RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 DDX6P26196 483 aaKnown RBP eCLIP12.06□□□□□ -0.48
RPAIN-214ENST00000574003 ANXA13P27216 316 aa12.06□□□□□ -0.48
RPAIN-214ENST00000574003 PIK3CAP42336 1068 aa12.06□□□□□ -0.48
RPAIN-214ENST00000574003 VAMP7P51809 220 aa12.06□□□□□ -0.48
RPAIN-214ENST00000574003 BECN1Q14457 450 aa12.06□□□□□ -0.48
RPAIN-214ENST00000574003 ITPRIPL2Q3MIP1 535 aa12.06□□□□□ -0.48
RPAIN-214ENST00000574003 VSTM1Q6UX27 236 aa12.06□□□□□ -0.48
RPAIN-214ENST00000574003 DENND5BQ6ZUT9 1274 aa12.06□□□□□ -0.48
RPAIN-214ENST00000574003 PAQR9Q6ZVX9 377 aa12.06□□□□□ -0.48
RPAIN-214ENST00000574003 ACOT1Q86TX2 421 aa12.06□□□□□ -0.48
RPAIN-214ENST00000574003 FMR1NBQ8N0W7 255 aaPredicted RBP12.06□□□□□ -0.48
RPAIN-214ENST00000574003 TMC2Q8TDI7 906 aa12.06□□□□□ -0.48
RPAIN-214ENST00000574003 CCDC47Q96A33 483 aaKnown RBP12.06□□□□□ -0.48
RPAIN-214ENST00000574003 SPATA17Q96L03 361 aa12.06□□□□□ -0.48
RPAIN-214ENST00000574003 TWNKQ96RR1 684 aa12.06□□□□□ -0.48
RPAIN-214ENST00000574003 KCNK16Q96T55 309 aa12.06□□□□□ -0.48
RPAIN-214ENST00000574003 C8orf33Q9H7E9 229 aaPredicted RBP12.06□□□□□ -0.48
RPAIN-214ENST00000574003 VRTNQ9H8Y1 702 aa12.06□□□□□ -0.48
RPAIN-214ENST00000574003 APOBEC3GQ9HC16 384 aaKnown RBP12.06□□□□□ -0.48
RPAIN-214ENST00000574003 PRMT8Q9NR22 394 aaPredicted RBP12.06□□□□□ -0.48
RPAIN-214ENST00000574003 THG1LQ9NWX6 298 aaKnown RBP12.06□□□□□ -0.48
RPAIN-214ENST00000574003 FBXO4Q9UKT5 387 aa12.06□□□□□ -0.48
RPAIN-214ENST00000574003 ANTXRLA6NF34 631 aa12.05□□□□□ -0.48
RPAIN-214ENST00000574003 BEST1O76090 585 aa12.05□□□□□ -0.48
RPAIN-214ENST00000574003 LMNAP02545 664 aaKnown RBP12.05□□□□□ -0.48
RPAIN-214ENST00000574003 TDGF1P13385 188 aa12.05□□□□□ -0.48
RPAIN-214ENST00000574003 HDCP19113 662 aa12.05□□□□□ -0.48
RPAIN-214ENST00000574003 MAGEA9P43362 315 aa12.05□□□□□ -0.48
RPAIN-214ENST00000574003 ASPAP45381 313 aa12.05□□□□□ -0.48
RPAIN-214ENST00000574003 PLCB2Q00722 1185 aa12.05□□□□□ -0.48
RPAIN-214ENST00000574003 TAF10Q12962 218 aa12.05□□□□□ -0.48
RPAIN-214ENST00000574003 USP4Q13107 963 aa12.05□□□□□ -0.48
RPAIN-214ENST00000574003 SRSF5Q13243 272 aaKnown RBP12.05□□□□□ -0.48
RPAIN-214ENST00000574003 ADAM9Q13443 819 aa12.05□□□□□ -0.48
RPAIN-214ENST00000574003 RUNX3Q13761 415 aa12.05□□□□□ -0.48
RPAIN-214ENST00000574003 KCNB1Q14721 858 aa12.05□□□□□ -0.48
RPAIN-214ENST00000574003 MTF1Q14872 753 aa12.05□□□□□ -0.48
RPAIN-214ENST00000574003 MAPRE1Q15691 268 aaKnown RBP12.05□□□□□ -0.48
RPAIN-214ENST00000574003 ZNF77Q15935 545 aa12.05□□□□□ -0.48
RPAIN-214ENST00000574003 LPAL2Q16609 132 aa12.05□□□□□ -0.48
RPAIN-214ENST00000574003 ZCWPW2Q504Y3 356 aa12.05□□□□□ -0.48
RPAIN-214ENST00000574003 ISM2Q6H9L7 571 aa12.05□□□□□ -0.48
RPAIN-214ENST00000574003 FSTL4Q6MZW2 842 aa12.05□□□□□ -0.48
RPAIN-214ENST00000574003 FAM35AQ86V20 835 aa12.05□□□□□ -0.48
RPAIN-214ENST00000574003 RALGPS2Q86X27 583 aaPredicted RBP12.05□□□□□ -0.48
RPAIN-214ENST00000574003 FAM186BQ8IYM0 893 aa12.05□□□□□ -0.48
RPAIN-214ENST00000574003 GUF1Q8N442 669 aaKnown RBP12.05□□□□□ -0.48
RPAIN-214ENST00000574003 SUMF1Q8NBK3 374 aa12.05□□□□□ -0.48
RPAIN-214ENST00000574003 ENGASEQ8NFI3 743 aa12.05□□□□□ -0.48
RPAIN-214ENST00000574003 SCAMP5Q8TAC9 235 aa12.05□□□□□ -0.48
RPAIN-214ENST00000574003 TAS1R2Q8TE23 839 aa12.05□□□□□ -0.48
RPAIN-214ENST00000574003 SH3RF2Q8TEC5 729 aa12.05□□□□□ -0.48
RPAIN-214ENST00000574003 C8orf48Q96LL4 319 aa12.05□□□□□ -0.48
RPAIN-214ENST00000574003 MED10Q9BTT4 135 aa12.05□□□□□ -0.48
RPAIN-214ENST00000574003 RNF38Q9H0F5 515 aa12.05□□□□□ -0.48
RPAIN-214ENST00000574003 LINC00597Q9H2U6 94 aa12.05□□□□□ -0.48
RPAIN-214ENST00000574003 FAM49BQ9NUQ9 324 aa12.05□□□□□ -0.48
RPAIN-214ENST00000574003 SMPD4Q9NXE4 827 aa12.05□□□□□ -0.48
RPAIN-214ENST00000574003 FRMD4BQ9Y2L6 1034 aa12.05□□□□□ -0.48
RPAIN-214ENST00000574003 ZNF840PA6NDX5 716 aa12.04□□□□□ -0.48
RPAIN-214ENST00000574003 TRIM66O15016 1216 aa12.04□□□□□ -0.48
RPAIN-214ENST00000574003 ASS1P00966 412 aaKnown RBP12.04□□□□□ -0.48
RPAIN-214ENST00000574003 EGFP01133 1207 aa12.04□□□□□ -0.48
RPAIN-214ENST00000574003 USP17L7P0C7H9 530 aa12.04□□□□□ -0.48
RPAIN-214ENST00000574003 PRCPP42785 496 aa12.04□□□□□ -0.48
RPAIN-214ENST00000574003 PGFP49763 221 aa12.04□□□□□ -0.48
RPAIN-214ENST00000574003 NDST1P52848 882 aa12.04□□□□□ -0.48
RPAIN-214ENST00000574003 AP3M2P53677 418 aa12.04□□□□□ -0.48
RPAIN-214ENST00000574003 PMS1P54277 932 aaKnown RBP12.04□□□□□ -0.48
RPAIN-214ENST00000574003 FAM160A1Q05DH4 1040 aa12.04□□□□□ -0.48
RPAIN-214ENST00000574003 ZNF268Q14587 947 aaPredicted RBP12.04□□□□□ -0.48
RPAIN-214ENST00000574003 SGSM1Q2NKQ1 1148 aa12.04□□□□□ -0.48
RPAIN-214ENST00000574003 HEATR6Q6AI08 1181 aaKnown RBP12.04□□□□□ -0.48
RPAIN-214ENST00000574003 CC2D1AQ6P1N0 951 aaPredicted RBP12.04□□□□□ -0.48
RPAIN-214ENST00000574003 FUKQ8N0W3 1084 aa12.04□□□□□ -0.48
RPAIN-214ENST00000574003 C12orf29Q8N999 325 aa12.04□□□□□ -0.48
RPAIN-214ENST00000574003 ZMIZ2Q8NF64 920 aa12.04□□□□□ -0.48
RPAIN-214ENST00000574003 TMEM174Q8WUU8 243 aa12.04□□□□□ -0.48
RPAIN-214ENST00000574003 SEMA4DQ92854 862 aa12.04□□□□□ -0.48
RPAIN-214ENST00000574003 JAKMIP2Q96AA8 810 aa12.04□□□□□ -0.48
RPAIN-214ENST00000574003 SMOQ99835 787 aa12.04□□□□□ -0.48
RPAIN-214ENST00000574003 HINFPQ9BQA5 517 aa12.04□□□□□ -0.48
RPAIN-214ENST00000574003 TTLL2Q9BWV7 592 aa12.04□□□□□ -0.48
RPAIN-214ENST00000574003 ELOVL4Q9GZR5 314 aa12.04□□□□□ -0.48
RPAIN-214ENST00000574003 KIF9Q9HAQ2 790 aa12.04□□□□□ -0.48
RPAIN-214ENST00000574003 KRT82Q9NSB4 513 aa12.04□□□□□ -0.48
RPAIN-214ENST00000574003 ZSCAN32Q9NX65 697 aa12.04□□□□□ -0.48
RPAIN-214ENST00000574003 DUS2Q9NX74 493 aaKnown RBP12.04□□□□□ -0.48
RPAIN-214ENST00000574003 TRPM5Q9NZQ8 1165 aa12.04□□□□□ -0.48
RPAIN-214ENST00000574003 CHORDC1Q9UHD1 332 aaPredicted RBP12.04□□□□□ -0.48
RPAIN-214ENST00000574003 CEP250Q9BV73 2442 aa12.03□□□□□ -0.48
RPAIN-214ENST00000574003 HELZP42694 1942 aaKnown RBP12.03□□□□□ -0.48
RPAIN-214ENST00000574003 TRIM49BA6NDI0 452 aa12.03□□□□□ -0.48
RPAIN-214ENST00000574003 CHURC1-FNTBB4DL54 471 aa12.03□□□□□ -0.48
RPAIN-214ENST00000574003 LEFTY2O00292 366 aa12.03□□□□□ -0.48
RPAIN-214ENST00000574003 KINO60870 393 aaKnown RBP12.03□□□□□ -0.48
RPAIN-214ENST00000574003 GADD45BO75293 160 aaPredicted RBP12.03□□□□□ -0.48
RPAIN-214ENST00000574003 AP1G2O75843 785 aa12.03□□□□□ -0.48
RPAIN-214ENST00000574003 FAM163BP0C2L3 166 aa12.03□□□□□ -0.48
RPAIN-214ENST00000574003 CD58P19256 250 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms