RNA–Protein interactions for RNA: ENST00000569263.1

CNOT1-217, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-217ENST00000569263 HS6ST3Q8IZP7 471 aa13.82□□□□□ -0.2
CNOT1-217ENST00000569263 ANKRD52Q8NB46 1076 aa13.82□□□□□ -0.2
CNOT1-217ENST00000569263 TFAP2BQ92481 460 aa13.82□□□□□ -0.2
CNOT1-217ENST00000569263 GCNAQ96QF7 691 aa13.82□□□□□ -0.2
CNOT1-217ENST00000569263 KCNK16Q96T55 309 aa13.82□□□□□ -0.2
CNOT1-217ENST00000569263 SMOQ99835 787 aa13.82□□□□□ -0.2
CNOT1-217ENST00000569263 TRIM5Q9C035 493 aa13.82□□□□□ -0.2
CNOT1-217ENST00000569263 GPR88Q9GZN0 384 aa13.82□□□□□ -0.2
CNOT1-217ENST00000569263 TMEM30AQ9NV96 361 aa13.82□□□□□ -0.2
CNOT1-217ENST00000569263 UXTQ9UBK9 157 aaPredicted RBP13.82□□□□□ -0.2
CNOT1-217ENST00000569263 MRPS23Q9Y3D9 190 aaKnown RBP13.82□□□□□ -0.2
CNOT1-217ENST00000569263 NOTCH4Q99466 2003 aa13.81□□□□□ -0.2
CNOT1-217ENST00000569263 ZNF197O14709 1029 aa13.81□□□□□ -0.2
CNOT1-217ENST00000569263 BEST1O76090 585 aa13.81□□□□□ -0.2
CNOT1-217ENST00000569263 GFPT2O94808 682 aa13.81□□□□□ -0.2
CNOT1-217ENST00000569263 MICAL2O94851 1124 aa13.81□□□□□ -0.2
CNOT1-217ENST00000569263 RTN3O95197 1032 aaPredicted RBP13.81□□□□□ -0.2
CNOT1-217ENST00000569263 FGF19O95750 216 aa13.81□□□□□ -0.2
CNOT1-217ENST00000569263 SETSIPP0DME0 302 aa13.81□□□□□ -0.2
CNOT1-217ENST00000569263 FSHRP23945 695 aa13.81□□□□□ -0.2
CNOT1-217ENST00000569263 SSTR3P32745 418 aaPredicted RBP13.81□□□□□ -0.2
CNOT1-217ENST00000569263 SOX5P35711 763 aa13.81□□□□□ -0.2
CNOT1-217ENST00000569263 JAM2P57087 298 aa13.81□□□□□ -0.2
CNOT1-217ENST00000569263 BST2Q10589 180 aaKnown RBP13.81□□□□□ -0.2
CNOT1-217ENST00000569263 MTMR3Q13615 1198 aa13.81□□□□□ -0.2
CNOT1-217ENST00000569263 CNGA2Q16280 664 aa13.81□□□□□ -0.2
CNOT1-217ENST00000569263 SARM1Q6SZW1 724 aa13.81□□□□□ -0.2
CNOT1-217ENST00000569263 LCLAT1Q6UWP7 414 aa13.81□□□□□ -0.2
CNOT1-217ENST00000569263 TTC30AQ86WT1 665 aa13.81□□□□□ -0.2
CNOT1-217ENST00000569263 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.81□□□□□ -0.2
CNOT1-217ENST00000569263 NUP93Q8N1F7 819 aa13.81□□□□□ -0.2
CNOT1-217ENST00000569263 ASB2Q96Q27 587 aa13.81□□□□□ -0.2
CNOT1-217ENST00000569263 NUP58Q9BVL2 599 aa13.81□□□□□ -0.2
CNOT1-217ENST00000569263 CSNK1G1Q9HCP0 422 aa13.81□□□□□ -0.2
CNOT1-217ENST00000569263 ACP6Q9NPH0 428 aa13.81□□□□□ -0.2
CNOT1-217ENST00000569263 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.81□□□□□ -0.2
CNOT1-217ENST00000569263 DENND4CQ5VZ89 1909 aa13.81□□□□□ -0.2
CNOT1-217ENST00000569263 TCF20Q9UGU0 1960 aaKnown RBP13.8□□□□□ -0.2
CNOT1-217ENST00000569263 SP100P23497 879 aaPredicted RBP13.8□□□□□ -0.2
CNOT1-217ENST00000569263 GABRR2P28476 465 aa13.8□□□□□ -0.2
CNOT1-217ENST00000569263 CDC25CP30307 473 aa13.8□□□□□ -0.2
CNOT1-217ENST00000569263 GBP2P32456 591 aaPredicted RBP13.8□□□□□ -0.2
CNOT1-217ENST00000569263 CLCN1P35523 988 aa13.8□□□□□ -0.2
CNOT1-217ENST00000569263 PBX1P40424 430 aa13.8□□□□□ -0.2
CNOT1-217ENST00000569263 SLC5A3P53794 718 aa13.8□□□□□ -0.2
CNOT1-217ENST00000569263 EPHA5P54756 1037 aa13.8□□□□□ -0.2
CNOT1-217ENST00000569263 SLC47A2Q86VL8 602 aa13.8□□□□□ -0.2
CNOT1-217ENST00000569263 TMC8Q8IU68 726 aa13.8□□□□□ -0.2
CNOT1-217ENST00000569263 GPIHBP1Q8IV16 184 aa13.8□□□□□ -0.2
CNOT1-217ENST00000569263 FMNL3Q8IVF7 1028 aa13.8□□□□□ -0.2
CNOT1-217ENST00000569263 ZMIZ2Q8NF64 920 aa13.8□□□□□ -0.2
CNOT1-217ENST00000569263 UBA3Q8TBC4 463 aa13.8□□□□□ -0.2
CNOT1-217ENST00000569263 ZNF606Q8WXB4 792 aa13.8□□□□□ -0.2
CNOT1-217ENST00000569263 IQCDQ96DY2 449 aa13.8□□□□□ -0.2
CNOT1-217ENST00000569263 TRMT2BQ96GJ1 504 aaKnown RBP13.8□□□□□ -0.2
CNOT1-217ENST00000569263 PHF7Q9BWX1 381 aaPredicted RBP13.8□□□□□ -0.2
CNOT1-217ENST00000569263 PDCL3Q9H2J4 239 aa13.8□□□□□ -0.2
CNOT1-217ENST00000569263 ZNF334Q9HCZ1 680 aaPredicted RBP13.8□□□□□ -0.2
CNOT1-217ENST00000569263 PNPLA8Q9NP80 782 aa13.8□□□□□ -0.2
CNOT1-217ENST00000569263 AVENQ9NQS1 362 aaPredicted RBP13.8□□□□□ -0.2
CNOT1-217ENST00000569263 NR2E1Q9Y466 385 aa13.8□□□□□ -0.2
CNOT1-217ENST00000569263 ITIH6Q6UXX5 1313 aa13.8□□□□□ -0.2
CNOT1-217ENST00000569263 COL6A3P12111 3177 aa13.8□□□□□ -0.2
CNOT1-217ENST00000569263 PRUNE2Q8WUY3 3088 aa13.79□□□□□ -0.2
CNOT1-217ENST00000569263 A0A1W2PRU2 124 aa13.79□□□□□ -0.2
CNOT1-217ENST00000569263 XPO1O14980 1071 aaKnown RBP13.79□□□□□ -0.2
CNOT1-217ENST00000569263 CCDC172P0C7W6 258 aa13.79□□□□□ -0.2
CNOT1-217ENST00000569263 CYP11B1P15538 503 aa13.79□□□□□ -0.2
CNOT1-217ENST00000569263 HMGA1P17096 107 aaKnown RBP13.79□□□□□ -0.2
CNOT1-217ENST00000569263 CEBPBP17676 345 aa13.79□□□□□ -0.2
CNOT1-217ENST00000569263 KRT9P35527 623 aa13.79□□□□□ -0.2
CNOT1-217ENST00000569263 ARID5AQ03989 594 aa13.79□□□□□ -0.2
CNOT1-217ENST00000569263 PDE4CQ08493 712 aa13.79□□□□□ -0.2
CNOT1-217ENST00000569263 MEA1Q16626 185 aa13.79□□□□□ -0.2
CNOT1-217ENST00000569263 SLC5A9Q2M3M2 681 aa13.79□□□□□ -0.2
CNOT1-217ENST00000569263 ARHGAP15Q53QZ3 475 aa13.79□□□□□ -0.2
CNOT1-217ENST00000569263 FIGNQ5HY92 759 aa13.79□□□□□ -0.2
CNOT1-217ENST00000569263 PRSS36Q5K4E3 855 aa13.79□□□□□ -0.2
CNOT1-217ENST00000569263 OTOP3Q7RTS5 596 aa13.79□□□□□ -0.2
CNOT1-217ENST00000569263 PIGZQ86VD9 579 aa13.79□□□□□ -0.2
CNOT1-217ENST00000569263 TDRD5Q8NAT2 981 aaKnown RBP13.79□□□□□ -0.2
CNOT1-217ENST00000569263 ZNF397Q8NF99 534 aaPredicted RBP13.79□□□□□ -0.2
CNOT1-217ENST00000569263 ING5Q8WYH8 240 aa13.79□□□□□ -0.2
CNOT1-217ENST00000569263 SECISBP2LQ93073 1101 aaKnown RBP13.79□□□□□ -0.2
CNOT1-217ENST00000569263 ACSF2Q96CM8 615 aaPredicted RBP13.79□□□□□ -0.2
CNOT1-217ENST00000569263 MYRFLQ96LU7 910 aa13.79□□□□□ -0.2
CNOT1-217ENST00000569263 SLITRK1Q96PX8 696 aa13.79□□□□□ -0.2
CNOT1-217ENST00000569263 ZSWIM1Q9BR11 485 aa13.79□□□□□ -0.2
CNOT1-217ENST00000569263 TTLL2Q9BWV7 592 aa13.79□□□□□ -0.2
CNOT1-217ENST00000569263 EDEM3Q9BZQ6 932 aa13.79□□□□□ -0.2
CNOT1-217ENST00000569263 ATXN3LQ9H3M9 355 aa13.79□□□□□ -0.2
CNOT1-217ENST00000569263 MYO6Q9UM54 1294 aa13.79□□□□□ -0.2
CNOT1-217ENST00000569263 CEP83Q9Y592 693 aa13.79□□□□□ -0.2
CNOT1-217ENST00000569263 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.79□□□□□ -0.26e-9■■□□□ 11.7
CNOT1-217ENST00000569263 LRRC53A6NM62 1247 aa13.78□□□□□ -0.2
CNOT1-217ENST00000569263 TPM1P09493 284 aa13.78□□□□□ -0.2
CNOT1-217ENST00000569263 FERP16591 822 aa13.78□□□□□ -0.2
CNOT1-217ENST00000569263 YWHAQP27348 245 aa13.78□□□□□ -0.2
CNOT1-217ENST00000569263 CCR2P41597 374 aa13.78□□□□□ -0.2
CNOT1-217ENST00000569263 PLA2G4AP47712 749 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms