RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 PDGFRLQ15198 375 aa10.28□□□□□ -0.76
NPLOC4-212ENST00000573328 KRBA2Q6ZNG9 492 aa10.28□□□□□ -0.76
NPLOC4-212ENST00000573328 Q6ZS52 159 aa10.28□□□□□ -0.76
NPLOC4-212ENST00000573328 SLC9A9Q8IVB4 645 aa10.28□□□□□ -0.76
NPLOC4-212ENST00000573328 ZNF687Q8N1G0 1237 aa10.28□□□□□ -0.76
NPLOC4-212ENST00000573328 SPEM1Q8N4L4 309 aa10.28□□□□□ -0.76
NPLOC4-212ENST00000573328 CPA6Q8N4T0 437 aa10.28□□□□□ -0.76
NPLOC4-212ENST00000573328 ARL14EPQ8N8R7 260 aaPredicted RBP10.28□□□□□ -0.76
NPLOC4-212ENST00000573328 PLEKHO2Q8TD55 490 aa10.28□□□□□ -0.76
NPLOC4-212ENST00000573328 EXOC4Q96A65 974 aa10.28□□□□□ -0.76
NPLOC4-212ENST00000573328 ELMO3Q96BJ8 720 aa10.28□□□□□ -0.76
NPLOC4-212ENST00000573328 TNIP3Q96KP6 325 aa10.28□□□□□ -0.76
NPLOC4-212ENST00000573328 SPATA17Q96L03 361 aa10.28□□□□□ -0.76
NPLOC4-212ENST00000573328 SLITRK1Q96PX8 696 aa10.28□□□□□ -0.76
NPLOC4-212ENST00000573328 SLC22A12Q96S37 553 aa10.28□□□□□ -0.76
NPLOC4-212ENST00000573328 CYP2S1Q96SQ9 504 aa10.28□□□□□ -0.76
NPLOC4-212ENST00000573328 IMPG2Q9BZV3 1241 aa10.28□□□□□ -0.76
NPLOC4-212ENST00000573328 ZNF518BQ9C0D4 1074 aa10.28□□□□□ -0.76
NPLOC4-212ENST00000573328 GZF1Q9H116 711 aaPredicted RBP10.28□□□□□ -0.76
NPLOC4-212ENST00000573328 KCTD10Q9H3F6 313 aa10.28□□□□□ -0.76
NPLOC4-212ENST00000573328 MMRN2Q9H8L6 949 aa10.28□□□□□ -0.76
NPLOC4-212ENST00000573328 HPS4Q9NQG7 708 aa10.28□□□□□ -0.76
NPLOC4-212ENST00000573328 DUS2Q9NX74 493 aaKnown RBP10.28□□□□□ -0.76
NPLOC4-212ENST00000573328 SMG5Q9UPR3 1016 aaKnown RBP10.28□□□□□ -0.76
NPLOC4-212ENST00000573328 MAPK8IP1Q9UQF2 711 aa10.28□□□□□ -0.76
NPLOC4-212ENST00000573328 OTOGLQ3ZCN5 2332 aa10.27□□□□□ -0.77
NPLOC4-212ENST00000573328 A0A1W2PQ27 194 aa10.27□□□□□ -0.77
NPLOC4-212ENST00000573328 A0A1W2PQ64 194 aa10.27□□□□□ -0.77
NPLOC4-212ENST00000573328 A0A1W2PQD8 194 aa10.27□□□□□ -0.77
NPLOC4-212ENST00000573328 GOLGA6L4A6NEF3 574 aa10.27□□□□□ -0.77
NPLOC4-212ENST00000573328 RHOBTB3O94955 611 aa10.27□□□□□ -0.77
NPLOC4-212ENST00000573328 ZNF202O95125 648 aa10.27□□□□□ -0.77
NPLOC4-212ENST00000573328 KRT13P13646 458 aa10.27□□□□□ -0.77
NPLOC4-212ENST00000573328 HDCP19113 662 aa10.27□□□□□ -0.77
NPLOC4-212ENST00000573328 NR2F2P24468 414 aa10.27□□□□□ -0.77
NPLOC4-212ENST00000573328 USP46P62068 366 aa10.27□□□□□ -0.77
NPLOC4-212ENST00000573328 DLG4P78352 724 aa10.27□□□□□ -0.77
NPLOC4-212ENST00000573328 GRSF1Q12849 480 aaKnown RBP eCLIP10.27□□□□□ -0.77
NPLOC4-212ENST00000573328 USP4Q13107 963 aa10.27□□□□□ -0.77
NPLOC4-212ENST00000573328 GAS6Q14393 721 aa10.27□□□□□ -0.77
NPLOC4-212ENST00000573328 ZNF77Q15935 545 aa10.27□□□□□ -0.77
NPLOC4-212ENST00000573328 HEATR6Q6AI08 1181 aaKnown RBP10.27□□□□□ -0.77
NPLOC4-212ENST00000573328 PRR23BQ6ZRT6 265 aa10.27□□□□□ -0.77
NPLOC4-212ENST00000573328 DCLK2Q8N568 766 aa10.27□□□□□ -0.77
NPLOC4-212ENST00000573328 ZBTB44Q8NCP5 570 aa10.27□□□□□ -0.77
NPLOC4-212ENST00000573328 RIN3Q8TB24 985 aa10.27□□□□□ -0.77
NPLOC4-212ENST00000573328 SH3RF2Q8TEC5 729 aa10.27□□□□□ -0.77
NPLOC4-212ENST00000573328 ATP2A3Q93084 1043 aa10.27□□□□□ -0.77
NPLOC4-212ENST00000573328 C8orf48Q96LL4 319 aa10.27□□□□□ -0.77
NPLOC4-212ENST00000573328 CEP295NLQ96MC4 621 aa10.27□□□□□ -0.77
NPLOC4-212ENST00000573328 FAM83CQ9BQN1 747 aa10.27□□□□□ -0.77
NPLOC4-212ENST00000573328 XYLT2Q9H1B5 865 aa10.27□□□□□ -0.77
NPLOC4-212ENST00000573328 GOLPH3LQ9H4A5 285 aa10.27□□□□□ -0.77
NPLOC4-212ENST00000573328 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.27□□□□□ -0.77
NPLOC4-212ENST00000573328 DMAC2Q9NW81 257 aa10.27□□□□□ -0.77
NPLOC4-212ENST00000573328 GMEB2Q9UKD1 530 aa10.27□□□□□ -0.77
NPLOC4-212ENST00000573328 NME7Q9Y5B8 376 aa10.27□□□□□ -0.77
NPLOC4-212ENST00000573328 WNT6Q9Y6F9 365 aa10.27□□□□□ -0.77
NPLOC4-212ENST00000573328 VNN1O95497 513 aa10.26□□□□□ -0.77
NPLOC4-212ENST00000573328 HLA-DRAP01903 254 aa10.26□□□□□ -0.77
NPLOC4-212ENST00000573328 C4BPAP04003 597 aaKnown RBP10.26□□□□□ -0.77
NPLOC4-212ENST00000573328 FAM163BP0C2L3 166 aa10.26□□□□□ -0.77
NPLOC4-212ENST00000573328 TRIM49P0CI25 452 aa10.26□□□□□ -0.77
NPLOC4-212ENST00000573328 TRIM49CP0CI26 452 aa10.26□□□□□ -0.77
NPLOC4-212ENST00000573328 RPL13P26373 211 aaKnown RBP10.26□□□□□ -0.77
NPLOC4-212ENST00000573328 ID4P47928 161 aa10.26□□□□□ -0.77
NPLOC4-212ENST00000573328 VAMP7P51809 220 aa10.26□□□□□ -0.77
NPLOC4-212ENST00000573328 CACNA2D1P54289 1103 aa10.26□□□□□ -0.77
NPLOC4-212ENST00000573328 NOP14P78316 857 aaKnown RBP10.26□□□□□ -0.77
NPLOC4-212ENST00000573328 DPYDQ12882 1025 aa10.26□□□□□ -0.77
NPLOC4-212ENST00000573328 NR1H3Q13133 447 aa10.26□□□□□ -0.77
NPLOC4-212ENST00000573328 CCINQ13939 588 aa10.26□□□□□ -0.77
NPLOC4-212ENST00000573328 LPAL2Q16609 132 aa10.26□□□□□ -0.77
NPLOC4-212ENST00000573328 SGSM1Q2NKQ1 1148 aa10.26□□□□□ -0.77
NPLOC4-212ENST00000573328 WDR44Q5JSH3 913 aa10.26□□□□□ -0.77
NPLOC4-212ENST00000573328 INTS8Q75QN2 995 aaKnown RBP10.26□□□□□ -0.77
NPLOC4-212ENST00000573328 ACOT1Q86TX2 421 aa10.26□□□□□ -0.77
NPLOC4-212ENST00000573328 FAM35AQ86V20 835 aa10.26□□□□□ -0.77
NPLOC4-212ENST00000573328 FAM186BQ8IYM0 893 aa10.26□□□□□ -0.77
NPLOC4-212ENST00000573328 SYNPOQ8N3V7 929 aa10.26□□□□□ -0.77
NPLOC4-212ENST00000573328 SUMF1Q8NBK3 374 aa10.26□□□□□ -0.77
NPLOC4-212ENST00000573328 CCDC150Q8NCX0 1101 aa10.26□□□□□ -0.77
NPLOC4-212ENST00000573328 TMC2Q8TDI7 906 aa10.26□□□□□ -0.77
NPLOC4-212ENST00000573328 OSCP1Q8WVF1 389 aa10.26□□□□□ -0.77
NPLOC4-212ENST00000573328 FBXO32Q969P5 355 aa10.26□□□□□ -0.77
NPLOC4-212ENST00000573328 SMARCD1Q96GM5 515 aa10.26□□□□□ -0.77
NPLOC4-212ENST00000573328 B3GNT5Q9BYG0 378 aa10.26□□□□□ -0.77
NPLOC4-212ENST00000573328 EPC1Q9H2F5 836 aa10.26□□□□□ -0.77
NPLOC4-212ENST00000573328 ECT2Q9H8V3 914 aa10.26□□□□□ -0.77
NPLOC4-212ENST00000573328 VRTNQ9H8Y1 702 aa10.26□□□□□ -0.77
NPLOC4-212ENST00000573328 DMAP1Q9NPF5 467 aaPredicted RBP10.26□□□□□ -0.77
NPLOC4-212ENST00000573328 KRT82Q9NSB4 513 aa10.26□□□□□ -0.77
NPLOC4-212ENST00000573328 TRAF3IP3Q9Y228 551 aa10.26□□□□□ -0.77
NPLOC4-212ENST00000573328 FAM237AA0A1B0GTK4 181 aa10.25□□□□□ -0.77
NPLOC4-212ENST00000573328 OTOL1A6NHN0 477 aaPredicted RBP10.25□□□□□ -0.77
NPLOC4-212ENST00000573328 CHURC1-FNTBB4DL54 471 aa10.25□□□□□ -0.77
NPLOC4-212ENST00000573328 LILRB5O75023 590 aa10.25□□□□□ -0.77
NPLOC4-212ENST00000573328 RNF40O75150 1001 aa10.25□□□□□ -0.77
NPLOC4-212ENST00000573328 AP1G2O75843 785 aa10.25□□□□□ -0.77
NPLOC4-212ENST00000573328 RTN3O95197 1032 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms