RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 CCL26Q9Y258 94 aa16.12■□□□□ 0.17
RAB40B-203ENST00000570676 FAM186AA6NE01 2351 aa16.11■□□□□ 0.17
RAB40B-203ENST00000570676 NCAM2O15394 837 aa16.11■□□□□ 0.17
RAB40B-203ENST00000570676 LAMTOR5O43504 91 aa16.11■□□□□ 0.17
RAB40B-203ENST00000570676 DDX6P26196 483 aaKnown RBP eCLIP16.11■□□□□ 0.17
RAB40B-203ENST00000570676 MYL6P60660 151 aa16.11■□□□□ 0.17
RAB40B-203ENST00000570676 CLDN10P78369 228 aa16.11■□□□□ 0.17
RAB40B-203ENST00000570676 ZNF528Q3MIS6 628 aa16.11■□□□□ 0.17
RAB40B-203ENST00000570676 HSP90AA4PQ58FG1 418 aa16.11■□□□□ 0.17
RAB40B-203ENST00000570676 TDRD10Q5VZ19 366 aaKnown RBP16.11■□□□□ 0.17
RAB40B-203ENST00000570676 CEP135Q66GS9 1140 aa16.11■□□□□ 0.17
RAB40B-203ENST00000570676 TXNDC8Q6A555 127 aa16.11■□□□□ 0.17
RAB40B-203ENST00000570676 TXNDC11Q6PKC3 985 aa16.11■□□□□ 0.17
RAB40B-203ENST00000570676 C4orf50Q6ZRC1 276 aa16.11■□□□□ 0.17
RAB40B-203ENST00000570676 CELF5Q8N6W0 485 aaKnown RBP16.11■□□□□ 0.17
RAB40B-203ENST00000570676 MAB21L3Q8N8X9 362 aa16.11■□□□□ 0.17
RAB40B-203ENST00000570676 CSGALNACT1Q8TDX6 532 aa16.11■□□□□ 0.17
RAB40B-203ENST00000570676 PARD3BQ8TEW8 1205 aa16.11■□□□□ 0.17
RAB40B-203ENST00000570676 USP13Q92995 863 aaPredicted RBP16.11■□□□□ 0.17
RAB40B-203ENST00000570676 MSANTD3Q96H12 275 aa16.11■□□□□ 0.17
RAB40B-203ENST00000570676 PCED1BQ96HM7 432 aa16.11■□□□□ 0.17
RAB40B-203ENST00000570676 MMS19Q96T76 1030 aa16.11■□□□□ 0.17
RAB40B-203ENST00000570676 GTSE1Q9NYZ3 720 aa16.11■□□□□ 0.17
RAB40B-203ENST00000570676 UXTQ9UBK9 157 aaPredicted RBP16.11■□□□□ 0.17
RAB40B-203ENST00000570676 MYO16Q9Y6X6 1858 aa16.11■□□□□ 0.17
RAB40B-203ENST00000570676 ZFHX2Q9C0A1 2572 aaPredicted RBP16.11■□□□□ 0.17
RAB40B-203ENST00000570676 SOBPA7XYQ1 873 aa16.1■□□□□ 0.17
RAB40B-203ENST00000570676 CHRNB1P11230 501 aa16.1■□□□□ 0.17
RAB40B-203ENST00000570676 ATICP31939 592 aa16.1■□□□□ 0.17
RAB40B-203ENST00000570676 CTHP32929 405 aa16.1■□□□□ 0.17
RAB40B-203ENST00000570676 TNK2Q07912 1038 aa16.1■□□□□ 0.17
RAB40B-203ENST00000570676 MTAPQ13126 283 aa16.1■□□□□ 0.17
RAB40B-203ENST00000570676 WDR72Q3MJ13 1102 aa16.1■□□□□ 0.17
RAB40B-203ENST00000570676 ZC3H14Q6PJT7 736 aaKnown RBP16.1■□□□□ 0.17
RAB40B-203ENST00000570676 FILIP1Q7Z7B0 1213 aa16.1■□□□□ 0.17
RAB40B-203ENST00000570676 MON1AQ86VX9 555 aa16.1■□□□□ 0.17
RAB40B-203ENST00000570676 FAM114A1Q8IWE2 563 aa16.1■□□□□ 0.17
RAB40B-203ENST00000570676 SCN4BQ8IWT1 228 aa16.1■□□□□ 0.17
RAB40B-203ENST00000570676 MRPS31Q92665 395 aaKnown RBP16.1■□□□□ 0.17
RAB40B-203ENST00000570676 NELL1Q92832 810 aa16.1■□□□□ 0.17
RAB40B-203ENST00000570676 IER2Q9BTL4 223 aa16.1■□□□□ 0.17
RAB40B-203ENST00000570676 HSD3B7Q9H2F3 369 aa16.1■□□□□ 0.17
RAB40B-203ENST00000570676 SEMA4AQ9H3S1 761 aa16.1■□□□□ 0.17
RAB40B-203ENST00000570676 DPEP3Q9H4B8 488 aa16.1■□□□□ 0.17
RAB40B-203ENST00000570676 C8orf33Q9H7E9 229 aaPredicted RBP16.1■□□□□ 0.17
RAB40B-203ENST00000570676 VRTNQ9H8Y1 702 aa16.1■□□□□ 0.17
RAB40B-203ENST00000570676 KIF9Q9HAQ2 790 aa16.1■□□□□ 0.17
RAB40B-203ENST00000570676 MAGEC2Q9UBF1 373 aaPredicted RBP16.1■□□□□ 0.17
RAB40B-203ENST00000570676 FRMD4BQ9Y2L6 1034 aa16.1■□□□□ 0.17
RAB40B-203ENST00000570676 SPECC1L-ADORA2AF8WAN1 911 aa16.09■□□□□ 0.17
RAB40B-203ENST00000570676 SLC16A3O15427 465 aaKnown RBP16.09■□□□□ 0.17
RAB40B-203ENST00000570676 AKAP3O75969 853 aa16.09■□□□□ 0.17
RAB40B-203ENST00000570676 VNN1O95497 513 aa16.09■□□□□ 0.17
RAB40B-203ENST00000570676 C4BPAP04003 597 aaKnown RBP16.09■□□□□ 0.17
RAB40B-203ENST00000570676 PDGFRBP09619 1106 aa16.09■□□□□ 0.17
RAB40B-203ENST00000570676 FAM163BP0C2L3 166 aa16.09■□□□□ 0.17
RAB40B-203ENST00000570676 EPB41P11171 864 aaKnown RBP16.09■□□□□ 0.17
RAB40B-203ENST00000570676 TDGF1P13385 188 aa16.09■□□□□ 0.17
RAB40B-203ENST00000570676 PSMC2P35998 433 aaKnown RBP16.09■□□□□ 0.17
RAB40B-203ENST00000570676 AVPR1AP37288 418 aa16.09■□□□□ 0.17
RAB40B-203ENST00000570676 TNNC1P63316 161 aa16.09■□□□□ 0.17
RAB40B-203ENST00000570676 DLG4P78352 724 aa16.09■□□□□ 0.17
RAB40B-203ENST00000570676 PLCB2Q00722 1185 aa16.09■□□□□ 0.17
RAB40B-203ENST00000570676 USP4Q13107 963 aa16.09■□□□□ 0.17
RAB40B-203ENST00000570676 TRPC3Q13507 836 aa16.09■□□□□ 0.17
RAB40B-203ENST00000570676 ZNF268Q14587 947 aaPredicted RBP16.09■□□□□ 0.17
RAB40B-203ENST00000570676 MAPRE1Q15691 268 aaKnown RBP16.09■□□□□ 0.17
RAB40B-203ENST00000570676 CCDC40Q4G0X9 1142 aa16.09■□□□□ 0.17
RAB40B-203ENST00000570676 MDH1BQ5I0G3 518 aa16.09■□□□□ 0.17
RAB40B-203ENST00000570676 CDKAL1Q5VV42 579 aa16.09■□□□□ 0.17
RAB40B-203ENST00000570676 VSTM1Q6UX27 236 aa16.09■□□□□ 0.17
RAB40B-203ENST00000570676 IRF2BP1Q8IU81 584 aa16.09■□□□□ 0.17
RAB40B-203ENST00000570676 CREBRFQ8IUR6 639 aa16.09■□□□□ 0.17
RAB40B-203ENST00000570676 TTC8Q8TAM2 541 aa16.09■□□□□ 0.17
RAB40B-203ENST00000570676 MYCBPAPQ8TBZ2 947 aa16.09■□□□□ 0.17
RAB40B-203ENST00000570676 SPATA17Q96L03 361 aa16.09■□□□□ 0.17
RAB40B-203ENST00000570676 CNOT6LQ96LI5 555 aaKnown RBP16.09■□□□□ 0.17
RAB40B-203ENST00000570676 HPS4Q9NQG7 708 aa16.09■□□□□ 0.17
RAB40B-203ENST00000570676 TMEM30AQ9NV96 361 aa16.09■□□□□ 0.17
RAB40B-203ENST00000570676 GOLGA6L3A6NEY3 463 aa16.08■□□□□ 0.16
RAB40B-203ENST00000570676 KCNJ18B7U540 433 aa16.08■□□□□ 0.16
RAB40B-203ENST00000570676 GNA14O95837 355 aa16.08■□□□□ 0.16
RAB40B-203ENST00000570676 LMNAP02545 664 aaKnown RBP16.08■□□□□ 0.16
RAB40B-203ENST00000570676 ZNF18P17022 549 aa16.08■□□□□ 0.16
RAB40B-203ENST00000570676 CDK11BP21127 795 aaKnown RBP16.08■□□□□ 0.16
RAB40B-203ENST00000570676 BDNFP23560 247 aa16.08■□□□□ 0.16
RAB40B-203ENST00000570676 GNL1P36915 607 aaPredicted RBP16.08■□□□□ 0.16
RAB40B-203ENST00000570676 KPNA1P52294 538 aaPredicted RBP16.08■□□□□ 0.16
RAB40B-203ENST00000570676 AP3M2P53677 418 aa16.08■□□□□ 0.16
RAB40B-203ENST00000570676 CYP27A1Q02318 531 aa16.08■□□□□ 0.16
RAB40B-203ENST00000570676 CSTF1Q05048 431 aaKnown RBP16.08■□□□□ 0.16
RAB40B-203ENST00000570676 BIRC3Q13489 604 aa16.08■□□□□ 0.16
RAB40B-203ENST00000570676 GAS6Q14393 721 aa16.08■□□□□ 0.16
RAB40B-203ENST00000570676 KCNJ12Q14500 433 aa16.08■□□□□ 0.16
RAB40B-203ENST00000570676 ZNF699Q32M78 642 aa16.08■□□□□ 0.16
RAB40B-203ENST00000570676 C1orf228Q6PIY5 440 aa16.08■□□□□ 0.16
RAB40B-203ENST00000570676 TSSK4Q6SA08 328 aa16.08■□□□□ 0.16
RAB40B-203ENST00000570676 MAMSTRQ6ZN01 415 aa16.08■□□□□ 0.16
RAB40B-203ENST00000570676 RALGPS2Q86X27 583 aaPredicted RBP16.08■□□□□ 0.16
RAB40B-203ENST00000570676 FAM186BQ8IYM0 893 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms