RNA–Protein interactions for RNA: ENST00000571739.5

TRAPPC1-203, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-203ENST00000571739 SCAMP5Q8TAC9 235 aa9.22□□□□□ -0.93
TRAPPC1-203ENST00000571739 TFAP2BQ92481 460 aa9.22□□□□□ -0.93
TRAPPC1-203ENST00000571739 EDAQ92838 391 aa9.22□□□□□ -0.93
TRAPPC1-203ENST00000571739 NXPE3Q969Y0 559 aa9.22□□□□□ -0.93
TRAPPC1-203ENST00000571739 RSPRY1Q96DX4 576 aa9.22□□□□□ -0.93
TRAPPC1-203ENST00000571739 TRMT2BQ96GJ1 504 aaKnown RBP9.22□□□□□ -0.93
TRAPPC1-203ENST00000571739 CEP295NLQ96MC4 621 aa9.22□□□□□ -0.93
TRAPPC1-203ENST00000571739 ASB16Q96NS5 453 aa9.22□□□□□ -0.93
TRAPPC1-203ENST00000571739 LRRC3BQ96PB8 259 aa9.22□□□□□ -0.93
TRAPPC1-203ENST00000571739 CYP2S1Q96SQ9 504 aa9.22□□□□□ -0.93
TRAPPC1-203ENST00000571739 BPIFA3Q9BQP9 254 aa9.22□□□□□ -0.93
TRAPPC1-203ENST00000571739 TTLL2Q9BWV7 592 aa9.22□□□□□ -0.93
TRAPPC1-203ENST00000571739 DUSP16Q9BY84 665 aa9.22□□□□□ -0.93
TRAPPC1-203ENST00000571739 VPS16Q9H269 839 aa9.22□□□□□ -0.93
TRAPPC1-203ENST00000571739 TASP1Q9H6P5 420 aa9.22□□□□□ -0.93
TRAPPC1-203ENST00000571739 C11orf16Q9NQ32 467 aa9.22□□□□□ -0.93
TRAPPC1-203ENST00000571739 GCNT4Q9P109 453 aa9.22□□□□□ -0.93
TRAPPC1-203ENST00000571739 LIMA1Q9UHB6 759 aaKnown RBP9.22□□□□□ -0.93
TRAPPC1-203ENST00000571739 CHORDC1Q9UHD1 332 aaPredicted RBP9.22□□□□□ -0.93
TRAPPC1-203ENST00000571739 SORCS3Q9UPU3 1222 aa9.22□□□□□ -0.93
TRAPPC1-203ENST00000571739 PCDHB4Q9Y5E5 795 aa9.22□□□□□ -0.93
TRAPPC1-203ENST00000571739 GREB1Q4ZG55 1949 aa9.22□□□□□ -0.93
TRAPPC1-203ENST00000571739 NCANO14594 1321 aa9.22□□□□□ -0.93
TRAPPC1-203ENST00000571739 BECN2A8MW95 431 aa9.21□□□□□ -0.94
TRAPPC1-203ENST00000571739 FGF19O95750 216 aa9.21□□□□□ -0.94
TRAPPC1-203ENST00000571739 VDRP11473 427 aa9.21□□□□□ -0.94
TRAPPC1-203ENST00000571739 ATP1A3P13637 1013 aa9.21□□□□□ -0.94
TRAPPC1-203ENST00000571739 ALADP13716 330 aa9.21□□□□□ -0.94
TRAPPC1-203ENST00000571739 ANXA13P27216 316 aa9.21□□□□□ -0.94
TRAPPC1-203ENST00000571739 CDC25CP30307 473 aa9.21□□□□□ -0.94
TRAPPC1-203ENST00000571739 VIPR2P41587 438 aa9.21□□□□□ -0.94
TRAPPC1-203ENST00000571739 PGFP49763 221 aa9.21□□□□□ -0.94
TRAPPC1-203ENST00000571739 ZNF165P49910 485 aa9.21□□□□□ -0.94
TRAPPC1-203ENST00000571739 ZNF132P52740 706 aa9.21□□□□□ -0.94
TRAPPC1-203ENST00000571739 COPB1P53618 953 aaKnown RBP9.21□□□□□ -0.94
TRAPPC1-203ENST00000571739 TAF10Q12962 218 aa9.21□□□□□ -0.94
TRAPPC1-203ENST00000571739 TDGQ13569 410 aa9.21□□□□□ -0.94
TRAPPC1-203ENST00000571739 TAF12Q16514 161 aa9.21□□□□□ -0.94
TRAPPC1-203ENST00000571739 ZSCAN23Q3MJ62 389 aa9.21□□□□□ -0.94
TRAPPC1-203ENST00000571739 PKDCCQ504Y2 493 aa9.21□□□□□ -0.94
TRAPPC1-203ENST00000571739 GPR158Q5T848 1215 aa9.21□□□□□ -0.94
TRAPPC1-203ENST00000571739 GPRIN1Q7Z2K8 1008 aa9.21□□□□□ -0.94
TRAPPC1-203ENST00000571739 TTC30AQ86WT1 665 aa9.21□□□□□ -0.94
TRAPPC1-203ENST00000571739 ARID3BQ8IVW6 561 aaPredicted RBP9.21□□□□□ -0.94
TRAPPC1-203ENST00000571739 ANKRD52Q8NB46 1076 aa9.21□□□□□ -0.94
TRAPPC1-203ENST00000571739 ZSCAN18Q8TBC5 510 aaPredicted RBP9.21□□□□□ -0.94
TRAPPC1-203ENST00000571739 SMARCD2Q92925 531 aa9.21□□□□□ -0.94
TRAPPC1-203ENST00000571739 JAKMIP2Q96AA8 810 aa9.21□□□□□ -0.94
TRAPPC1-203ENST00000571739 SMARCD1Q96GM5 515 aa9.21□□□□□ -0.94
TRAPPC1-203ENST00000571739 SLC22A12Q96S37 553 aa9.21□□□□□ -0.94
TRAPPC1-203ENST00000571739 KXD1Q9BQD3 176 aa9.21□□□□□ -0.94
TRAPPC1-203ENST00000571739 GPR88Q9GZN0 384 aa9.21□□□□□ -0.94
TRAPPC1-203ENST00000571739 RNF38Q9H0F5 515 aa9.21□□□□□ -0.94
TRAPPC1-203ENST00000571739 TRPV4Q9HBA0 871 aa9.21□□□□□ -0.94
TRAPPC1-203ENST00000571739 DMAP1Q9NPF5 467 aaPredicted RBP9.21□□□□□ -0.94
TRAPPC1-203ENST00000571739 ACP6Q9NPH0 428 aa9.21□□□□□ -0.94
TRAPPC1-203ENST00000571739 KRT82Q9NSB4 513 aa9.21□□□□□ -0.94
TRAPPC1-203ENST00000571739 DNAJC12Q9UKB3 198 aa9.21□□□□□ -0.94
TRAPPC1-203ENST00000571739 FAM92AA1XBS5 289 aa9.2□□□□□ -0.94
TRAPPC1-203ENST00000571739 ZNF840PA6NDX5 716 aa9.2□□□□□ -0.94
TRAPPC1-203ENST00000571739 SMTNL1A8MU46 457 aa9.2□□□□□ -0.94
TRAPPC1-203ENST00000571739 TULP2O00295 520 aa9.2□□□□□ -0.94
TRAPPC1-203ENST00000571739 O00370 1275 aa9.2□□□□□ -0.94
TRAPPC1-203ENST00000571739 FOXN3O00409 490 aaPredicted RBP9.2□□□□□ -0.94
TRAPPC1-203ENST00000571739 ECI2O75521 394 aa9.2□□□□□ -0.94
TRAPPC1-203ENST00000571739 GABBR2O75899 941 aa9.2□□□□□ -0.94
TRAPPC1-203ENST00000571739 PAEPP09466 180 aa9.2□□□□□ -0.94
TRAPPC1-203ENST00000571739 FAM200BP0CF97 657 aa9.2□□□□□ -0.94
TRAPPC1-203ENST00000571739 NPR3P17342 541 aa9.2□□□□□ -0.94
TRAPPC1-203ENST00000571739 CDK11BP21127 795 aaKnown RBP9.2□□□□□ -0.94
TRAPPC1-203ENST00000571739 YWHAQP27348 245 aa9.2□□□□□ -0.94
TRAPPC1-203ENST00000571739 WEE1P30291 646 aa9.2□□□□□ -0.94
TRAPPC1-203ENST00000571739 KLK7P49862 253 aa9.2□□□□□ -0.94
TRAPPC1-203ENST00000571739 SLC5A3P53794 718 aa9.2□□□□□ -0.94
TRAPPC1-203ENST00000571739 MFAP3P55082 362 aa9.2□□□□□ -0.94
TRAPPC1-203ENST00000571739 YWHAEP62258 255 aaKnown RBP9.2□□□□□ -0.94
TRAPPC1-203ENST00000571739 GPC5P78333 572 aa9.2□□□□□ -0.94
TRAPPC1-203ENST00000571739 ZXDBP98169 803 aa9.2□□□□□ -0.94
TRAPPC1-203ENST00000571739 CNGA2Q16280 664 aa9.2□□□□□ -0.94
TRAPPC1-203ENST00000571739 ARHGAP44Q17R89 818 aa9.2□□□□□ -0.94
TRAPPC1-203ENST00000571739 IER5LQ5T953 404 aa9.2□□□□□ -0.94
TRAPPC1-203ENST00000571739 KLHDC7AQ5VTJ3 777 aa9.2□□□□□ -0.94
TRAPPC1-203ENST00000571739 VITQ6UXI7 678 aa9.2□□□□□ -0.94
TRAPPC1-203ENST00000571739 MON1AQ86VX9 555 aa9.2□□□□□ -0.94
TRAPPC1-203ENST00000571739 CMTM8Q8IZV2 173 aa9.2□□□□□ -0.94
TRAPPC1-203ENST00000571739 MAB21L3Q8N8X9 362 aa9.2□□□□□ -0.94
TRAPPC1-203ENST00000571739 RBBP8NLQ8NC74 664 aaPredicted RBP9.2□□□□□ -0.94
TRAPPC1-203ENST00000571739 UBA3Q8TBC4 463 aa9.2□□□□□ -0.94
TRAPPC1-203ENST00000571739 ELSPBP1Q96BH3 223 aa9.2□□□□□ -0.94
TRAPPC1-203ENST00000571739 ASIC4Q96FT7 647 aa9.2□□□□□ -0.94
TRAPPC1-203ENST00000571739 NAA15Q9BXJ9 866 aaKnown RBP9.2□□□□□ -0.94
TRAPPC1-203ENST00000571739 UBXN6Q9BZV1 441 aa9.2□□□□□ -0.94
TRAPPC1-203ENST00000571739 NAT10Q9H0A0 1025 aaKnown RBP9.2□□□□□ -0.94
TRAPPC1-203ENST00000571739 SMG9Q9H0W8 520 aaKnown RBP9.2□□□□□ -0.94
TRAPPC1-203ENST00000571739 CBX8Q9HC52 389 aa9.2□□□□□ -0.94
TRAPPC1-203ENST00000571739 ZFP14Q9HCL3 533 aa9.2□□□□□ -0.94
TRAPPC1-203ENST00000571739 UXTQ9UBK9 157 aaPredicted RBP9.2□□□□□ -0.94
TRAPPC1-203ENST00000571739 APEX2Q9UBZ4 518 aa9.2□□□□□ -0.94
TRAPPC1-203ENST00000571739 TSPAN16Q9UKR8 245 aa9.2□□□□□ -0.94
TRAPPC1-203ENST00000571739 KIAA1257Q9ULG3 409 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms