RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 PDGFBP01127 241 aaPredicted RBP11.69□□□□□ -0.54
CHD3-216ENST00000573936 FAM200BP0CF97 657 aa11.69□□□□□ -0.54
CHD3-216ENST00000573936 VDRP11473 427 aa11.69□□□□□ -0.54
CHD3-216ENST00000573936 GPR15P49685 360 aa11.69□□□□□ -0.54
CHD3-216ENST00000573936 COPB1P53618 953 aaKnown RBP11.69□□□□□ -0.54
CHD3-216ENST00000573936 SLC8A3P57103 927 aa11.69□□□□□ -0.54
CHD3-216ENST00000573936 ORC1Q13415 861 aa11.69□□□□□ -0.54
CHD3-216ENST00000573936 MTMR3Q13615 1198 aa11.69□□□□□ -0.54
CHD3-216ENST00000573936 IQCB1Q15051 598 aa11.69□□□□□ -0.54
CHD3-216ENST00000573936 STILQ15468 1287 aa11.69□□□□□ -0.54
CHD3-216ENST00000573936 CCDC142Q17RM4 750 aa11.69□□□□□ -0.54
CHD3-216ENST00000573936 FILIP1LQ4L180 1135 aa11.69□□□□□ -0.54
CHD3-216ENST00000573936 ARHGAP15Q53QZ3 475 aa11.69□□□□□ -0.54
CHD3-216ENST00000573936 SGO2Q562F6 1265 aa11.69□□□□□ -0.54
CHD3-216ENST00000573936 PRSS36Q5K4E3 855 aa11.69□□□□□ -0.54
CHD3-216ENST00000573936 ARHGAP17Q68EM7 881 aa11.69□□□□□ -0.54
CHD3-216ENST00000573936 TMEM270Q6UE05 265 aa11.69□□□□□ -0.54
CHD3-216ENST00000573936 LRSAM1Q6UWE0 723 aa11.69□□□□□ -0.54
CHD3-216ENST00000573936 DENND5BQ6ZUT9 1274 aa11.69□□□□□ -0.54
CHD3-216ENST00000573936 PAQR9Q6ZVX9 377 aa11.69□□□□□ -0.54
CHD3-216ENST00000573936 TMC8Q8IU68 726 aa11.69□□□□□ -0.54
CHD3-216ENST00000573936 FUKQ8N0W3 1084 aa11.69□□□□□ -0.54
CHD3-216ENST00000573936 UBR7Q8N806 425 aa11.69□□□□□ -0.54
CHD3-216ENST00000573936 C12orf29Q8N999 325 aa11.69□□□□□ -0.54
CHD3-216ENST00000573936 ITFG1Q8TB96 612 aa11.69□□□□□ -0.54
CHD3-216ENST00000573936 SLC2A14Q8TDB8 520 aa11.69□□□□□ -0.54
CHD3-216ENST00000573936 TRMT2BQ96GJ1 504 aaKnown RBP11.69□□□□□ -0.54
CHD3-216ENST00000573936 LRRC3Q9BY71 257 aa11.69□□□□□ -0.54
CHD3-216ENST00000573936 ZNF518BQ9C0D4 1074 aa11.69□□□□□ -0.54
CHD3-216ENST00000573936 CSNK1G1Q9HCP0 422 aa11.69□□□□□ -0.54
CHD3-216ENST00000573936 DMAP1Q9NPF5 467 aaPredicted RBP11.69□□□□□ -0.54
CHD3-216ENST00000573936 FAM49BQ9NUQ9 324 aa11.69□□□□□ -0.54
CHD3-216ENST00000573936 COMMD8Q9NX08 183 aa11.69□□□□□ -0.54
CHD3-216ENST00000573936 EPS15L1Q9UBC2 864 aa11.69□□□□□ -0.54
CHD3-216ENST00000573936 SORCS3Q9UPU3 1222 aa11.69□□□□□ -0.54
CHD3-216ENST00000573936 FRYLO94915 3013 aa11.68□□□□□ -0.54
CHD3-216ENST00000573936 DENND4AQ7Z401 1863 aa11.68□□□□□ -0.54
CHD3-216ENST00000573936 SOBPA7XYQ1 873 aa11.68□□□□□ -0.54
CHD3-216ENST00000573936 F8VP50 259 aa11.68□□□□□ -0.54
CHD3-216ENST00000573936 RTN3O95197 1032 aaPredicted RBP11.68□□□□□ -0.54
CHD3-216ENST00000573936 LAMP2P13473 410 aa11.68□□□□□ -0.54
CHD3-216ENST00000573936 CCDC130P13994 396 aa11.68□□□□□ -0.54
CHD3-216ENST00000573936 ACO1P21399 889 aaKnown RBP11.68□□□□□ -0.54
CHD3-216ENST00000573936 RFX1P22670 979 aa11.68□□□□□ -0.54
CHD3-216ENST00000573936 DDX6P26196 483 aaKnown RBP eCLIP11.68□□□□□ -0.54
CHD3-216ENST00000573936 GABRR2P28476 465 aa11.68□□□□□ -0.54
CHD3-216ENST00000573936 ADORA2BP29275 332 aa11.68□□□□□ -0.54
CHD3-216ENST00000573936 PPP3CCP48454 512 aa11.68□□□□□ -0.54
CHD3-216ENST00000573936 PPP1R26Q5T8A7 1209 aaPredicted RBP11.68□□□□□ -0.54
CHD3-216ENST00000573936 SDHAF4Q5VUM1 108 aa11.68□□□□□ -0.54
CHD3-216ENST00000573936 MTSS1LQ765P7 747 aa11.68□□□□□ -0.54
CHD3-216ENST00000573936 NUP93Q8N1F7 819 aa11.68□□□□□ -0.54
CHD3-216ENST00000573936 RBBP8NLQ8NC74 664 aaPredicted RBP11.68□□□□□ -0.54
CHD3-216ENST00000573936 GPR152Q8TDT2 470 aa11.68□□□□□ -0.54
CHD3-216ENST00000573936 FGF13Q92913 245 aa11.68□□□□□ -0.54
CHD3-216ENST00000573936 KAT5Q92993 513 aa11.68□□□□□ -0.54
CHD3-216ENST00000573936 MYRFLQ96LU7 910 aa11.68□□□□□ -0.54
CHD3-216ENST00000573936 KREMEN1Q96MU8 473 aa11.68□□□□□ -0.54
CHD3-216ENST00000573936 MYADMQ96S97 322 aa11.68□□□□□ -0.54
CHD3-216ENST00000573936 DUSP16Q9BY84 665 aa11.68□□□□□ -0.54
CHD3-216ENST00000573936 UBXN6Q9BZV1 441 aa11.68□□□□□ -0.54
CHD3-216ENST00000573936 HSD3B7Q9H2F3 369 aa11.68□□□□□ -0.54
CHD3-216ENST00000573936 ATXN3LQ9H3M9 355 aa11.68□□□□□ -0.54
CHD3-216ENST00000573936 TSPY26PQ9H489 355 aa11.68□□□□□ -0.54
CHD3-216ENST00000573936 CBX8Q9HC52 389 aa11.68□□□□□ -0.54
CHD3-216ENST00000573936 PNPLA8Q9NP80 782 aa11.68□□□□□ -0.54
CHD3-216ENST00000573936 PLCB1Q9NQ66 1216 aa11.68□□□□□ -0.54
CHD3-216ENST00000573936 IGSF9Q9P2J2 1179 aa11.68□□□□□ -0.54
CHD3-216ENST00000573936 HESX1Q9UBX0 185 aa11.68□□□□□ -0.54
CHD3-216ENST00000573936 MAGED2Q9UNF1 606 aaPredicted RBP11.68□□□□□ -0.54
CHD3-216ENST00000573936 CNTN6Q9UQ52 1028 aa11.68□□□□□ -0.54
CHD3-216ENST00000573936 SPTBN4Q9H254 2564 aa11.68□□□□□ -0.54
CHD3-216ENST00000573936 MYO10Q9HD67 2058 aa11.67□□□□□ -0.54
CHD3-216ENST00000573936 A0A1W2PRU2 124 aa11.67□□□□□ -0.54
CHD3-216ENST00000573936 LGALS16A8MUM7 142 aa11.67□□□□□ -0.54
CHD3-216ENST00000573936 PROB1E7EW31 1015 aa11.67□□□□□ -0.54
CHD3-216ENST00000573936 MED7O43513 233 aa11.67□□□□□ -0.54
CHD3-216ENST00000573936 F11P03951 625 aa11.67□□□□□ -0.54
CHD3-216ENST00000573936 ASGR2P07307 311 aa11.67□□□□□ -0.54
CHD3-216ENST00000573936 KRT5P13647 590 aa11.67□□□□□ -0.54
CHD3-216ENST00000573936 CD19P15391 556 aa11.67□□□□□ -0.54
CHD3-216ENST00000573936 HMGA1P17096 107 aaKnown RBP11.67□□□□□ -0.54
CHD3-216ENST00000573936 CEBPBP17676 345 aa11.67□□□□□ -0.54
CHD3-216ENST00000573936 MAP3K7CLP57077 242 aa11.67□□□□□ -0.54
CHD3-216ENST00000573936 UBXN1Q04323 297 aa11.67□□□□□ -0.54
CHD3-216ENST00000573936 KCNMA1Q12791 1236 aa11.67□□□□□ -0.54
CHD3-216ENST00000573936 ARHGAP44Q17R89 818 aa11.67□□□□□ -0.54
CHD3-216ENST00000573936 SLC5A9Q2M3M2 681 aa11.67□□□□□ -0.54
CHD3-216ENST00000573936 KLHDC7AQ5VTJ3 777 aa11.67□□□□□ -0.54
CHD3-216ENST00000573936 NPAS3Q8IXF0 933 aa11.67□□□□□ -0.54
CHD3-216ENST00000573936 ANKRD52Q8NB46 1076 aa11.67□□□□□ -0.54
CHD3-216ENST00000573936 MRPS31Q92665 395 aaKnown RBP11.67□□□□□ -0.54
CHD3-216ENST00000573936 TCEAL4Q96EI5 215 aa11.67□□□□□ -0.54
CHD3-216ENST00000573936 MCRS1Q96EZ8 462 aa11.67□□□□□ -0.54
CHD3-216ENST00000573936 SMOQ99835 787 aa11.67□□□□□ -0.54
CHD3-216ENST00000573936 ANP32EQ9BTT0 268 aa11.67□□□□□ -0.54
CHD3-216ENST00000573936 TTLL2Q9BWV7 592 aa11.67□□□□□ -0.54
CHD3-216ENST00000573936 LSM14BQ9BX40 385 aaKnown RBP11.67□□□□□ -0.54
CHD3-216ENST00000573936 SMOC2Q9H3U7 446 aa11.67□□□□□ -0.54
CHD3-216ENST00000573936 FBXO44Q9H4M3 255 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms