RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 LRCH4O75427 683 aa20.42■□□□□ 0.86
RPAIN-210ENST00000571613 FAM200BP0CF97 657 aa20.42■□□□□ 0.86
RPAIN-210ENST00000571613 PDGFRAP16234 1089 aa20.42■□□□□ 0.86
RPAIN-210ENST00000571613 DSC1Q08554 894 aa20.42■□□□□ 0.86
RPAIN-210ENST00000571613 EFHC1Q5JVL4 640 aa20.42■□□□□ 0.86
RPAIN-210ENST00000571613 SLC26A9Q7LBE3 791 aa20.42■□□□□ 0.86
RPAIN-210ENST00000571613 MYCBPAPQ8TBZ2 947 aa20.42■□□□□ 0.86
RPAIN-210ENST00000571613 UBXN6Q9BZV1 441 aa20.42■□□□□ 0.86
RPAIN-210ENST00000571613 PAPSS1O43252 624 aaPredicted RBP20.41■□□□□ 0.86
RPAIN-210ENST00000571613 HCRTO43612 131 aa20.41■□□□□ 0.86
RPAIN-210ENST00000571613 ZMYND10O75800 440 aa20.41■□□□□ 0.86
RPAIN-210ENST00000571613 SEC31AO94979 1220 aaKnown RBP20.41■□□□□ 0.86
RPAIN-210ENST00000571613 TJP3O95049 919 aa20.41■□□□□ 0.86
RPAIN-210ENST00000571613 KRT1P04264 644 aa20.41■□□□□ 0.86
RPAIN-210ENST00000571613 RARAP10276 462 aa20.41■□□□□ 0.86
RPAIN-210ENST00000571613 SDC4P31431 198 aa20.41■□□□□ 0.86
RPAIN-210ENST00000571613 GBP1P32455 592 aa20.41■□□□□ 0.86
RPAIN-210ENST00000571613 RNASELQ05823 741 aaKnown RBP20.41■□□□□ 0.86
RPAIN-210ENST00000571613 NNTQ13423 1086 aa20.41■□□□□ 0.86
RPAIN-210ENST00000571613 MDH1BQ5I0G3 518 aa20.41■□□□□ 0.86
RPAIN-210ENST00000571613 ADAT2Q7Z6V5 191 aaKnown RBP20.41■□□□□ 0.86
RPAIN-210ENST00000571613 EMC1Q8N766 993 aa20.41■□□□□ 0.86
RPAIN-210ENST00000571613 RXFP2Q8WXD0 754 aa20.41■□□□□ 0.86
RPAIN-210ENST00000571613 PAAF1Q9BRP4 392 aa20.41■□□□□ 0.86
RPAIN-210ENST00000571613 ACBD3Q9H3P7 528 aa20.41■□□□□ 0.86
RPAIN-210ENST00000571613 FAM114A2Q9NRY5 505 aa20.41■□□□□ 0.86
RPAIN-210ENST00000571613 CACNG4Q9UBN1 327 aa20.41■□□□□ 0.86
RPAIN-210ENST00000571613 NR2E1Q9Y466 385 aa20.41■□□□□ 0.86
RPAIN-210ENST00000571613 TDRD15B5MCY1 1934 aaKnown RBP20.4■□□□□ 0.86
RPAIN-210ENST00000571613 TULP2O00295 520 aa20.4■□□□□ 0.86
RPAIN-210ENST00000571613 MYCP01106 439 aaPredicted RBP20.4■□□□□ 0.86
RPAIN-210ENST00000571613 CAPN2P17655 700 aa20.4■□□□□ 0.86
RPAIN-210ENST00000571613 ACAT1P24752 427 aaKnown RBP20.4■□□□□ 0.86
RPAIN-210ENST00000571613 GJC1P36383 396 aa20.4■□□□□ 0.86
RPAIN-210ENST00000571613 SLC25A11Q02978 314 aaKnown RBP20.4■□□□□ 0.86
RPAIN-210ENST00000571613 SIX1Q15475 284 aaPredicted RBP20.4■□□□□ 0.86
RPAIN-210ENST00000571613 CLLU1OSQ5K130 101 aa20.4■□□□□ 0.86
RPAIN-210ENST00000571613 CCDC137Q6PK04 289 aaKnown RBP20.4■□□□□ 0.86
RPAIN-210ENST00000571613 SCUBE3Q8IX30 993 aa20.4■□□□□ 0.86
RPAIN-210ENST00000571613 GRK7Q8WTQ7 553 aa20.4■□□□□ 0.86
RPAIN-210ENST00000571613 SEC14L1Q92503 715 aa20.4■□□□□ 0.86
RPAIN-210ENST00000571613 HIPK3Q9H422 1215 aa20.4■□□□□ 0.86
RPAIN-210ENST00000571613 LRFN2Q9ULH4 789 aa20.4■□□□□ 0.86
RPAIN-210ENST00000571613 PCDHB8Q9UN66 801 aa20.4■□□□□ 0.86
RPAIN-210ENST00000571613 BHMG1C9JSJ3 638 aaPredicted RBP20.39■□□□□ 0.86
RPAIN-210ENST00000571613 ATP2C2O75185 946 aa20.39■□□□□ 0.86
RPAIN-210ENST00000571613 RALAP11233 206 aa20.39■□□□□ 0.86
RPAIN-210ENST00000571613 COILP38432 576 aaPredicted RBP20.39■□□□□ 0.86
RPAIN-210ENST00000571613 DRG2P55039 364 aaKnown RBP20.39■□□□□ 0.86
RPAIN-210ENST00000571613 DAB2IPQ5VWQ8 1189 aa20.39■□□□□ 0.86
RPAIN-210ENST00000571613 SYDE1Q6ZW31 735 aaPredicted RBP20.39■□□□□ 0.86
RPAIN-210ENST00000571613 CTU1Q7Z7A3 348 aaKnown RBP20.39■□□□□ 0.86
RPAIN-210ENST00000571613 PIGZQ86VD9 579 aa20.39■□□□□ 0.86
RPAIN-210ENST00000571613 ANKLE1Q8NAG6 615 aa20.39■□□□□ 0.86
RPAIN-210ENST00000571613 AENQ8WTP8 325 aaKnown RBP20.39■□□□□ 0.86
RPAIN-210ENST00000571613 SLCO2A1Q92959 643 aa20.39■□□□□ 0.86
RPAIN-210ENST00000571613 SLITRK1Q96PX8 696 aa20.39■□□□□ 0.86
RPAIN-210ENST00000571613 LPIN3Q9BQK8 851 aa20.39■□□□□ 0.86
RPAIN-210ENST00000571613 FUT8Q9BYC5 575 aa20.39■□□□□ 0.86
RPAIN-210ENST00000571613 LRRC4Q9HBW1 653 aa20.39■□□□□ 0.86
RPAIN-210ENST00000571613 CRTAC1Q9NQ79 661 aa20.39■□□□□ 0.86
RPAIN-210ENST00000571613 TBC1D13Q9NVG8 400 aa20.39■□□□□ 0.86
RPAIN-210ENST00000571613 USP18Q9UMW8 372 aa20.39■□□□□ 0.86
RPAIN-210ENST00000571613 TTI1O43156 1089 aa20.38■□□□□ 0.85
RPAIN-210ENST00000571613 FBXO21O94952 628 aa20.38■□□□□ 0.85
RPAIN-210ENST00000571613 CXCL10P02778 98 aa20.38■□□□□ 0.85
RPAIN-210ENST00000571613 TKTP29401 623 aaKnown RBP20.38■□□□□ 0.85
RPAIN-210ENST00000571613 PTPN9P43378 593 aa20.38■□□□□ 0.85
RPAIN-210ENST00000571613 TSPY1Q01534 308 aa20.38■□□□□ 0.85
RPAIN-210ENST00000571613 KLF1Q13351 362 aaPredicted RBP20.38■□□□□ 0.85
RPAIN-210ENST00000571613 PKN2Q16513 984 aaKnown RBP20.38■□□□□ 0.85
RPAIN-210ENST00000571613 CCNG2Q16589 344 aa20.38■□□□□ 0.85
RPAIN-210ENST00000571613 TFDP3Q5H9I0 405 aa20.38■□□□□ 0.85
RPAIN-210ENST00000571613 OVOS1Q6IE37 1185 aa20.38■□□□□ 0.85
RPAIN-210ENST00000571613 FBXO46Q6PJ61 603 aaPredicted RBP20.38■□□□□ 0.85
RPAIN-210ENST00000571613 CD300LGQ6UXG3 332 aa20.38■□□□□ 0.85
RPAIN-210ENST00000571613 CCDC105Q8IYK2 499 aa20.38■□□□□ 0.85
RPAIN-210ENST00000571613 COLGALT2Q8IYK4 626 aa20.38■□□□□ 0.85
RPAIN-210ENST00000571613 SMARCD1Q96GM5 515 aa20.38■□□□□ 0.85
RPAIN-210ENST00000571613 TBCBQ99426 244 aa20.38■□□□□ 0.85
RPAIN-210ENST00000571613 MRPL9Q9BYD2 267 aaKnown RBP20.38■□□□□ 0.85
RPAIN-210ENST00000571613 B3GNT5Q9BYG0 378 aa20.38■□□□□ 0.85
RPAIN-210ENST00000571613 VIPAS39Q9H9C1 493 aa20.38■□□□□ 0.85
RPAIN-210ENST00000571613 TIMM13Q9Y5L4 95 aaPredicted RBP20.38■□□□□ 0.85
RPAIN-210ENST00000571613 MAP2K7O14733 419 aa20.38■□□□□ 0.85
RPAIN-210ENST00000571613 MIPP30301 263 aa20.38■□□□□ 0.85
RPAIN-210ENST00000571613 BRCC3P46736 316 aa20.38■□□□□ 0.85
RPAIN-210ENST00000571613 MRPS25P82663 173 aaKnown RBP20.38■□□□□ 0.85
RPAIN-210ENST00000571613 LMNB2Q03252 620 aa20.38■□□□□ 0.85
RPAIN-210ENST00000571613 GPS2Q13227 327 aa20.38■□□□□ 0.85
RPAIN-210ENST00000571613 GPNMBQ14956 572 aa20.38■□□□□ 0.85
RPAIN-210ENST00000571613 BOLA3Q53S33 107 aa20.38■□□□□ 0.85
RPAIN-210ENST00000571613 INTS6LQ5JSJ4 861 aaKnown RBP20.38■□□□□ 0.85
RPAIN-210ENST00000571613 FAM171BQ6P995 826 aa20.38■□□□□ 0.85
RPAIN-210ENST00000571613 SPOCD1Q6ZMY3 1216 aa20.38■□□□□ 0.85
RPAIN-210ENST00000571613 CLEC20AQ6ZU45 233 aa20.38■□□□□ 0.85
RPAIN-210ENST00000571613 PAQR9Q6ZVX9 377 aa20.38■□□□□ 0.85
RPAIN-210ENST00000571613 FAM35AQ86V20 835 aa20.38■□□□□ 0.85
RPAIN-210ENST00000571613 IFT81Q8WYA0 676 aa20.38■□□□□ 0.85
RPAIN-210ENST00000571613 CAVIN3Q969G5 261 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms