RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 KIF26AQ9ULI4 1882 aaPredicted RBP7.41□□□□□ -1.22
SMG6-209ENST00000571442 GTPBP10A4D1E9 387 aaKnown RBP7.41□□□□□ -1.22
SMG6-209ENST00000571442 ANHXE9PGG2 379 aa7.41□□□□□ -1.22
SMG6-209ENST00000571442 PI4K2BG5E9Z4 385 aa7.41□□□□□ -1.22
SMG6-209ENST00000571442 TEX33O43247 280 aa7.41□□□□□ -1.22
SMG6-209ENST00000571442 GPR37L1O60883 481 aa7.41□□□□□ -1.22
SMG6-209ENST00000571442 AP1G2O75843 785 aa7.41□□□□□ -1.22
SMG6-209ENST00000571442 EEF1GP26641 437 aaKnown RBP7.41□□□□□ -1.22
SMG6-209ENST00000571442 MAP3K7CLP57077 242 aa7.41□□□□□ -1.22
SMG6-209ENST00000571442 GCNT1Q02742 428 aa7.41□□□□□ -1.22
SMG6-209ENST00000571442 IFRD2Q12894 506 aaPredicted RBP7.41□□□□□ -1.22
SMG6-209ENST00000571442 HTR4Q13639 388 aa7.41□□□□□ -1.22
SMG6-209ENST00000571442 MAPRE1Q15691 268 aaKnown RBP7.41□□□□□ -1.22
SMG6-209ENST00000571442 ARHGAP44Q17R89 818 aa7.41□□□□□ -1.22
SMG6-209ENST00000571442 GOLGA7BQ2TAP0 167 aa7.41□□□□□ -1.22
SMG6-209ENST00000571442 PKDCCQ504Y2 493 aa7.41□□□□□ -1.22
SMG6-209ENST00000571442 FAM78AQ5JUQ0 283 aa7.41□□□□□ -1.22
SMG6-209ENST00000571442 ARHGAP17Q68EM7 881 aa7.41□□□□□ -1.22
SMG6-209ENST00000571442 TANGO2Q6ICL3 276 aa7.41□□□□□ -1.22
SMG6-209ENST00000571442 TMEM270Q6UE05 265 aa7.41□□□□□ -1.22
SMG6-209ENST00000571442 VSTM1Q6UX27 236 aa7.41□□□□□ -1.22
SMG6-209ENST00000571442 GBP6Q6ZN66 633 aa7.41□□□□□ -1.22
SMG6-209ENST00000571442 OTOP3Q7RTS5 596 aa7.41□□□□□ -1.22
SMG6-209ENST00000571442 FAM114A1Q8IWE2 563 aa7.41□□□□□ -1.22
SMG6-209ENST00000571442 RBBP8NLQ8NC74 664 aaPredicted RBP7.41□□□□□ -1.22
SMG6-209ENST00000571442 CCDC150Q8NCX0 1101 aa7.41□□□□□ -1.22
SMG6-209ENST00000571442 JAKMIP2Q96AA8 810 aa7.41□□□□□ -1.22
SMG6-209ENST00000571442 FAXDC2Q96IV6 333 aa7.41□□□□□ -1.22
SMG6-209ENST00000571442 TNIP3Q96KP6 325 aa7.41□□□□□ -1.22
SMG6-209ENST00000571442 SPATA17Q96L03 361 aa7.41□□□□□ -1.22
SMG6-209ENST00000571442 C8orf48Q96LL4 319 aa7.41□□□□□ -1.22
SMG6-209ENST00000571442 MYRFLQ96LU7 910 aa7.41□□□□□ -1.22
SMG6-209ENST00000571442 HEXIM2Q96MH2 286 aaKnown RBP7.41□□□□□ -1.22
SMG6-209ENST00000571442 NAP1L5Q96NT1 182 aaPredicted RBP7.41□□□□□ -1.22
SMG6-209ENST00000571442 KXD1Q9BQD3 176 aa7.41□□□□□ -1.22
SMG6-209ENST00000571442 TTLL2Q9BWV7 592 aa7.41□□□□□ -1.22
SMG6-209ENST00000571442 LSM14BQ9BX40 385 aaKnown RBP7.41□□□□□ -1.22
SMG6-209ENST00000571442 NAA15Q9BXJ9 866 aaKnown RBP7.41□□□□□ -1.22
SMG6-209ENST00000571442 SLC46A2Q9BY10 475 aa7.41□□□□□ -1.22
SMG6-209ENST00000571442 SMG9Q9H0W8 520 aaKnown RBP7.41□□□□□ -1.22
SMG6-209ENST00000571442 GANQ9H2C0 597 aa7.41□□□□□ -1.22
SMG6-209ENST00000571442 KCNK12Q9HB15 430 aa7.41□□□□□ -1.22
SMG6-209ENST00000571442 CSNK1G1Q9HCP0 422 aa7.41□□□□□ -1.22
SMG6-209ENST00000571442 C11orf16Q9NQ32 467 aa7.41□□□□□ -1.22
SMG6-209ENST00000571442 APEX2Q9UBZ4 518 aa7.41□□□□□ -1.22
SMG6-209ENST00000571442 DNAJC12Q9UKB3 198 aa7.41□□□□□ -1.22
SMG6-209ENST00000571442 CNTN6Q9UQ52 1028 aa7.41□□□□□ -1.22
SMG6-209ENST00000571442 SIK3Q9Y2K2 1263 aa7.41□□□□□ -1.22
SMG6-209ENST00000571442 NR2E1Q9Y466 385 aa7.41□□□□□ -1.22
SMG6-209ENST00000571442 ASB3Q9Y575 518 aa7.41□□□□□ -1.22
SMG6-209ENST00000571442 NUMBLQ9Y6R0 609 aa7.41□□□□□ -1.22
SMG6-209ENST00000571442 ZNF318Q5VUA4 2279 aa7.41□□□□□ -1.22
SMG6-209ENST00000571442 ZDBF2Q9HCK1 2354 aa7.41□□□□□ -1.22
SMG6-209ENST00000571442 HELZP42694 1942 aaKnown RBP7.4□□□□□ -1.22
SMG6-209ENST00000571442 C2orf78A6NCI8 922 aa7.4□□□□□ -1.22
SMG6-209ENST00000571442 LRRC10BA6NIK2 292 aa7.4□□□□□ -1.22
SMG6-209ENST00000571442 LGALS16A8MUM7 142 aa7.4□□□□□ -1.22
SMG6-209ENST00000571442 O00370 1275 aa7.4□□□□□ -1.22
SMG6-209ENST00000571442 FOXN3O00409 490 aaPredicted RBP7.4□□□□□ -1.22
SMG6-209ENST00000571442 TRIM66O15016 1216 aa7.4□□□□□ -1.22
SMG6-209ENST00000571442 PRAMEF12O95522 483 aa7.4□□□□□ -1.22
SMG6-209ENST00000571442 CSH1P0DML2 217 aa7.4□□□□□ -1.22
SMG6-209ENST00000571442 CSH2P0DML3 217 aa7.4□□□□□ -1.22
SMG6-209ENST00000571442 ALADP13716 330 aa7.4□□□□□ -1.22
SMG6-209ENST00000571442 PTMSP20962 102 aa7.4□□□□□ -1.22
SMG6-209ENST00000571442 TBXAS1P24557 533 aaPredicted RBP7.4□□□□□ -1.22
SMG6-209ENST00000571442 VIPR2P41587 438 aa7.4□□□□□ -1.22
SMG6-209ENST00000571442 SLC5A3P53794 718 aa7.4□□□□□ -1.22
SMG6-209ENST00000571442 RPL10AP62906 217 aaKnown RBP7.4□□□□□ -1.22
SMG6-209ENST00000571442 ZXDBP98169 803 aa7.4□□□□□ -1.22
SMG6-209ENST00000571442 PDE4CQ08493 712 aa7.4□□□□□ -1.22
SMG6-209ENST00000571442 TAF10Q12962 218 aa7.4□□□□□ -1.22
SMG6-209ENST00000571442 VEPH1Q14D04 833 aa7.4□□□□□ -1.22
SMG6-209ENST00000571442 SKOR2Q2VWA4 1001 aaPredicted RBP7.4□□□□□ -1.22
SMG6-209ENST00000571442 GPR158Q5T848 1215 aa7.4□□□□□ -1.22
SMG6-209ENST00000571442 CYP4A22Q5TCH4 519 aa7.4□□□□□ -1.22
SMG6-209ENST00000571442 KLHDC7AQ5VTJ3 777 aa7.4□□□□□ -1.22
SMG6-209ENST00000571442 TXNDC8Q6A555 127 aa7.4□□□□□ -1.22
SMG6-209ENST00000571442 DENND5BQ6ZUT9 1274 aa7.4□□□□□ -1.22
SMG6-209ENST00000571442 BHLHA9Q7RTU4 235 aa7.4□□□□□ -1.22
SMG6-209ENST00000571442 ITIH5Q86UX2 942 aa7.4□□□□□ -1.22
SMG6-209ENST00000571442 ELMOD1Q8N336 334 aa7.4□□□□□ -1.22
SMG6-209ENST00000571442 UBA3Q8TBC4 463 aa7.4□□□□□ -1.22
SMG6-209ENST00000571442 ZSCAN18Q8TBC5 510 aaPredicted RBP7.4□□□□□ -1.22
SMG6-209ENST00000571442 SHC3Q92529 594 aa7.4□□□□□ -1.22
SMG6-209ENST00000571442 NDRG1Q92597 394 aaKnown RBP7.4□□□□□ -1.22
SMG6-209ENST00000571442 TRMT2BQ96GJ1 504 aaKnown RBP7.4□□□□□ -1.22
SMG6-209ENST00000571442 SMARCD1Q96GM5 515 aa7.4□□□□□ -1.22
SMG6-209ENST00000571442 ASB16Q96NS5 453 aa7.4□□□□□ -1.22
SMG6-209ENST00000571442 ATXN3LQ9H3M9 355 aa7.4□□□□□ -1.22
SMG6-209ENST00000571442 DMAP1Q9NPF5 467 aaPredicted RBP7.4□□□□□ -1.22
SMG6-209ENST00000571442 OSER1Q9NX31 292 aa7.4□□□□□ -1.22
SMG6-209ENST00000571442 IL37Q9NZH6 218 aa7.4□□□□□ -1.22
SMG6-209ENST00000571442 GMIPQ9P107 970 aa7.4□□□□□ -1.22
SMG6-209ENST00000571442 TSPAN16Q9UKR8 245 aa7.4□□□□□ -1.22
SMG6-209ENST00000571442 CCL26Q9Y258 94 aa7.4□□□□□ -1.22
SMG6-209ENST00000571442 TICRRQ7Z2Z1 1910 aa7.39□□□□□ -1.23
SMG6-209ENST00000571442 FAM170AA1A519 330 aa7.39□□□□□ -1.23
SMG6-209ENST00000571442 FAM92AA1XBS5 289 aa7.39□□□□□ -1.23
SMG6-209ENST00000571442 PRR33A8MZF0 331 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms