RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 LRRIQ3A6PVS8 624 aaPredicted RBP13.19□□□□□ -0.3
CTDNEP1-205ENST00000570828 PDXKO00764 312 aa13.19□□□□□ -0.3
CTDNEP1-205ENST00000570828 TRIM66O15016 1216 aa13.19□□□□□ -0.3
CTDNEP1-205ENST00000570828 TADA3O75528 432 aa13.19□□□□□ -0.3
CTDNEP1-205ENST00000570828 NR3C1P04150 777 aa13.19□□□□□ -0.3
CTDNEP1-205ENST00000570828 CKMP06732 381 aa13.19□□□□□ -0.3
CTDNEP1-205ENST00000570828 FAM163BP0C2L3 166 aa13.19□□□□□ -0.3
CTDNEP1-205ENST00000570828 TNK2Q07912 1038 aa13.19□□□□□ -0.3
CTDNEP1-205ENST00000570828 NCOA4Q13772 614 aa13.19□□□□□ -0.3
CTDNEP1-205ENST00000570828 BECN1Q14457 450 aa13.19□□□□□ -0.3
CTDNEP1-205ENST00000570828 ITPRIPL2Q3MIP1 535 aa13.19□□□□□ -0.3
CTDNEP1-205ENST00000570828 TDRD10Q5VZ19 366 aaKnown RBP13.19□□□□□ -0.3
CTDNEP1-205ENST00000570828 CC2D1AQ6P1N0 951 aaPredicted RBP13.19□□□□□ -0.3
CTDNEP1-205ENST00000570828 MYCBPAPQ8TBZ2 947 aa13.19□□□□□ -0.3
CTDNEP1-205ENST00000570828 PLEKHO2Q8TD55 490 aa13.19□□□□□ -0.3
CTDNEP1-205ENST00000570828 KCNV2Q8TDN2 545 aa13.19□□□□□ -0.3
CTDNEP1-205ENST00000570828 PARD3BQ8TEW8 1205 aa13.19□□□□□ -0.3
CTDNEP1-205ENST00000570828 ATRIPQ8WXE1 791 aa13.19□□□□□ -0.3
CTDNEP1-205ENST00000570828 ZNF516Q92618 1163 aa13.19□□□□□ -0.3
CTDNEP1-205ENST00000570828 USP13Q92995 863 aaPredicted RBP13.19□□□□□ -0.3
CTDNEP1-205ENST00000570828 CCDC34Q96HJ3 373 aa13.19□□□□□ -0.3
CTDNEP1-205ENST00000570828 PCED1BQ96HM7 432 aa13.19□□□□□ -0.3
CTDNEP1-205ENST00000570828 CEP295NLQ96MC4 621 aa13.19□□□□□ -0.3
CTDNEP1-205ENST00000570828 HINFPQ9BQA5 517 aa13.19□□□□□ -0.3
CTDNEP1-205ENST00000570828 XYLT2Q9H1B5 865 aa13.19□□□□□ -0.3
CTDNEP1-205ENST00000570828 KCTD10Q9H3F6 313 aa13.19□□□□□ -0.3
CTDNEP1-205ENST00000570828 DMAC2Q9NW81 257 aa13.19□□□□□ -0.3
CTDNEP1-205ENST00000570828 ZSCAN32Q9NX65 697 aa13.19□□□□□ -0.3
CTDNEP1-205ENST00000570828 EHD2Q9NZN4 543 aa13.19□□□□□ -0.3
CTDNEP1-205ENST00000570828 CCL26Q9Y258 94 aa13.19□□□□□ -0.3
CTDNEP1-205ENST00000570828 PCDHGA2Q9Y5H1 932 aa13.19□□□□□ -0.3
CTDNEP1-205ENST00000570828 FRYLO94915 3013 aa13.19□□□□□ -0.3
CTDNEP1-205ENST00000570828 TCHHQ07283 1943 aa13.19□□□□□ -0.3
CTDNEP1-205ENST00000570828 MIA3Q5JRA6 1907 aa13.18□□□□□ -0.3
CTDNEP1-205ENST00000570828 A8MXQ7 604 aa13.18□□□□□ -0.3
CTDNEP1-205ENST00000570828 CALUO43852 315 aaPredicted RBP13.18□□□□□ -0.3
CTDNEP1-205ENST00000570828 CHRNB1P11230 501 aa13.18□□□□□ -0.3
CTDNEP1-205ENST00000570828 CCR3P51677 355 aa13.18□□□□□ -0.3
CTDNEP1-205ENST00000570828 ZNF268Q14587 947 aaPredicted RBP13.18□□□□□ -0.3
CTDNEP1-205ENST00000570828 KCNB1Q14721 858 aa13.18□□□□□ -0.3
CTDNEP1-205ENST00000570828 ZNF667Q5HYK9 610 aa13.18□□□□□ -0.3
CTDNEP1-205ENST00000570828 CEP135Q66GS9 1140 aa13.18□□□□□ -0.3
CTDNEP1-205ENST00000570828 TXNDC11Q6PKC3 985 aa13.18□□□□□ -0.3
CTDNEP1-205ENST00000570828 TSSK4Q6SA08 328 aa13.18□□□□□ -0.3
CTDNEP1-205ENST00000570828 SCARA5Q6ZMJ2 495 aa13.18□□□□□ -0.3
CTDNEP1-205ENST00000570828 KRBA2Q6ZNG9 492 aa13.18□□□□□ -0.3
CTDNEP1-205ENST00000570828 DENND5BQ6ZUT9 1274 aa13.18□□□□□ -0.3
CTDNEP1-205ENST00000570828 TTC16Q8NEE8 873 aa13.18□□□□□ -0.3
CTDNEP1-205ENST00000570828 TMEM174Q8WUU8 243 aa13.18□□□□□ -0.3
CTDNEP1-205ENST00000570828 SPATA17Q96L03 361 aa13.18□□□□□ -0.3
CTDNEP1-205ENST00000570828 FAM126AQ9BYI3 521 aaPredicted RBP13.18□□□□□ -0.3
CTDNEP1-205ENST00000570828 ELOVL4Q9GZR5 314 aa13.18□□□□□ -0.3
CTDNEP1-205ENST00000570828 VRTNQ9H8Y1 702 aa13.18□□□□□ -0.3
CTDNEP1-205ENST00000570828 GKN1Q9NS71 199 aa13.18□□□□□ -0.3
CTDNEP1-205ENST00000570828 FRMD4BQ9Y2L6 1034 aa13.18□□□□□ -0.3
CTDNEP1-205ENST00000570828 COL4A2P08572 1712 aa13.18□□□□□ -0.3
CTDNEP1-205ENST00000570828 EP300Q09472 2414 aaPredicted RBP13.17□□□□□ -0.3
CTDNEP1-205ENST00000570828 F8VP50 259 aa13.17□□□□□ -0.3
CTDNEP1-205ENST00000570828 RHOBTB3O94955 611 aa13.17□□□□□ -0.3
CTDNEP1-205ENST00000570828 USP17L7P0C7H9 530 aa13.17□□□□□ -0.3
CTDNEP1-205ENST00000570828 P4HA1P13674 534 aa13.17□□□□□ -0.3
CTDNEP1-205ENST00000570828 PTPN1P18031 435 aaKnown RBP13.17□□□□□ -0.3
CTDNEP1-205ENST00000570828 PDE6CP51160 858 aa13.17□□□□□ -0.3
CTDNEP1-205ENST00000570828 CLDN10P78369 228 aa13.17□□□□□ -0.3
CTDNEP1-205ENST00000570828 FAM160A1Q05DH4 1040 aa13.17□□□□□ -0.3
CTDNEP1-205ENST00000570828 DPYDQ12882 1025 aa13.17□□□□□ -0.3
CTDNEP1-205ENST00000570828 MTF1Q14872 753 aa13.17□□□□□ -0.3
CTDNEP1-205ENST00000570828 PON2Q15165 354 aa13.17□□□□□ -0.3
CTDNEP1-205ENST00000570828 DGKKQ5KSL6 1271 aa13.17□□□□□ -0.3
CTDNEP1-205ENST00000570828 B3GALNT2Q8NCR0 500 aa13.17□□□□□ -0.3
CTDNEP1-205ENST00000570828 FAM83CQ9BQN1 747 aa13.17□□□□□ -0.3
CTDNEP1-205ENST00000570828 GOLPH3LQ9H4A5 285 aa13.17□□□□□ -0.3
CTDNEP1-205ENST00000570828 DPEP3Q9H4B8 488 aa13.17□□□□□ -0.3
CTDNEP1-205ENST00000570828 EBF3Q9H4W6 596 aa13.17□□□□□ -0.3
CTDNEP1-205ENST00000570828 SMYD3Q9H7B4 428 aa13.17□□□□□ -0.3
CTDNEP1-205ENST00000570828 GDPD2Q9HCC8 539 aa13.17□□□□□ -0.3
CTDNEP1-205ENST00000570828 RBM12Q9NTZ6 932 aaKnown RBP13.17□□□□□ -0.3
CTDNEP1-205ENST00000570828 ATP8B3O60423 1300 aa13.16□□□□□ -0.3
CTDNEP1-205ENST00000570828 TICRRQ7Z2Z1 1910 aa13.16□□□□□ -0.3
CTDNEP1-205ENST00000570828 C4BPAP04003 597 aaKnown RBP13.16□□□□□ -0.3
CTDNEP1-205ENST00000570828 NR2F2P24468 414 aa13.16□□□□□ -0.3
CTDNEP1-205ENST00000570828 PIK3CAP42336 1068 aa13.16□□□□□ -0.3
CTDNEP1-205ENST00000570828 NRLP54845 237 aa13.16□□□□□ -0.3
CTDNEP1-205ENST00000570828 DLG4P78352 724 aa13.16□□□□□ -0.3
CTDNEP1-205ENST00000570828 AMPD2Q01433 879 aa13.16□□□□□ -0.3
CTDNEP1-205ENST00000570828 RUNX3Q13761 415 aa13.16□□□□□ -0.3
CTDNEP1-205ENST00000570828 PDGFRLQ15198 375 aa13.16□□□□□ -0.3
CTDNEP1-205ENST00000570828 TRIM68Q6AZZ1 485 aa13.16□□□□□ -0.3
CTDNEP1-205ENST00000570828 SPEM1Q8N4L4 309 aa13.16□□□□□ -0.3
CTDNEP1-205ENST00000570828 ZBTB44Q8NCP5 570 aa13.16□□□□□ -0.3
CTDNEP1-205ENST00000570828 RUBCNQ92622 972 aa13.16□□□□□ -0.3
CTDNEP1-205ENST00000570828 TNIP3Q96KP6 325 aa13.16□□□□□ -0.3
CTDNEP1-205ENST00000570828 C8orf48Q96LL4 319 aa13.16□□□□□ -0.3
CTDNEP1-205ENST00000570828 ZNF518BQ9C0D4 1074 aa13.16□□□□□ -0.3
CTDNEP1-205ENST00000570828 ZMYND15Q9H091 742 aa13.16□□□□□ -0.3
CTDNEP1-205ENST00000570828 HPS4Q9NQG7 708 aa13.16□□□□□ -0.3
CTDNEP1-205ENST00000570828 TRPM5Q9NZQ8 1165 aa13.16□□□□□ -0.3
CTDNEP1-205ENST00000570828 MAPK8IP1Q9UQF2 711 aa13.16□□□□□ -0.3
CTDNEP1-205ENST00000570828 TRAF3IP3Q9Y228 551 aa13.16□□□□□ -0.3
CTDNEP1-205ENST00000570828 NME7Q9Y5B8 376 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms