RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 CCINQ13939 588 aa18.57■□□□□ 0.56
SMG6-214ENST00000573827 TRIM68Q6AZZ1 485 aa18.57■□□□□ 0.56
SMG6-214ENST00000573827 C1orf228Q6PIY5 440 aa18.57■□□□□ 0.56
SMG6-214ENST00000573827 DENND5BQ6ZUT9 1274 aa18.57■□□□□ 0.56
SMG6-214ENST00000573827 SMYD4Q8IYR2 804 aaPredicted RBP18.57■□□□□ 0.56
SMG6-214ENST00000573827 SUMF1Q8NBK3 374 aa18.57■□□□□ 0.56
SMG6-214ENST00000573827 RBM12Q9NTZ6 932 aaKnown RBP18.57■□□□□ 0.56
SMG6-214ENST00000573827 HMGXB4Q9UGU5 601 aa18.57■□□□□ 0.56
SMG6-214ENST00000573827 ZNF840PA6NDX5 716 aa18.56■□□□□ 0.56
SMG6-214ENST00000573827 A8MXQ7 604 aa18.56■□□□□ 0.56
SMG6-214ENST00000573827 CLDN5O00501 218 aa18.56■□□□□ 0.56
SMG6-214ENST00000573827 LILRB5O75023 590 aa18.56■□□□□ 0.56
SMG6-214ENST00000573827 PHACTR2O75167 634 aa18.56■□□□□ 0.56
SMG6-214ENST00000573827 OLFM2O95897 454 aa18.56■□□□□ 0.56
SMG6-214ENST00000573827 TCF3P15923 654 aa18.56■□□□□ 0.56
SMG6-214ENST00000573827 GRIK1P39086 918 aa18.56■□□□□ 0.56
SMG6-214ENST00000573827 CSTF1Q05048 431 aaKnown RBP18.56■□□□□ 0.56
SMG6-214ENST00000573827 FAM160A1Q05DH4 1040 aa18.56■□□□□ 0.56
SMG6-214ENST00000573827 PNOCQ13519 176 aa18.56■□□□□ 0.56
SMG6-214ENST00000573827 BECN1Q14457 450 aa18.56■□□□□ 0.56
SMG6-214ENST00000573827 ITPRIPL2Q3MIP1 535 aa18.56■□□□□ 0.56
SMG6-214ENST00000573827 ZNF667Q5HYK9 610 aa18.56■□□□□ 0.56
SMG6-214ENST00000573827 CEP135Q66GS9 1140 aa18.56■□□□□ 0.56
SMG6-214ENST00000573827 SPOPLQ6IQ16 392 aa18.56■□□□□ 0.56
SMG6-214ENST00000573827 TSSK4Q6SA08 328 aa18.56■□□□□ 0.56
SMG6-214ENST00000573827 IER2Q9BTL4 223 aa18.56■□□□□ 0.56
SMG6-214ENST00000573827 ELOVL4Q9GZR5 314 aa18.56■□□□□ 0.56
SMG6-214ENST00000573827 APOBEC3GQ9HC16 384 aaKnown RBP18.56■□□□□ 0.56
SMG6-214ENST00000573827 C2orf42Q9NWW7 574 aa18.56■□□□□ 0.56
SMG6-214ENST00000573827 TNFRSF10BO14763 440 aa18.55■□□□□ 0.56
SMG6-214ENST00000573827 TRIM66O15016 1216 aa18.55■□□□□ 0.56
SMG6-214ENST00000573827 HLA-DRAP01903 254 aa18.55■□□□□ 0.56
SMG6-214ENST00000573827 TRIM49P0CI25 452 aa18.55■□□□□ 0.56
SMG6-214ENST00000573827 TRIM49CP0CI26 452 aa18.55■□□□□ 0.56
SMG6-214ENST00000573827 ARSAP15289 507 aa18.55■□□□□ 0.56
SMG6-214ENST00000573827 VAMP7P51809 220 aa18.55■□□□□ 0.56
SMG6-214ENST00000573827 KPNA1P52294 538 aaPredicted RBP18.55■□□□□ 0.56
SMG6-214ENST00000573827 NUCB2P80303 420 aa18.55■□□□□ 0.56
SMG6-214ENST00000573827 SGSM1Q2NKQ1 1148 aa18.55■□□□□ 0.56
SMG6-214ENST00000573827 SCARA5Q6ZMJ2 495 aa18.55■□□□□ 0.56
SMG6-214ENST00000573827 Q6ZS52 159 aa18.55■□□□□ 0.56
SMG6-214ENST00000573827 FUKQ8N0W3 1084 aa18.55■□□□□ 0.56
SMG6-214ENST00000573827 ARL14EPQ8N8R7 260 aaPredicted RBP18.55■□□□□ 0.56
SMG6-214ENST00000573827 TAS1R2Q8TE23 839 aa18.55■□□□□ 0.56
SMG6-214ENST00000573827 TAF4BQ92750 862 aa18.55■□□□□ 0.56
SMG6-214ENST00000573827 EBF3Q9H4W6 596 aa18.55■□□□□ 0.56
SMG6-214ENST00000573827 IL37Q9NZH6 218 aa18.55■□□□□ 0.56
SMG6-214ENST00000573827 ARHGAP26Q9UNA1 814 aa18.55■□□□□ 0.56
SMG6-214ENST00000573827 FRMD4BQ9Y2L6 1034 aa18.55■□□□□ 0.56
SMG6-214ENST00000573827 PCDHGA2Q9Y5H1 932 aa18.55■□□□□ 0.56
SMG6-214ENST00000573827 TRAV19A0A0A6YYK7 116 aa18.54■□□□□ 0.56
SMG6-214ENST00000573827 KIF20AO95235 890 aa18.54■□□□□ 0.56
SMG6-214ENST00000573827 PAPSS2O95340 614 aaPredicted RBP18.54■□□□□ 0.56
SMG6-214ENST00000573827 LMNAP02545 664 aaKnown RBP18.54■□□□□ 0.56
SMG6-214ENST00000573827 RUNX3Q13761 415 aa18.54■□□□□ 0.56
SMG6-214ENST00000573827 MTF1Q14872 753 aa18.54■□□□□ 0.56
SMG6-214ENST00000573827 EDRF1Q3B7T1 1238 aa18.54■□□□□ 0.56
SMG6-214ENST00000573827 COBLL1Q53SF7 1204 aa18.54■□□□□ 0.56
SMG6-214ENST00000573827 INTS8Q75QN2 995 aaKnown RBP18.54■□□□□ 0.56
SMG6-214ENST00000573827 FAM35AQ86V20 835 aa18.54■□□□□ 0.56
SMG6-214ENST00000573827 ZC3H3Q8IXZ2 948 aaKnown RBP18.54■□□□□ 0.56
SMG6-214ENST00000573827 ADSSL1Q8N142 457 aa18.54■□□□□ 0.56
SMG6-214ENST00000573827 CRYBG2Q8N1P7 616 aa18.54■□□□□ 0.56
SMG6-214ENST00000573827 ZMIZ2Q8NF64 920 aa18.54■□□□□ 0.56
SMG6-214ENST00000573827 CCDC47Q96A33 483 aaKnown RBP18.54■□□□□ 0.56
SMG6-214ENST00000573827 KCNK16Q96T55 309 aa18.54■□□□□ 0.56
SMG6-214ENST00000573827 RNF38Q9H0F5 515 aa18.54■□□□□ 0.56
SMG6-214ENST00000573827 TRPC7Q9HCX4 862 aa18.54■□□□□ 0.56
SMG6-214ENST00000573827 THG1LQ9NWX6 298 aaKnown RBP18.54■□□□□ 0.56
SMG6-214ENST00000573827 ZSCAN32Q9NX65 697 aa18.54■□□□□ 0.56
SMG6-214ENST00000573827 FAM92AA1XBS5 289 aa18.53■□□□□ 0.56
SMG6-214ENST00000573827 OAS1P00973 400 aaKnown RBP18.53■□□□□ 0.56
SMG6-214ENST00000573827 USP17L7P0C7H9 530 aa18.53■□□□□ 0.56
SMG6-214ENST00000573827 PFKLP17858 780 aa18.53■□□□□ 0.56
SMG6-214ENST00000573827 GCLMP48507 274 aa18.53■□□□□ 0.56
SMG6-214ENST00000573827 SATB1Q01826 763 aa18.53■□□□□ 0.56
SMG6-214ENST00000573827 INCA1Q0VD86 236 aa18.53■□□□□ 0.56
SMG6-214ENST00000573827 TAF10Q12962 218 aa18.53■□□□□ 0.56
SMG6-214ENST00000573827 ADAM9Q13443 819 aa18.53■□□□□ 0.56
SMG6-214ENST00000573827 PON2Q15165 354 aa18.53■□□□□ 0.56
SMG6-214ENST00000573827 TMEM196Q5HYL7 178 aa18.53■□□□□ 0.56
SMG6-214ENST00000573827 NAIF1Q69YI7 327 aaPredicted RBP18.53■□□□□ 0.56
SMG6-214ENST00000573827 FSTL4Q6MZW2 842 aa18.53■□□□□ 0.56
SMG6-214ENST00000573827 ZC3H14Q6PJT7 736 aaKnown RBP18.53■□□□□ 0.56
SMG6-214ENST00000573827 FAM186BQ8IYM0 893 aa18.53■□□□□ 0.56
SMG6-214ENST00000573827 SPEM1Q8N4L4 309 aa18.53■□□□□ 0.56
SMG6-214ENST00000573827 TWNKQ96RR1 684 aa18.53■□□□□ 0.56
SMG6-214ENST00000573827 FBRSL1Q9HCM7 1045 aaKnown RBP18.53■□□□□ 0.56
SMG6-214ENST00000573827 HELZP42694 1942 aaKnown RBP18.53■□□□□ 0.56
SMG6-214ENST00000573827 NCOR2Q9Y618 2525 aa18.52■□□□□ 0.56
SMG6-214ENST00000573827 K7ESF4 209 aa18.52■□□□□ 0.56
SMG6-214ENST00000573827 TRDMT1O14717 391 aaKnown RBP18.52■□□□□ 0.56
SMG6-214ENST00000573827 CKMP06732 381 aa18.52■□□□□ 0.56
SMG6-214ENST00000573827 HDCP19113 662 aa18.52■□□□□ 0.56
SMG6-214ENST00000573827 ANXA13P27216 316 aa18.52■□□□□ 0.56
SMG6-214ENST00000573827 HOXC13P31276 330 aa18.52■□□□□ 0.56
SMG6-214ENST00000573827 PSMC2P35998 433 aaKnown RBP18.52■□□□□ 0.56
SMG6-214ENST00000573827 PRCPP42785 496 aa18.52■□□□□ 0.56
SMG6-214ENST00000573827 NDST1P52848 882 aa18.52■□□□□ 0.56
SMG6-214ENST00000573827 PMS1P54277 932 aaKnown RBP18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms