RNA–Protein interactions for RNA: ENST00000568922.1

GGA2-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 2

Gene GGA2, Length 1,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-213ENST00000568922 CEP104O60308 925 aa13.27□□□□□ -0.29
GGA2-213ENST00000568922 AP1G2O75843 785 aa13.27□□□□□ -0.29
GGA2-213ENST00000568922 FGFR3P22607 806 aa13.27□□□□□ -0.29
GGA2-213ENST00000568922 PEX5P50542 639 aa13.27□□□□□ -0.29
GGA2-213ENST00000568922 DEFB103AP81534 67 aa13.27□□□□□ -0.29
GGA2-213ENST00000568922 ITIH3Q06033 890 aa13.27□□□□□ -0.29
GGA2-213ENST00000568922 ACAP1Q15027 740 aa13.27□□□□□ -0.29
GGA2-213ENST00000568922 CLUL1Q15846 466 aa13.27□□□□□ -0.29
GGA2-213ENST00000568922 VARS2Q5ST30 1063 aaKnown RBP13.27□□□□□ -0.29
GGA2-213ENST00000568922 OLFML1Q6UWY5 402 aa13.27□□□□□ -0.29
GGA2-213ENST00000568922 C4orf50Q6ZRC1 276 aa13.27□□□□□ -0.29
GGA2-213ENST00000568922 CMTR2Q8IYT2 770 aaKnown RBP13.27□□□□□ -0.29
GGA2-213ENST00000568922 DCP1BQ8IZD4 617 aaKnown RBP13.27□□□□□ -0.29
GGA2-213ENST00000568922 RASGEF1CQ8N431 466 aa13.27□□□□□ -0.29
GGA2-213ENST00000568922 LRRN4CLQ8ND94 238 aa13.27□□□□□ -0.29
GGA2-213ENST00000568922 JOSD2Q8TAC2 188 aa13.27□□□□□ -0.29
GGA2-213ENST00000568922 ACTRT1Q8TDG2 376 aa13.27□□□□□ -0.29
GGA2-213ENST00000568922 KRT35Q92764 455 aa13.27□□□□□ -0.29
GGA2-213ENST00000568922 GOLGA1Q92805 767 aa13.27□□□□□ -0.29
GGA2-213ENST00000568922 OXCT2Q9BYC2 517 aaPredicted RBP13.27□□□□□ -0.29
GGA2-213ENST00000568922 GPR62Q9BZJ7 368 aa13.27□□□□□ -0.29
GGA2-213ENST00000568922 ZCWPW1Q9H0M4 648 aa13.27□□□□□ -0.29
GGA2-213ENST00000568922 CSNK1G1Q9HCP0 422 aa13.27□□□□□ -0.29
GGA2-213ENST00000568922 TMEM59LQ9UK28 342 aa13.27□□□□□ -0.29
GGA2-213ENST00000568922 KIAA0100Q14667 2235 aaKnown RBP13.26□□□□□ -0.29
GGA2-213ENST00000568922 PTPRSQ13332 1948 aa13.26□□□□□ -0.29
GGA2-213ENST00000568922 PDE2AO00408 941 aaPredicted RBP13.26□□□□□ -0.29
GGA2-213ENST00000568922 PSTPIP1O43586 416 aa13.26□□□□□ -0.29
GGA2-213ENST00000568922 GABBR2O75899 941 aa13.26□□□□□ -0.29
GGA2-213ENST00000568922 BEST1O76090 585 aa13.26□□□□□ -0.29
GGA2-213ENST00000568922 LCP1P13796 627 aa13.26□□□□□ -0.29
GGA2-213ENST00000568922 PSMA2P25787 234 aa13.26□□□□□ -0.29
GGA2-213ENST00000568922 RWDD2BP57060 319 aa13.26□□□□□ -0.29
GGA2-213ENST00000568922 MAP3K7CLP57077 242 aa13.26□□□□□ -0.29
GGA2-213ENST00000568922 OGDHQ02218 1023 aa13.26□□□□□ -0.29
GGA2-213ENST00000568922 ZNF252P-AS1Q0IIN9 211 aa13.26□□□□□ -0.29
GGA2-213ENST00000568922 MRPL58Q14197 206 aaKnown RBP13.26□□□□□ -0.29
GGA2-213ENST00000568922 ZNF280DQ6N043 979 aa13.26□□□□□ -0.29
GGA2-213ENST00000568922 LRRTM3Q86VH5 581 aa13.26□□□□□ -0.29
GGA2-213ENST00000568922 CPNE8Q86YQ8 564 aa13.26□□□□□ -0.29
GGA2-213ENST00000568922 SCUBE3Q8IX30 993 aa13.26□□□□□ -0.29
GGA2-213ENST00000568922 RHOT1Q8IXI2 618 aa13.26□□□□□ -0.29
GGA2-213ENST00000568922 UBXN4Q92575 508 aa13.26□□□□□ -0.29
GGA2-213ENST00000568922 ALG3Q92685 438 aa13.26□□□□□ -0.29
GGA2-213ENST00000568922 MS4A14Q96JA4 679 aa13.26□□□□□ -0.29
GGA2-213ENST00000568922 TMEM209Q96SK2 561 aa13.26□□□□□ -0.29
GGA2-213ENST00000568922 SMOQ99835 787 aa13.26□□□□□ -0.29
GGA2-213ENST00000568922 PLVAPQ9BX97 442 aa13.26□□□□□ -0.29
GGA2-213ENST00000568922 RC3H2Q9HBD1 1191 aaKnown RBP13.26□□□□□ -0.29
GGA2-213ENST00000568922 LRRC4Q9HBW1 653 aa13.26□□□□□ -0.29
GGA2-213ENST00000568922 TTC7AQ9ULT0 858 aaPredicted RBP13.26□□□□□ -0.29
GGA2-213ENST00000568922 USTQ9Y2C2 406 aa13.26□□□□□ -0.29
GGA2-213ENST00000568922 OR6C75A6NL08 312 aa13.25□□□□□ -0.29
GGA2-213ENST00000568922 NT5C1B-RDH14C9J2C7 533 aa13.25□□□□□ -0.29
GGA2-213ENST00000568922 H7C4K7 107 aa13.25□□□□□ -0.29
GGA2-213ENST00000568922 PGRMC1O00264 195 aaKnown RBP13.25□□□□□ -0.29
GGA2-213ENST00000568922 FGBP02675 491 aa13.25□□□□□ -0.29
GGA2-213ENST00000568922 GPD1P21695 349 aa13.25□□□□□ -0.29
GGA2-213ENST00000568922 FPGSQ05932 587 aa13.25□□□□□ -0.29
GGA2-213ENST00000568922 NFE2Q16621 373 aaPredicted RBP13.25□□□□□ -0.29
GGA2-213ENST00000568922 CTXN3Q4LDR2 81 aa13.25□□□□□ -0.29
GGA2-213ENST00000568922 DCAF12L1Q5VU92 463 aa13.25□□□□□ -0.29
GGA2-213ENST00000568922 CC2D1AQ6P1N0 951 aaPredicted RBP13.25□□□□□ -0.29
GGA2-213ENST00000568922 RSRC2Q7L4I2 434 aaKnown RBP13.25□□□□□ -0.29
GGA2-213ENST00000568922 SLC26A9Q7LBE3 791 aa13.25□□□□□ -0.29
GGA2-213ENST00000568922 ARCQ7LC44 396 aa13.25□□□□□ -0.29
GGA2-213ENST00000568922 CEP57Q86XR8 500 aa13.25□□□□□ -0.29
GGA2-213ENST00000568922 SPATA2LQ8IUW3 424 aaPredicted RBP13.25□□□□□ -0.29
GGA2-213ENST00000568922 EMC1Q8N766 993 aa13.25□□□□□ -0.29
GGA2-213ENST00000568922 BADQ92934 168 aa13.25□□□□□ -0.29
GGA2-213ENST00000568922 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.25□□□□□ -0.293e-10■■■■□ 19.3
GGA2-213ENST00000568922 TMLHEQ9NVH6 421 aa13.25□□□□□ -0.29
GGA2-213ENST00000568922 PATJQ8NI35 1801 aa13.25□□□□□ -0.29
GGA2-213ENST00000568922 C2CD4BA6NLJ0 364 aa13.25□□□□□ -0.29
GGA2-213ENST00000568922 DPYSL4O14531 572 aa13.25□□□□□ -0.29
GGA2-213ENST00000568922 FBXO21O94952 628 aa13.25□□□□□ -0.29
GGA2-213ENST00000568922 DESP17661 470 aa13.25□□□□□ -0.29
GGA2-213ENST00000568922 BDNFP23560 247 aa13.25□□□□□ -0.29
GGA2-213ENST00000568922 MARCKSL1P49006 195 aa13.25□□□□□ -0.29
GGA2-213ENST00000568922 ZNF143P52747 638 aaPredicted RBP13.25□□□□□ -0.29
GGA2-213ENST00000568922 ADIGQ0VDE8 80 aa13.25□□□□□ -0.29
GGA2-213ENST00000568922 BTG3Q14201 252 aaPredicted RBP13.25□□□□□ -0.29
GGA2-213ENST00000568922 EFHC1Q5JVL4 640 aa13.25□□□□□ -0.29
GGA2-213ENST00000568922 SPOUT1Q5T280 376 aaKnown RBP13.25□□□□□ -0.29
GGA2-213ENST00000568922 SEL1L2Q5TEA6 688 aa13.25□□□□□ -0.29
GGA2-213ENST00000568922 LRRC38Q5VT99 294 aa13.25□□□□□ -0.29
GGA2-213ENST00000568922 ANKS3Q6ZW76 656 aa13.25□□□□□ -0.29
GGA2-213ENST00000568922 OTOP2Q7RTS6 562 aa13.25□□□□□ -0.29
GGA2-213ENST00000568922 SIX6OS1Q8N1H7 587 aa13.25□□□□□ -0.29
GGA2-213ENST00000568922 SPATA4Q8NEY3 305 aa13.25□□□□□ -0.29
GGA2-213ENST00000568922 RNPC3Q96LT9 517 aaKnown RBP13.25□□□□□ -0.29
GGA2-213ENST00000568922 NAP1L3Q99457 506 aaPredicted RBP13.25□□□□□ -0.29
GGA2-213ENST00000568922 CNPY3Q9BT09 278 aa13.25□□□□□ -0.29
GGA2-213ENST00000568922 PNPLA8Q9NP80 782 aa13.25□□□□□ -0.29
GGA2-213ENST00000568922 DMAP1Q9NPF5 467 aaPredicted RBP13.25□□□□□ -0.29
GGA2-213ENST00000568922 ASNSD1Q9NWL6 643 aa13.25□□□□□ -0.29
GGA2-213ENST00000568922 F8VP50 259 aa13.24□□□□□ -0.29
GGA2-213ENST00000568922 RNF8O76064 485 aa13.24□□□□□ -0.29
GGA2-213ENST00000568922 EFEMP2O95967 443 aa13.24□□□□□ -0.29
GGA2-213ENST00000568922 LAG3P18627 525 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms