RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 EDIL3O43854 480 aa7.2□□□□□ -1.26
HERPUD1-217ENST00000569429 MT-CO3P00414 261 aa7.2□□□□□ -1.26
HERPUD1-217ENST00000569429 NMT1P30419 496 aaKnown RBP7.2□□□□□ -1.26
HERPUD1-217ENST00000569429 NTSR1P30989 418 aa7.2□□□□□ -1.26
HERPUD1-217ENST00000569429 ARL2P36404 184 aa7.2□□□□□ -1.26
HERPUD1-217ENST00000569429 CASRP41180 1078 aa7.2□□□□□ -1.26
HERPUD1-217ENST00000569429 GRIA4P48058 902 aa7.2□□□□□ -1.26
HERPUD1-217ENST00000569429 TEAD4Q15561 434 aa7.2□□□□□ -1.26
HERPUD1-217ENST00000569429 TAF12Q16514 161 aa7.2□□□□□ -1.26
HERPUD1-217ENST00000569429 SKIDA1Q1XH10 827 aa7.2□□□□□ -1.26
HERPUD1-217ENST00000569429 ALKAL1Q6UXT8 129 aa7.2□□□□□ -1.26
HERPUD1-217ENST00000569429 KDM7AQ6ZMT4 941 aa7.2□□□□□ -1.26
HERPUD1-217ENST00000569429 ZC3H18Q86VM9 953 aaKnown RBP7.2□□□□□ -1.26
HERPUD1-217ENST00000569429 KIAA1958Q8N8K9 716 aa7.2□□□□□ -1.26
HERPUD1-217ENST00000569429 EXOC6Q8TAG9 804 aa7.2□□□□□ -1.26
HERPUD1-217ENST00000569429 ZNF564Q8TBZ8 553 aaPredicted RBP7.2□□□□□ -1.26
HERPUD1-217ENST00000569429 ASAP3Q8TDY4 903 aa7.2□□□□□ -1.26
HERPUD1-217ENST00000569429 GJA10Q969M2 543 aa7.2□□□□□ -1.26
HERPUD1-217ENST00000569429 TMEM87BQ96K49 555 aa7.2□□□□□ -1.26
HERPUD1-217ENST00000569429 MRGPRX1Q96LB2 322 aa7.2□□□□□ -1.26
HERPUD1-217ENST00000569429 FAM20AQ96MK3 541 aa7.2□□□□□ -1.26
HERPUD1-217ENST00000569429 CCNL2Q96S94 520 aaPredicted RBP7.2□□□□□ -1.26
HERPUD1-217ENST00000569429 GPR174Q9BXC1 333 aa7.2□□□□□ -1.26
HERPUD1-217ENST00000569429 ARHGEF4Q9NR80 690 aa7.2□□□□□ -1.26
HERPUD1-217ENST00000569429 GEMIN8Q9NWZ8 242 aaKnown RBP7.2□□□□□ -1.26
HERPUD1-217ENST00000569429 BARHL2Q9NY43 387 aa7.2□□□□□ -1.26
HERPUD1-217ENST00000569429 SCN1AP35498 2009 aa7.2□□□□□ -1.26
HERPUD1-217ENST00000569429 VPS37CA5D8V6 355 aaPredicted RBP7.19□□□□□ -1.26
HERPUD1-217ENST00000569429 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.19□□□□□ -1.26
HERPUD1-217ENST00000569429 M0QZQ0 153 aa7.19□□□□□ -1.26
HERPUD1-217ENST00000569429 LAD1O00515 517 aa7.19□□□□□ -1.26
HERPUD1-217ENST00000569429 KCNK3O14649 394 aa7.19□□□□□ -1.26
HERPUD1-217ENST00000569429 LARGE1O95461 756 aa7.19□□□□□ -1.26
HERPUD1-217ENST00000569429 CYP17A1P05093 508 aa7.19□□□□□ -1.26
HERPUD1-217ENST00000569429 USP17L7P0C7H9 530 aa7.19□□□□□ -1.26
HERPUD1-217ENST00000569429 HMGA1P17096 107 aaKnown RBP7.19□□□□□ -1.26
HERPUD1-217ENST00000569429 SDSP20132 328 aa7.19□□□□□ -1.26
HERPUD1-217ENST00000569429 GLRA2P23416 452 aa7.19□□□□□ -1.26
HERPUD1-217ENST00000569429 MCM4P33991 863 aa7.19□□□□□ -1.26
HERPUD1-217ENST00000569429 TNFSF9P41273 254 aa7.19□□□□□ -1.26
HERPUD1-217ENST00000569429 CTSKP43235 329 aa7.19□□□□□ -1.26
HERPUD1-217ENST00000569429 CD97P48960 835 aa7.19□□□□□ -1.26
HERPUD1-217ENST00000569429 ANTXR2P58335 489 aa7.19□□□□□ -1.26
HERPUD1-217ENST00000569429 E2F1Q01094 437 aa7.19□□□□□ -1.26
HERPUD1-217ENST00000569429 ST3GAL1Q11201 340 aa7.19□□□□□ -1.26
HERPUD1-217ENST00000569429 DCAF4L1Q3SXM0 396 aa7.19□□□□□ -1.26
HERPUD1-217ENST00000569429 OTUD6AQ7L8S5 288 aa7.19□□□□□ -1.26
HERPUD1-217ENST00000569429 KANSL1Q7Z3B3 1105 aa7.19□□□□□ -1.26
HERPUD1-217ENST00000569429 C4orf19Q8IY42 314 aa7.19□□□□□ -1.26
HERPUD1-217ENST00000569429 ADGRG2Q8IZP9 1017 aa7.19□□□□□ -1.26
HERPUD1-217ENST00000569429 PHTF2Q8N3S3 785 aa7.19□□□□□ -1.26
HERPUD1-217ENST00000569429 NCOA7Q8NI08 942 aa7.19□□□□□ -1.26
HERPUD1-217ENST00000569429 MOCOSQ96EN8 888 aa7.19□□□□□ -1.26
HERPUD1-217ENST00000569429 SGF29Q96ES7 293 aa7.19□□□□□ -1.26
HERPUD1-217ENST00000569429 MTA3Q9BTC8 594 aa7.19□□□□□ -1.26
HERPUD1-217ENST00000569429 PCED1AQ9H1Q7 454 aa7.19□□□□□ -1.26
HERPUD1-217ENST00000569429 USP36Q9P275 1121 aaKnown RBP7.19□□□□□ -1.26
HERPUD1-217ENST00000569429 ANAPC2Q9UJX6 822 aa7.19□□□□□ -1.26
HERPUD1-217ENST00000569429 HCN2Q9UL51 889 aa7.19□□□□□ -1.26
HERPUD1-217ENST00000569429 STARD13Q9Y3M8 1113 aa7.19□□□□□ -1.26
HERPUD1-217ENST00000569429 CNTNAP5Q8WYK1 1306 aa7.19□□□□□ -1.26
HERPUD1-217ENST00000569429 PLXNA2O75051 1894 aa7.19□□□□□ -1.26
HERPUD1-217ENST00000569429 SHANK1Q9Y566 2161 aa7.18□□□□□ -1.26
HERPUD1-217ENST00000569429 TRAV19A0A0A6YYK7 116 aa7.18□□□□□ -1.26
HERPUD1-217ENST00000569429 TTLL13PA6NNM8 815 aa7.18□□□□□ -1.26
HERPUD1-217ENST00000569429 AGFG2O95081 481 aa7.18□□□□□ -1.26
HERPUD1-217ENST00000569429 P4HBP07237 508 aaKnown RBP7.18□□□□□ -1.26
HERPUD1-217ENST00000569429 CKMT2P17540 419 aa7.18□□□□□ -1.26
HERPUD1-217ENST00000569429 RXRAP19793 462 aa7.18□□□□□ -1.26
HERPUD1-217ENST00000569429 ATP2B1P20020 1258 aa7.18□□□□□ -1.26
HERPUD1-217ENST00000569429 ACP1P24666 158 aa7.18□□□□□ -1.26
HERPUD1-217ENST00000569429 YWHABP31946 246 aaKnown RBP7.18□□□□□ -1.26
HERPUD1-217ENST00000569429 CDR1P51861 262 aa7.18□□□□□ -1.26
HERPUD1-217ENST00000569429 FOSBP53539 338 aa7.18□□□□□ -1.26
HERPUD1-217ENST00000569429 IL9RQ01113 521 aa7.18□□□□□ -1.26
HERPUD1-217ENST00000569429 RESTQ13127 1097 aa7.18□□□□□ -1.26
HERPUD1-217ENST00000569429 CLN3Q13286 438 aa7.18□□□□□ -1.26
HERPUD1-217ENST00000569429 ORC1Q13415 861 aa7.18□□□□□ -1.26
HERPUD1-217ENST00000569429 DHCR24Q15392 516 aa7.18□□□□□ -1.26
HERPUD1-217ENST00000569429 INF2Q27J81 1249 aa7.18□□□□□ -1.26
HERPUD1-217ENST00000569429 MGAT5BQ3V5L5 792 aa7.18□□□□□ -1.26
HERPUD1-217ENST00000569429 XKR9Q5GH70 373 aa7.18□□□□□ -1.26
HERPUD1-217ENST00000569429 USP53Q70EK8 1073 aa7.18□□□□□ -1.26
HERPUD1-217ENST00000569429 RALYLQ86SE5 291 aaKnown RBP7.18□□□□□ -1.26
HERPUD1-217ENST00000569429 C12orf40Q86WS4 652 aa7.18□□□□□ -1.26
HERPUD1-217ENST00000569429 GATAD2AQ86YP4 633 aa7.18□□□□□ -1.26
HERPUD1-217ENST00000569429 MIB1Q86YT6 1006 aa7.18□□□□□ -1.26
HERPUD1-217ENST00000569429 TMTC2Q8N394 836 aa7.18□□□□□ -1.26
HERPUD1-217ENST00000569429 KRI1Q8N9T8 703 aaKnown RBP7.18□□□□□ -1.26
HERPUD1-217ENST00000569429 SH3RF2Q8TEC5 729 aa7.18□□□□□ -1.26
HERPUD1-217ENST00000569429 GIPC2Q8TF65 315 aa7.18□□□□□ -1.26
HERPUD1-217ENST00000569429 SSC4DQ8WTU2 575 aa7.18□□□□□ -1.26
HERPUD1-217ENST00000569429 CCDC136Q96JN2 1154 aa7.18□□□□□ -1.26
HERPUD1-217ENST00000569429 ZMAT2Q96NC0 199 aaKnown RBP7.18□□□□□ -1.26
HERPUD1-217ENST00000569429 SLC22A12Q96S37 553 aa7.18□□□□□ -1.26
HERPUD1-217ENST00000569429 SEPT5Q99719 369 aaPredicted RBP7.18□□□□□ -1.26
HERPUD1-217ENST00000569429 GABRG3Q99928 467 aa7.18□□□□□ -1.26
HERPUD1-217ENST00000569429 ADNPQ9H2P0 1102 aa7.18□□□□□ -1.26
HERPUD1-217ENST00000569429 KDM4CQ9H3R0 1056 aa7.18□□□□□ -1.26
HERPUD1-217ENST00000569429 ITM2CQ9NQX7 267 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms