RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 ITPR1Q14643 2758 aa15.92■□□□□ 0.14
USB1-214ENST00000568848 MYMKA6NI61 221 aa15.92■□□□□ 0.14
USB1-214ENST00000568848 HUS1O60921 280 aa15.92■□□□□ 0.14
USB1-214ENST00000568848 ABL1P00519 1130 aa15.92■□□□□ 0.14
USB1-214ENST00000568848 PDGFRBP09619 1106 aa15.92■□□□□ 0.14
USB1-214ENST00000568848 BDNFP23560 247 aa15.92■□□□□ 0.14
USB1-214ENST00000568848 RPL10AP62906 217 aaKnown RBP15.92■□□□□ 0.14
USB1-214ENST00000568848 KCNB1Q14721 858 aa15.92■□□□□ 0.14
USB1-214ENST00000568848 NFE2Q16621 373 aaPredicted RBP15.92■□□□□ 0.14
USB1-214ENST00000568848 SOWAHAQ2M3V2 549 aa15.92■□□□□ 0.14
USB1-214ENST00000568848 FBXO43Q4G163 708 aa15.92■□□□□ 0.14
USB1-214ENST00000568848 USP39Q53GS9 565 aaKnown RBP15.92■□□□□ 0.14
USB1-214ENST00000568848 TRIM61Q5EBN2 209 aa15.92■□□□□ 0.14
USB1-214ENST00000568848 BRSK2Q8IWQ3 736 aa15.92■□□□□ 0.14
USB1-214ENST00000568848 OR5B17Q8NGF7 314 aa15.92■□□□□ 0.14
USB1-214ENST00000568848 LEO1Q8WVC0 666 aaPredicted RBP15.92■□□□□ 0.14
USB1-214ENST00000568848 KBTBD7Q8WVZ9 684 aa15.92■□□□□ 0.14
USB1-214ENST00000568848 ZCCHC14Q8WYQ9 949 aaKnown RBP15.92■□□□□ 0.14
USB1-214ENST00000568848 LARP4BQ92615 738 aaKnown RBP15.92■□□□□ 0.14
USB1-214ENST00000568848 HPS3Q969F9 1004 aa15.92■□□□□ 0.14
USB1-214ENST00000568848 ELMO3Q96BJ8 720 aa15.92■□□□□ 0.14
USB1-214ENST00000568848 TRMT2BQ96GJ1 504 aaKnown RBP15.92■□□□□ 0.14
USB1-214ENST00000568848 CNOT6LQ96LI5 555 aaKnown RBP15.92■□□□□ 0.14
USB1-214ENST00000568848 MYRFLQ96LU7 910 aa15.92■□□□□ 0.14
USB1-214ENST00000568848 TSPAN18Q96SJ8 248 aa15.92■□□□□ 0.14
USB1-214ENST00000568848 ACBD6Q9BR61 282 aa15.92■□□□□ 0.14
USB1-214ENST00000568848 RBAKQ9NYW8 714 aaPredicted RBP15.92■□□□□ 0.14
USB1-214ENST00000568848 MMP17Q9ULZ9 603 aa15.92■□□□□ 0.14
USB1-214ENST00000568848 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.92■□□□□ 0.14
USB1-214ENST00000568848 PCNX2A6NKB5 2137 aa15.91■□□□□ 0.14
USB1-214ENST00000568848 H3BQV1 296 aa15.91■□□□□ 0.14
USB1-214ENST00000568848 TRIM24O15164 1050 aa15.91■□□□□ 0.14
USB1-214ENST00000568848 ADAM23O75077 832 aa15.91■□□□□ 0.14
USB1-214ENST00000568848 WASP42768 502 aa15.91■□□□□ 0.14
USB1-214ENST00000568848 AMPD2Q01433 879 aa15.91■□□□□ 0.14
USB1-214ENST00000568848 MYL7Q01449 175 aa15.91■□□□□ 0.14
USB1-214ENST00000568848 CRY1Q16526 586 aa15.91■□□□□ 0.14
USB1-214ENST00000568848 ARL6IP4Q66PJ3 421 aaKnown RBP15.91■□□□□ 0.14
USB1-214ENST00000568848 KDF1Q8NAX2 398 aaPredicted RBP15.91■□□□□ 0.14
USB1-214ENST00000568848 HMGB4Q8WW32 186 aa15.91■□□□□ 0.14
USB1-214ENST00000568848 WBP2Q969T9 261 aa15.91■□□□□ 0.14
USB1-214ENST00000568848 CLIC6Q96NY7 704 aa15.91■□□□□ 0.14
USB1-214ENST00000568848 SYT15Q9BQS2 421 aa15.91■□□□□ 0.14
USB1-214ENST00000568848 TMEM206Q9H813 350 aa15.91■□□□□ 0.14
USB1-214ENST00000568848 CD93Q9NPY3 652 aa15.91■□□□□ 0.14
USB1-214ENST00000568848 ARHGAP26Q9UNA1 814 aa15.91■□□□□ 0.14
USB1-214ENST00000568848 CPQQ9Y646 472 aa15.91■□□□□ 0.14
USB1-214ENST00000568848 PRPF6O94906 941 aaKnown RBP15.9■□□□□ 0.14
USB1-214ENST00000568848 IL18RAPO95256 599 aa15.9■□□□□ 0.14
USB1-214ENST00000568848 GCNT3O95395 438 aa15.9■□□□□ 0.14
USB1-214ENST00000568848 ENGP17813 658 aa15.9■□□□□ 0.14
USB1-214ENST00000568848 ITPKAP23677 461 aa15.9■□□□□ 0.14
USB1-214ENST00000568848 CYP27A1Q02318 531 aa15.9■□□□□ 0.14
USB1-214ENST00000568848 RING1Q06587 406 aa15.9■□□□□ 0.14
USB1-214ENST00000568848 SMARCB1Q12824 385 aa15.9■□□□□ 0.14
USB1-214ENST00000568848 SF3A1Q15459 793 aaKnown RBP15.9■□□□□ 0.14
USB1-214ENST00000568848 SLFN12LQ6IEE8 588 aa15.9■□□□□ 0.14
USB1-214ENST00000568848 FAM173BQ6P4H8 233 aa15.9■□□□□ 0.14
USB1-214ENST00000568848 NAT16Q8N8M0 369 aa15.9■□□□□ 0.14
USB1-214ENST00000568848 IL17RCQ8NAC3 791 aa15.9■□□□□ 0.14
USB1-214ENST00000568848 OLIG1Q8TAK6 271 aa15.9■□□□□ 0.14
USB1-214ENST00000568848 TMX3Q96JJ7 454 aa15.9■□□□□ 0.14
USB1-214ENST00000568848 MRPL45Q9BRJ2 306 aaKnown RBP15.9■□□□□ 0.14
USB1-214ENST00000568848 STRA6Q9BX79 667 aa15.9■□□□□ 0.14
USB1-214ENST00000568848 MRPL44Q9H9J2 332 aaKnown RBP15.9■□□□□ 0.14
USB1-214ENST00000568848 UXTQ9UBK9 157 aaPredicted RBP15.9■□□□□ 0.14
USB1-214ENST00000568848 SMG1Q96Q15 3661 aaKnown RBP15.9■□□□□ 0.14
USB1-214ENST00000568848 TCRBV21S2A2A0A5A6 115 aa15.89■□□□□ 0.13
USB1-214ENST00000568848 GABRDO14764 452 aa15.89■□□□□ 0.13
USB1-214ENST00000568848 PAX3P23760 479 aa15.89■□□□□ 0.13
USB1-214ENST00000568848 GRIK1P39086 918 aa15.89■□□□□ 0.13
USB1-214ENST00000568848 DHCR24Q15392 516 aa15.89■□□□□ 0.13
USB1-214ENST00000568848 MAP7D1Q3KQU3 841 aa15.89■□□□□ 0.13
USB1-214ENST00000568848 C8orf34Q49A92 452 aa15.89■□□□□ 0.13
USB1-214ENST00000568848 MDH1BQ5I0G3 518 aa15.89■□□□□ 0.13
USB1-214ENST00000568848 FAM171BQ6P995 826 aa15.89■□□□□ 0.13
USB1-214ENST00000568848 DNAJC19Q96DA6 116 aa15.89■□□□□ 0.13
USB1-214ENST00000568848 AK8Q96MA6 479 aa15.89■□□□□ 0.13
USB1-214ENST00000568848 CAMK1GQ96NX5 476 aa15.89■□□□□ 0.13
USB1-214ENST00000568848 GTPBP2Q9BX10 602 aaKnown RBP15.89■□□□□ 0.13
USB1-214ENST00000568848 PANK2Q9BZ23 570 aa15.89■□□□□ 0.13
USB1-214ENST00000568848 TRIM9Q9C026 710 aa15.89■□□□□ 0.13
USB1-214ENST00000568848 DPEP3Q9H4B8 488 aa15.89■□□□□ 0.13
USB1-214ENST00000568848 ABCB6Q9NP58 842 aa15.89■□□□□ 0.13
USB1-214ENST00000568848 BCCIPQ9P287 314 aaKnown RBP eCLIP15.89■□□□□ 0.13
USB1-214ENST00000568848 CFAP97Q9P2B7 532 aa15.89■□□□□ 0.13
USB1-214ENST00000568848 ZMYM5Q9UJ78 669 aa15.89■□□□□ 0.13
USB1-214ENST00000568848 HCN2Q9UL51 889 aa15.89■□□□□ 0.13
USB1-214ENST00000568848 CLIC4Q9Y696 253 aa15.89■□□□□ 0.13
USB1-214ENST00000568848 LOC400499M0QZD8 3231 aa15.89■□□□□ 0.13
USB1-214ENST00000568848 CEP192Q8TEP8 1941 aa15.88■□□□□ 0.13
USB1-214ENST00000568848 F8VP50 259 aa15.88■□□□□ 0.13
USB1-214ENST00000568848 TAF4O00268 1085 aa15.88■□□□□ 0.13
USB1-214ENST00000568848 CLDN5O00501 218 aa15.88■□□□□ 0.13
USB1-214ENST00000568848 NFATC1O95644 943 aa15.88■□□□□ 0.13
USB1-214ENST00000568848 CFIP05156 583 aa15.88■□□□□ 0.13
USB1-214ENST00000568848 CEACAM1P13688 526 aa15.88■□□□□ 0.13
USB1-214ENST00000568848 CSRP1P21291 193 aaKnown RBP15.88■□□□□ 0.13
USB1-214ENST00000568848 P2RY2P41231 377 aa15.88■□□□□ 0.13
USB1-214ENST00000568848 PNPLA4P41247 253 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms