RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 ADH1AP07327 375 aa10.58□□□□□ -0.72
SMG6-213ENST00000573166 KRT10P13645 584 aa10.58□□□□□ -0.72
SMG6-213ENST00000573166 KRT15P19012 456 aa10.58□□□□□ -0.72
SMG6-213ENST00000573166 YWHAZP63104 245 aaKnown RBP10.58□□□□□ -0.72
SMG6-213ENST00000573166 MTMR3Q13615 1198 aa10.58□□□□□ -0.72
SMG6-213ENST00000573166 FAM187BQ17R55 369 aa10.58□□□□□ -0.72
SMG6-213ENST00000573166 CDCA2Q69YH5 1023 aaPredicted RBP10.58□□□□□ -0.72
SMG6-213ENST00000573166 NUDT18Q6ZVK8 323 aa10.58□□□□□ -0.72
SMG6-213ENST00000573166 EFCAB13Q8IY85 973 aa10.58□□□□□ -0.72
SMG6-213ENST00000573166 TOP6BLQ8N6T0 577 aa10.58□□□□□ -0.72
SMG6-213ENST00000573166 FAM172AQ8WUF8 416 aa10.58□□□□□ -0.72
SMG6-213ENST00000573166 ACSF2Q96CM8 615 aaPredicted RBP10.58□□□□□ -0.72
SMG6-213ENST00000573166 CNPY3Q9BT09 278 aa10.58□□□□□ -0.72
SMG6-213ENST00000573166 NFKBIZQ9BYH8 718 aa10.58□□□□□ -0.72
SMG6-213ENST00000573166 TLR8Q9NR97 1041 aaKnown RBP10.58□□□□□ -0.72
SMG6-213ENST00000573166 ADAM28Q9UKQ2 775 aa10.58□□□□□ -0.72
SMG6-213ENST00000573166 E5RJQ4 531 aa10.58□□□□□ -0.72
SMG6-213ENST00000573166 F8VP50 259 aa10.58□□□□□ -0.72
SMG6-213ENST00000573166 PHBP35232 272 aa10.58□□□□□ -0.72
SMG6-213ENST00000573166 SLC11A2P49281 568 aa10.58□□□□□ -0.72
SMG6-213ENST00000573166 LILRA4P59901 499 aa10.58□□□□□ -0.72
SMG6-213ENST00000573166 KRT71Q3SY84 523 aa10.58□□□□□ -0.72
SMG6-213ENST00000573166 BBS9Q3SYG4 887 aa10.58□□□□□ -0.72
SMG6-213ENST00000573166 RPRD1AQ96P16 312 aaPredicted RBP10.58□□□□□ -0.72
SMG6-213ENST00000573166 MRPL45Q9BRJ2 306 aaKnown RBP10.58□□□□□ -0.72
SMG6-213ENST00000573166 ATXN3LQ9H3M9 355 aa10.58□□□□□ -0.72
SMG6-213ENST00000573166 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.58□□□□□ -0.72
SMG6-213ENST00000573166 SMPD4Q9NXE4 827 aa10.58□□□□□ -0.72
SMG6-213ENST00000573166 TTC7AQ9ULT0 858 aaPredicted RBP10.58□□□□□ -0.72
SMG6-213ENST00000573166 SNX12Q9UMY4 172 aa10.58□□□□□ -0.72
SMG6-213ENST00000573166 DDX60LQ5H9U9 1706 aaKnown RBP10.58□□□□□ -0.72
SMG6-213ENST00000573166 SSC5DA1L4H1 1573 aa10.58□□□□□ -0.72
SMG6-213ENST00000573166 DOCK2Q92608 1830 aa10.58□□□□□ -0.72
SMG6-213ENST00000573166 LPIN1Q14693 890 aa10.58□□□□□ -0.72
SMG6-213ENST00000573166 KCNT1Q5JUK3 1230 aa10.58□□□□□ -0.72
SMG6-213ENST00000573166 DENND1BQ6P3S1 775 aa10.58□□□□□ -0.72
SMG6-213ENST00000573166 CNKSR3Q6P9H4 555 aa10.58□□□□□ -0.72
SMG6-213ENST00000573166 B3GNT9Q6UX72 402 aa10.58□□□□□ -0.72
SMG6-213ENST00000573166 NYAP1Q6ZVC0 841 aa10.58□□□□□ -0.72
SMG6-213ENST00000573166 TAOK1Q7L7X3 1001 aa10.58□□□□□ -0.72
SMG6-213ENST00000573166 ATP6V0D2Q8N8Y2 350 aa10.58□□□□□ -0.72
SMG6-213ENST00000573166 TPCN2Q8NHX9 752 aa10.58□□□□□ -0.72
SMG6-213ENST00000573166 FAF2Q96CS3 445 aa10.58□□□□□ -0.72
SMG6-213ENST00000573166 OSBPL8Q9BZF1 889 aa10.58□□□□□ -0.72
SMG6-213ENST00000573166 ULBP1Q9BZM6 244 aa10.58□□□□□ -0.72
SMG6-213ENST00000573166 CERS4Q9HA82 394 aa10.58□□□□□ -0.72
SMG6-213ENST00000573166 SLC27A5Q9Y2P5 690 aa10.58□□□□□ -0.72
SMG6-213ENST00000573166 ABHD14A-ACY1A0A1B0GW23 586 aa10.57□□□□□ -0.72
SMG6-213ENST00000573166 FAM155AB1AL88 458 aaPredicted RBP10.57□□□□□ -0.72
SMG6-213ENST00000573166 F5H423 210 aaPredicted RBP10.57□□□□□ -0.72
SMG6-213ENST00000573166 XYLBO75191 536 aa10.57□□□□□ -0.72
SMG6-213ENST00000573166 NPR3P17342 541 aa10.57□□□□□ -0.72
SMG6-213ENST00000573166 TBX2Q13207 712 aaPredicted RBP10.57□□□□□ -0.72
SMG6-213ENST00000573166 SEPT6Q14141 434 aa10.57□□□□□ -0.72
SMG6-213ENST00000573166 DENND5BQ6ZUT9 1274 aa10.57□□□□□ -0.72
SMG6-213ENST00000573166 TTC30AQ86WT1 665 aa10.57□□□□□ -0.72
SMG6-213ENST00000573166 PDIK1LQ8N165 341 aa10.57□□□□□ -0.72
SMG6-213ENST00000573166 KLC2Q9H0B6 622 aa10.57□□□□□ -0.72
SMG6-213ENST00000573166 FBXL5Q9UKA1 691 aa10.57□□□□□ -0.72
SMG6-213ENST00000573166 CEP290O15078 2479 aa10.57□□□□□ -0.72
SMG6-213ENST00000573166 USP17L7P0C7H9 530 aa10.57□□□□□ -0.72
SMG6-213ENST00000573166 CTNNA1P35221 906 aaKnown RBP10.57□□□□□ -0.72
SMG6-213ENST00000573166 PBX3P40426 434 aa10.57□□□□□ -0.72
SMG6-213ENST00000573166 GLUD2P49448 558 aa10.57□□□□□ -0.72
SMG6-213ENST00000573166 HNRNPH2P55795 449 aaKnown RBP10.57□□□□□ -0.72
SMG6-213ENST00000573166 EIF3EP60228 445 aaKnown RBP10.57□□□□□ -0.72
SMG6-213ENST00000573166 ROR1Q01973 937 aa10.57□□□□□ -0.72
SMG6-213ENST00000573166 BIRC2Q13490 618 aa10.57□□□□□ -0.72
SMG6-213ENST00000573166 ZNF268Q14587 947 aaPredicted RBP10.57□□□□□ -0.72
SMG6-213ENST00000573166 ZNF235Q14590 738 aa10.57□□□□□ -0.72
SMG6-213ENST00000573166 FUT10Q6P4F1 479 aa10.57□□□□□ -0.72
SMG6-213ENST00000573166 SLC39A5Q6ZMH5 540 aa10.57□□□□□ -0.72
SMG6-213ENST00000573166 PID1Q7Z2X4 250 aa10.57□□□□□ -0.72
SMG6-213ENST00000573166 PIGZQ86VD9 579 aa10.57□□□□□ -0.72
SMG6-213ENST00000573166 MYLPFQ96A32 169 aa10.57□□□□□ -0.72
SMG6-213ENST00000573166 TBC1D31Q96DN5 1066 aa10.57□□□□□ -0.72
SMG6-213ENST00000573166 AGO3Q9H9G7 860 aaKnown RBP10.57□□□□□ -0.72
SMG6-213ENST00000573166 NUDT5Q9UKK9 219 aa10.57□□□□□ -0.72
SMG6-213ENST00000573166 SNX24Q9Y343 169 aa10.57□□□□□ -0.72
SMG6-213ENST00000573166 CLDN5O00501 218 aa10.57□□□□□ -0.72
SMG6-213ENST00000573166 PPP1R12AO14974 1030 aaPredicted RBP10.57□□□□□ -0.72
SMG6-213ENST00000573166 CST8O60676 142 aa10.57□□□□□ -0.72
SMG6-213ENST00000573166 RTN3O95197 1032 aaPredicted RBP10.57□□□□□ -0.72
SMG6-213ENST00000573166 CPP00450 1065 aa10.57□□□□□ -0.72
SMG6-213ENST00000573166 CSF2RAP15509 400 aa10.57□□□□□ -0.72
SMG6-213ENST00000573166 PLPP4Q5VZY2 271 aa10.57□□□□□ -0.72
SMG6-213ENST00000573166 IL31Q6EBC2 164 aa10.57□□□□□ -0.72
SMG6-213ENST00000573166 RBM23Q86U06 439 aaKnown RBP10.57□□□□□ -0.72
SMG6-213ENST00000573166 VPS52Q8N1B4 723 aa10.57□□□□□ -0.72
SMG6-213ENST00000573166 PABPC5Q96DU9 382 aaKnown RBP10.57□□□□□ -0.72
SMG6-213ENST00000573166 CCDC68Q9H2F9 335 aa10.57□□□□□ -0.72
SMG6-213ENST00000573166 FARP1Q9Y4F1 1045 aaPredicted RBP10.57□□□□□ -0.72
SMG6-213ENST00000573166 CDY1Q9Y6F8 540 aa10.57□□□□□ -0.72
SMG6-213ENST00000573166 OR6C75A6NL08 312 aa10.57□□□□□ -0.72
SMG6-213ENST00000573166 PPP1R37O75864 691 aa10.57□□□□□ -0.72
SMG6-213ENST00000573166 MX2P20592 715 aa10.57□□□□□ -0.72
SMG6-213ENST00000573166 CYP3A5P20815 502 aa10.57□□□□□ -0.72
SMG6-213ENST00000573166 PDCLQ13371 301 aa10.57□□□□□ -0.72
SMG6-213ENST00000573166 CCDC149Q6ZUS6 474 aa10.57□□□□□ -0.72
SMG6-213ENST00000573166 CDKL3Q8IVW4 592 aaPredicted RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms