ENST00000574344 MAPK8IP1Q9UQF2 711 aa10.28□□□□□ -0.76
NPLOC4-216ENST00000574344 OTOGLQ3ZCN5 2332 aa10.27□□□□□ -0.77
NPLOC4-216ENST00000574344 RHOBTB3O94955 611 aa10.27□□□□□ -0.77
NPLOC4-216ENST00000574344 ZNF202O95125 648 aa10.27□□□□□ -0.77
NPLOC4-216ENST00000574344 KRT13P13646 458 aa10.27□□□□□ -0.77
NPLOC4-216ENST00000574344 HDCP19113 662 aa10.27□□□□□ -0.77
NPLOC4-216ENST00000574344 NR2F2P24468 414 aa10.27□□□□□ -0.77
NPLOC4-216ENST00000574344 USP46P62068 366 aa10.27□□□□□ -0.77
NPLOC4-216ENST00000574344 DLG4P78352 724 aa10.27□□□□□ -0.77
NPLOC4-216ENST00000574344 GRSF1Q12849 480 aaKnown RBP eCLIP10.27□□□□□ -0.77
NPLOC4-216ENST00000574344 USP4Q13107 963 aa10.27□□□□□ -0.77
NPLOC4-216ENST00000574344 GAS6Q14393 721 aa10.27□□□□□ -0.77
NPLOC4-216ENST00000574344 ZNF77Q15935 545 aa10.27□□□□□ -0.77
NPLOC4-216ENST00000574344 ANO6Q4KMQ2 910 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms