RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 LVRNQ6Q4G3 990 aa7.9□□□□□ -1.14
CNOT1-222ENST00000570139 SYDE1Q6ZW31 735 aaPredicted RBP7.9□□□□□ -1.14
CNOT1-222ENST00000570139 HEATR3Q7Z4Q2 680 aa7.9□□□□□ -1.14
CNOT1-222ENST00000570139 APOBEC3FQ8IUX4 373 aaKnown RBP7.9□□□□□ -1.14
CNOT1-222ENST00000570139 LILRA2Q8N149 483 aa7.9□□□□□ -1.14
CNOT1-222ENST00000570139 OR2I1PQ8NGU4 316 aa7.9□□□□□ -1.14
CNOT1-222ENST00000570139 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.9□□□□□ -1.145e-7■■■■■ 31.7
CNOT1-222ENST00000570139 TSPAN17Q96FV3 270 aa7.9□□□□□ -1.14
CNOT1-222ENST00000570139 CLPTM1LQ96KA5 538 aa7.9□□□□□ -1.14
CNOT1-222ENST00000570139 MSLNLQ96KJ4 702 aa7.9□□□□□ -1.14
CNOT1-222ENST00000570139 PRMT6Q96LA8 375 aaPredicted RBP7.9□□□□□ -1.14
CNOT1-222ENST00000570139 SAMD11Q96NU1 681 aa7.9□□□□□ -1.14
CNOT1-222ENST00000570139 PAGR1Q9BTK6 254 aa7.9□□□□□ -1.14
CNOT1-222ENST00000570139 TTLL2Q9BWV7 592 aa7.9□□□□□ -1.14
CNOT1-222ENST00000570139 AMNQ9BXJ7 453 aa7.9□□□□□ -1.14
CNOT1-222ENST00000570139 RNF26Q9BY78 433 aaPredicted RBP7.9□□□□□ -1.14
CNOT1-222ENST00000570139 TDRD3Q9H7E2 651 aaKnown RBP7.9□□□□□ -1.14
CNOT1-222ENST00000570139 SLC39A2Q9NP94 309 aa7.9□□□□□ -1.14
CNOT1-222ENST00000570139 PNPOQ9NVS9 261 aa7.9□□□□□ -1.14
CNOT1-222ENST00000570139 ZNF70Q9UC06 446 aaPredicted RBP7.9□□□□□ -1.14
CNOT1-222ENST00000570139 FEZ2Q9UHY8 353 aaPredicted RBP7.9□□□□□ -1.14
CNOT1-222ENST00000570139 GPR52Q9Y2T5 361 aa7.9□□□□□ -1.14
CNOT1-222ENST00000570139 RPTORQ8N122 1335 aa7.89□□□□□ -1.15
CNOT1-222ENST00000570139 IGKV6D-41A0A0C4DH26 115 aa7.89□□□□□ -1.15
CNOT1-222ENST00000570139 ZC3H12DA2A288 527 aaKnown RBP7.89□□□□□ -1.15
CNOT1-222ENST00000570139 VPS37CA5D8V6 355 aaPredicted RBP7.89□□□□□ -1.15
CNOT1-222ENST00000570139 WNT10BO00744 389 aa7.89□□□□□ -1.15
CNOT1-222ENST00000570139 APOL1O14791 398 aa7.89□□□□□ -1.15
CNOT1-222ENST00000570139 PHF2O75151 1096 aa7.89□□□□□ -1.15
CNOT1-222ENST00000570139 DEXIO95424 95 aa7.89□□□□□ -1.15
CNOT1-222ENST00000570139 TTLL1O95922 423 aa7.89□□□□□ -1.15
CNOT1-222ENST00000570139 TYRP14679 529 aa7.89□□□□□ -1.15
CNOT1-222ENST00000570139 SMARCA1P28370 1054 aa7.89□□□□□ -1.15
CNOT1-222ENST00000570139 SHMT1P34896 483 aa7.89□□□□□ -1.15
CNOT1-222ENST00000570139 GMPSP49915 693 aaPredicted RBP7.89□□□□□ -1.15
CNOT1-222ENST00000570139 AKAP17AQ02040 695 aaKnown RBP7.89□□□□□ -1.15
CNOT1-222ENST00000570139 MGAT5Q09328 741 aa7.89□□□□□ -1.15
CNOT1-222ENST00000570139 PLS1Q14651 629 aa7.89□□□□□ -1.15
CNOT1-222ENST00000570139 RAB39AQ14964 217 aa7.89□□□□□ -1.15
CNOT1-222ENST00000570139 DGKDQ16760 1214 aa7.89□□□□□ -1.15
CNOT1-222ENST00000570139 CERKLQ49MI3 558 aaPredicted RBP7.89□□□□□ -1.15
CNOT1-222ENST00000570139 L1TD1Q5T7N2 865 aaKnown RBP7.89□□□□□ -1.15
CNOT1-222ENST00000570139 VASNQ6EMK4 673 aa7.89□□□□□ -1.15
CNOT1-222ENST00000570139 TMEM179Q6ZVK1 233 aa7.89□□□□□ -1.15
CNOT1-222ENST00000570139 NLRX1Q86UT6 975 aa7.89□□□□□ -1.15
CNOT1-222ENST00000570139 MIB1Q86YT6 1006 aa7.89□□□□□ -1.15
CNOT1-222ENST00000570139 ZDHHC13Q8IUH4 622 aa7.89□□□□□ -1.15
CNOT1-222ENST00000570139 LIX1LQ8IVB5 337 aa7.89□□□□□ -1.15
CNOT1-222ENST00000570139 ZSCAN18Q8TBC5 510 aaPredicted RBP7.89□□□□□ -1.15
CNOT1-222ENST00000570139 DDX11Q96FC9 970 aa7.89□□□□□ -1.15
CNOT1-222ENST00000570139 DYNLL2Q96FJ2 89 aa7.89□□□□□ -1.15
CNOT1-222ENST00000570139 RXFP1Q9HBX9 757 aa7.89□□□□□ -1.15
CNOT1-222ENST00000570139 SARS2Q9NP81 518 aaKnown RBP7.89□□□□□ -1.15
CNOT1-222ENST00000570139 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.89□□□□□ -1.15
CNOT1-222ENST00000570139 ORC3Q9UBD5 711 aaPredicted RBP7.89□□□□□ -1.15
CNOT1-222ENST00000570139 STX8Q9UNK0 236 aa7.89□□□□□ -1.15
CNOT1-222ENST00000570139 SLC4A7Q9Y6M7 1214 aa7.89□□□□□ -1.15
CNOT1-222ENST00000570139 MYH6P13533 1939 aa7.89□□□□□ -1.15
CNOT1-222ENST00000570139 MYH4Q9Y623 1939 aa7.88□□□□□ -1.15
CNOT1-222ENST00000570139 SCN4AP35499 1836 aa7.88□□□□□ -1.15
CNOT1-222ENST00000570139 hCG_1984214I3L0E3 225 aa7.88□□□□□ -1.15
CNOT1-222ENST00000570139 M0R3H8 397 aa7.88□□□□□ -1.15
CNOT1-222ENST00000570139 MYO1FO00160 1098 aa7.88□□□□□ -1.15
CNOT1-222ENST00000570139 AKR1B10O60218 316 aa7.88□□□□□ -1.15
CNOT1-222ENST00000570139 JAK2O60674 1132 aa7.88□□□□□ -1.15
CNOT1-222ENST00000570139 BAG4O95429 457 aaKnown RBP7.88□□□□□ -1.15
CNOT1-222ENST00000570139 CTDNEP1O95476 244 aa7.88□□□□□ -1.15
CNOT1-222ENST00000570139 AGR2O95994 175 aa7.88□□□□□ -1.15
CNOT1-222ENST00000570139 LRG1P02750 347 aa7.88□□□□□ -1.15
CNOT1-222ENST00000570139 ECHS1P30084 290 aa7.88□□□□□ -1.15
CNOT1-222ENST00000570139 PFKPQ01813 784 aa7.88□□□□□ -1.15
CNOT1-222ENST00000570139 PMS2P11Q13670 270 aa7.88□□□□□ -1.15
CNOT1-222ENST00000570139 GRM4Q14833 912 aa7.88□□□□□ -1.15
CNOT1-222ENST00000570139 SKIDA1Q1XH10 827 aa7.88□□□□□ -1.15
CNOT1-222ENST00000570139 ASPRV1Q53RT3 343 aa7.88□□□□□ -1.15
CNOT1-222ENST00000570139 FAM47AQ5JRC9 791 aa7.88□□□□□ -1.15
CNOT1-222ENST00000570139 FKBP15Q5T1M5 1219 aa7.88□□□□□ -1.15
CNOT1-222ENST00000570139 MZT2AQ6P582 158 aa7.88□□□□□ -1.15
CNOT1-222ENST00000570139 TEPPQ6URK8 271 aa7.88□□□□□ -1.15
CNOT1-222ENST00000570139 LRSAM1Q6UWE0 723 aa7.88□□□□□ -1.15
CNOT1-222ENST00000570139 TMTC3Q6ZXV5 915 aa7.88□□□□□ -1.15
CNOT1-222ENST00000570139 RSPH3Q86UC2 560 aa7.88□□□□□ -1.15
CNOT1-222ENST00000570139 FAM129CQ86XR2 697 aa7.88□□□□□ -1.15
CNOT1-222ENST00000570139 ZNF713Q8N859 430 aaPredicted RBP7.88□□□□□ -1.15
CNOT1-222ENST00000570139 NAXEQ8NCW5 288 aa7.88□□□□□ -1.15
CNOT1-222ENST00000570139 OR5AN1Q8NGI8 311 aa7.88□□□□□ -1.15
CNOT1-222ENST00000570139 NUP133Q8WUM0 1156 aa7.88□□□□□ -1.15
CNOT1-222ENST00000570139 TRAPPC12Q8WVT3 735 aa7.88□□□□□ -1.15
CNOT1-222ENST00000570139 C8orf76Q96K31 380 aa7.88□□□□□ -1.15
CNOT1-222ENST00000570139 HAPLN2Q9GZV7 340 aa7.88□□□□□ -1.15
CNOT1-222ENST00000570139 WDCPQ9H6R7 721 aa7.88□□□□□ -1.15
CNOT1-222ENST00000570139 SH2D4AQ9H788 454 aa7.88□□□□□ -1.15
CNOT1-222ENST00000570139 VEZTQ9HBM0 779 aa7.88□□□□□ -1.15
CNOT1-222ENST00000570139 IL17RBQ9NRM6 502 aa7.88□□□□□ -1.15
CNOT1-222ENST00000570139 MTMR4Q9NYA4 1195 aa7.88□□□□□ -1.15
CNOT1-222ENST00000570139 GPRC5DQ9NZD1 345 aa7.88□□□□□ -1.15
CNOT1-222ENST00000570139 CALCOCO1Q9P1Z2 691 aa7.88□□□□□ -1.15
CNOT1-222ENST00000570139 NYAP2Q9P242 653 aa7.88□□□□□ -1.15
CNOT1-222ENST00000570139 CNOT7Q9UIV1 285 aaKnown RBP7.88□□□□□ -1.15
CNOT1-222ENST00000570139 GPR160Q9UJ42 338 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms