RNA–Protein interactions for RNA: ENST00000571190.1

CIITA-206, Transcript of class II major histocompatibility complex transactivator, humanhuman

Gene CIITA, Length 479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-206ENST00000571190 RNF38Q9H0F5 515 aa18.75■□□□□ 0.59
CIITA-206ENST00000571190 R3HCC1Q9Y3T6 440 aaKnown RBP18.75■□□□□ 0.59
CIITA-206ENST00000571190 ZNF840PA6NDX5 716 aa18.74■□□□□ 0.59
CIITA-206ENST00000571190 F8VP50 259 aa18.74■□□□□ 0.59
CIITA-206ENST00000571190 K7ELQ4 463 aaPredicted RBP18.74■□□□□ 0.59
CIITA-206ENST00000571190 DCLK1O15075 740 aa18.74■□□□□ 0.59
CIITA-206ENST00000571190 FOXD2O60548 495 aaPredicted RBP18.74■□□□□ 0.59
CIITA-206ENST00000571190 TACC1O75410 805 aa18.74■□□□□ 0.59
CIITA-206ENST00000571190 CCDC192P0DO97 292 aa18.74■□□□□ 0.59
CIITA-206ENST00000571190 DLATP10515 647 aaKnown RBP18.74■□□□□ 0.59
CIITA-206ENST00000571190 GNL1P36915 607 aaPredicted RBP18.74■□□□□ 0.59
CIITA-206ENST00000571190 CYP24A1Q07973 514 aa18.74■□□□□ 0.59
CIITA-206ENST00000571190 DMC1Q14565 340 aa18.74■□□□□ 0.59
CIITA-206ENST00000571190 MAPRE1Q15691 268 aaKnown RBP18.74■□□□□ 0.59
CIITA-206ENST00000571190 PLK5Q496M5 336 aa18.74■□□□□ 0.59
CIITA-206ENST00000571190 MDH1BQ5I0G3 518 aa18.74■□□□□ 0.59
CIITA-206ENST00000571190 NELFCDQ8IXH7 590 aa18.74■□□□□ 0.59
CIITA-206ENST00000571190 C8orf48Q96LL4 319 aa18.74■□□□□ 0.59
CIITA-206ENST00000571190 CGRRF1Q99675 332 aa18.74■□□□□ 0.59
CIITA-206ENST00000571190 DPEP3Q9H4B8 488 aa18.74■□□□□ 0.59
CIITA-206ENST00000571190 SMOC1Q9H4F8 434 aa18.74■□□□□ 0.59
CIITA-206ENST00000571190 LEFTY2O00292 366 aa18.73■□□□□ 0.59
CIITA-206ENST00000571190 OLFM2O95897 454 aa18.73■□□□□ 0.59
CIITA-206ENST00000571190 FAM163BP0C2L3 166 aa18.73■□□□□ 0.59
CIITA-206ENST00000571190 CYP2J2P51589 502 aa18.73■□□□□ 0.59
CIITA-206ENST00000571190 LIMK1P53667 647 aa18.73■□□□□ 0.59
CIITA-206ENST00000571190 NOP14P78316 857 aaKnown RBP18.73■□□□□ 0.59
CIITA-206ENST00000571190 IQUBQ8NA54 791 aa18.73■□□□□ 0.59
CIITA-206ENST00000571190 PLEKHO2Q8TD55 490 aa18.73■□□□□ 0.59
CIITA-206ENST00000571190 CCDC127Q96BQ5 260 aa18.73■□□□□ 0.59
CIITA-206ENST00000571190 XYLT2Q9H1B5 865 aa18.73■□□□□ 0.59
CIITA-206ENST00000571190 DUSP15Q9H1R2 295 aaPredicted RBP18.73■□□□□ 0.59
CIITA-206ENST00000571190 TRPM5Q9NZQ8 1165 aa18.73■□□□□ 0.59
CIITA-206ENST00000571190 EBF1Q9UH73 591 aa18.73■□□□□ 0.59
CIITA-206ENST00000571190 K7EQS6 105 aa18.72■□□□□ 0.59
CIITA-206ENST00000571190 TRIM66O15016 1216 aa18.72■□□□□ 0.59
CIITA-206ENST00000571190 CUTAO60888 179 aa18.72■□□□□ 0.59
CIITA-206ENST00000571190 YEATS4O95619 227 aa18.72■□□□□ 0.59
CIITA-206ENST00000571190 CHRM1P11229 460 aaPredicted RBP18.72■□□□□ 0.59
CIITA-206ENST00000571190 PFKLP17858 780 aa18.72■□□□□ 0.59
CIITA-206ENST00000571190 PTPN1P18031 435 aaKnown RBP18.72■□□□□ 0.59
CIITA-206ENST00000571190 TNNI1P19237 187 aa18.72■□□□□ 0.59
CIITA-206ENST00000571190 SLC7A9P82251 487 aa18.72■□□□□ 0.59
CIITA-206ENST00000571190 AMPD3Q01432 767 aa18.72■□□□□ 0.59
CIITA-206ENST00000571190 MESP2Q0VG99 397 aa18.72■□□□□ 0.59
CIITA-206ENST00000571190 NR1H3Q13133 447 aa18.72■□□□□ 0.59
CIITA-206ENST00000571190 WDR72Q3MJ13 1102 aa18.72■□□□□ 0.59
CIITA-206ENST00000571190 AASDHQ4L235 1098 aaPredicted RBP18.72■□□□□ 0.59
CIITA-206ENST00000571190 UNC13DQ70J99 1090 aa18.72■□□□□ 0.59
CIITA-206ENST00000571190 ADGRG2Q8IZP9 1017 aa18.72■□□□□ 0.59
CIITA-206ENST00000571190 XXYLT1Q8NBI6 393 aa18.72■□□□□ 0.59
CIITA-206ENST00000571190 OR6B3Q8NGW1 331 aa18.72■□□□□ 0.59
CIITA-206ENST00000571190 USP33Q8TEY7 942 aa18.72■□□□□ 0.59
CIITA-206ENST00000571190 B3GNT5Q9BYG0 378 aa18.72■□□□□ 0.59
CIITA-206ENST00000571190 BACH2Q9BYV9 841 aa18.72■□□□□ 0.59
CIITA-206ENST00000571190 ZNF518BQ9C0D4 1074 aa18.72■□□□□ 0.59
CIITA-206ENST00000571190 BLZF1Q9H2G9 400 aa18.72■□□□□ 0.59
CIITA-206ENST00000571190 SNX25Q9H3E2 840 aa18.72■□□□□ 0.59
CIITA-206ENST00000571190 PCDHGA5Q9Y5G8 931 aa18.72■□□□□ 0.59
CIITA-206ENST00000571190 CLDN5O00501 218 aa18.71■□□□□ 0.59
CIITA-206ENST00000571190 NFATC1O95644 943 aa18.71■□□□□ 0.59
CIITA-206ENST00000571190 APBB3O95704 486 aa18.71■□□□□ 0.59
CIITA-206ENST00000571190 STAU1O95793 577 aaKnown RBP18.71■□□□□ 0.59
CIITA-206ENST00000571190 OAS1P00973 400 aaKnown RBP18.71■□□□□ 0.59
CIITA-206ENST00000571190 CYP17A1P05093 508 aa18.71■□□□□ 0.59
CIITA-206ENST00000571190 ANXA13P27216 316 aa18.71■□□□□ 0.59
CIITA-206ENST00000571190 MPLP40238 635 aa18.71■□□□□ 0.59
CIITA-206ENST00000571190 MYL6P60660 151 aa18.71■□□□□ 0.59
CIITA-206ENST00000571190 PSMD2Q13200 908 aa18.71■□□□□ 0.59
CIITA-206ENST00000571190 BMT2Q1RMZ1 405 aa18.71■□□□□ 0.59
CIITA-206ENST00000571190 HS2ST1Q7LGA3 356 aa18.71■□□□□ 0.59
CIITA-206ENST00000571190 EXOC4Q96A65 974 aa18.71■□□□□ 0.59
CIITA-206ENST00000571190 ZNF396Q96N95 335 aaPredicted RBP18.71■□□□□ 0.59
CIITA-206ENST00000571190 FNBP1Q96RU3 617 aa18.71■□□□□ 0.59
CIITA-206ENST00000571190 CPQQ9Y646 472 aa18.71■□□□□ 0.59
CIITA-206ENST00000571190 SCAMP3O14828 347 aaKnown RBP18.7■□□□□ 0.58
CIITA-206ENST00000571190 POLR2DO15514 142 aaKnown RBP18.7■□□□□ 0.58
CIITA-206ENST00000571190 CASP4P49662 377 aa18.7■□□□□ 0.58
CIITA-206ENST00000571190 PDE6CP51160 858 aa18.7■□□□□ 0.58
CIITA-206ENST00000571190 SNRPFP62306 86 aaKnown RBP18.7■□□□□ 0.58
CIITA-206ENST00000571190 TAF10Q12962 218 aa18.7■□□□□ 0.58
CIITA-206ENST00000571190 FOXD4L5Q5VV16 416 aaPredicted RBP18.7■□□□□ 0.58
CIITA-206ENST00000571190 TCEAL6Q6IPX3 200 aa18.7■□□□□ 0.58
CIITA-206ENST00000571190 FILIP1Q7Z7B0 1213 aa18.7■□□□□ 0.58
CIITA-206ENST00000571190 SFTPA1Q8IWL2 248 aa18.7■□□□□ 0.58
CIITA-206ENST00000571190 C12orf56Q8IXR9 622 aa18.7■□□□□ 0.58
CIITA-206ENST00000571190 C12orf50Q8NA57 414 aaPredicted RBP18.7■□□□□ 0.58
CIITA-206ENST00000571190 FOXD4L4Q8WXT5 416 aaPredicted RBP18.7■□□□□ 0.58
CIITA-206ENST00000571190 TCEAL3Q969E4 200 aa18.7■□□□□ 0.58
CIITA-206ENST00000571190 ACDQ96AP0 544 aa18.7■□□□□ 0.58
CIITA-206ENST00000571190 SLC39A2Q9NP94 309 aa18.7■□□□□ 0.58
CIITA-206ENST00000571190 SMPD4Q9NXE4 827 aa18.7■□□□□ 0.58
CIITA-206ENST00000571190 UBE4BO95155 1302 aa18.7■□□□□ 0.58
CIITA-206ENST00000571190 KRT37O76014 449 aa18.69■□□□□ 0.58
CIITA-206ENST00000571190 HNRNPLP14866 589 aaKnown RBP eCLIP18.69■□□□□ 0.58
CIITA-206ENST00000571190 SLC6A11P48066 632 aa18.69■□□□□ 0.58
CIITA-206ENST00000571190 PPP3CCP48454 512 aa18.69■□□□□ 0.58
CIITA-206ENST00000571190 CDH8P55286 799 aa18.69■□□□□ 0.58
CIITA-206ENST00000571190 TNNC1P63316 161 aa18.69■□□□□ 0.58
CIITA-206ENST00000571190 CUL4BQ13620 913 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 168.7 ms