RNA–Protein interactions for RNA: ENST00000568632.5

CDH16-207, Transcript of cadherin 16, humanhuman

TSL 1 (best) BASIC

Gene CDH16, Length 2,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-207ENST00000568632 SLC30A5Q8TAD4 765 aa16.3■□□□□ 0.2
CDH16-207ENST00000568632 LNX1Q8TBB1 728 aaPredicted RBP16.3■□□□□ 0.2
CDH16-207ENST00000568632 EPS8L3Q8TE67 593 aaKnown RBP16.3■□□□□ 0.2
CDH16-207ENST00000568632 GOLGA2P5Q9HBQ8 144 aa16.3■□□□□ 0.2
CDH16-207ENST00000568632 SEPT11Q9NVA2 429 aaKnown RBP16.3■□□□□ 0.2
CDH16-207ENST00000568632 CD4P01730 458 aa16.3■□□□□ 0.2
CDH16-207ENST00000568632 MLH1P40692 756 aa16.3■□□□□ 0.2
CDH16-207ENST00000568632 PTGIRP43119 386 aa16.3■□□□□ 0.2
CDH16-207ENST00000568632 RAP1GAPP47736 663 aa16.3■□□□□ 0.2
CDH16-207ENST00000568632 ZBTB6Q15916 424 aa16.3■□□□□ 0.2
CDH16-207ENST00000568632 TMEM270Q6UE05 265 aa16.3■□□□□ 0.2
CDH16-207ENST00000568632 LRRC8DQ7L1W4 858 aa16.3■□□□□ 0.2
CDH16-207ENST00000568632 ASRGL1Q7L266 308 aa16.3■□□□□ 0.2
CDH16-207ENST00000568632 ENOSF1Q7L5Y1 443 aa16.3■□□□□ 0.2
CDH16-207ENST00000568632 NOP9Q86U38 636 aaKnown RBP16.3■□□□□ 0.2
CDH16-207ENST00000568632 KIF2BQ8N4N8 673 aa16.3■□□□□ 0.2
CDH16-207ENST00000568632 SLC35G2Q8TBE7 412 aa16.3■□□□□ 0.2
CDH16-207ENST00000568632 NIF3L1Q9GZT8 377 aa16.3■□□□□ 0.2
CDH16-207ENST00000568632 RALGAPA2Q2PPJ7 1873 aa16.3■□□□□ 0.2
CDH16-207ENST00000568632 ASPAP45381 313 aa16.29■□□□□ 0.2
CDH16-207ENST00000568632 GBP7Q8N8V2 638 aaPredicted RBP16.29■□□□□ 0.2
CDH16-207ENST00000568632 UHMK1Q8TAS1 419 aaKnown RBP16.29■□□□□ 0.2
CDH16-207ENST00000568632 MICAL1Q8TDZ2 1067 aa16.29■□□□□ 0.2
CDH16-207ENST00000568632 EPS8L1Q8TE68 723 aa16.29■□□□□ 0.2
CDH16-207ENST00000568632 ARMC5Q96C12 935 aa16.29■□□□□ 0.2
CDH16-207ENST00000568632 HPDLQ96IR7 371 aa16.29■□□□□ 0.2
CDH16-207ENST00000568632 SYT11Q9BT88 431 aa16.29■□□□□ 0.2
CDH16-207ENST00000568632 HOMER3Q9NSC5 361 aa16.29■□□□□ 0.2
CDH16-207ENST00000568632 SPATS2LQ9NUQ6 558 aaKnown RBP16.29■□□□□ 0.2
CDH16-207ENST00000568632 ADAM22Q9P0K1 906 aa16.29■□□□□ 0.2
CDH16-207ENST00000568632 PCDHB4Q9Y5E5 795 aa16.29■□□□□ 0.2
CDH16-207ENST00000568632 GOLGA6L10A0A0M3HER8 536 aa16.29■□□□□ 0.2
CDH16-207ENST00000568632 A6NHS1 94 aa16.29■□□□□ 0.2
CDH16-207ENST00000568632 MSH2P43246 934 aa16.29■□□□□ 0.2
CDH16-207ENST00000568632 SLCO1A2P46721 670 aa16.29■□□□□ 0.2
CDH16-207ENST00000568632 CTCFP49711 727 aaPredicted RBP16.29■□□□□ 0.2
CDH16-207ENST00000568632 CDH8P55286 799 aa16.29■□□□□ 0.2
CDH16-207ENST00000568632 SOX4Q06945 474 aaPredicted RBP16.29■□□□□ 0.2
CDH16-207ENST00000568632 DSC3Q14574 896 aa16.29■□□□□ 0.2
CDH16-207ENST00000568632 ZNF394Q53GI3 561 aa16.29■□□□□ 0.2
CDH16-207ENST00000568632 SLC39A5Q6ZMH5 540 aa16.29■□□□□ 0.2
CDH16-207ENST00000568632 EXOC3L1Q86VI1 746 aa16.29■□□□□ 0.2
CDH16-207ENST00000568632 GAD1Q99259 594 aa16.29■□□□□ 0.2
CDH16-207ENST00000568632 NAP1L3Q99457 506 aaPredicted RBP16.29■□□□□ 0.2
CDH16-207ENST00000568632 FGFR1OP2Q9NVK5 253 aa16.29■□□□□ 0.2
CDH16-207ENST00000568632 CACNG4Q9UBN1 327 aa16.29■□□□□ 0.2
CDH16-207ENST00000568632 NOCTQ9UK39 431 aaKnown RBP16.29■□□□□ 0.2
CDH16-207ENST00000568632 ITGA11Q9UKX5 1188 aa16.29■□□□□ 0.2
CDH16-207ENST00000568632 NCANO14594 1321 aa16.29■□□□□ 0.2
CDH16-207ENST00000568632 PTGESO14684 152 aa16.28■□□□□ 0.2
CDH16-207ENST00000568632 CYP11B1P15538 503 aa16.28■□□□□ 0.2
CDH16-207ENST00000568632 SELPP16109 830 aa16.28■□□□□ 0.2
CDH16-207ENST00000568632 TBXAS1P24557 533 aaPredicted RBP16.28■□□□□ 0.2
CDH16-207ENST00000568632 PEX19P40855 299 aa16.28■□□□□ 0.2
CDH16-207ENST00000568632 ABL2P42684 1182 aa16.28■□□□□ 0.2
CDH16-207ENST00000568632 SARNPP82979 210 aaKnown RBP16.28■□□□□ 0.2
CDH16-207ENST00000568632 TRIM60Q495X7 471 aa16.28■□□□□ 0.2
CDH16-207ENST00000568632 ZNF667Q5HYK9 610 aa16.28■□□□□ 0.2
CDH16-207ENST00000568632 ANKRD20A2Q5SQ80 823 aa16.28■□□□□ 0.2
CDH16-207ENST00000568632 ANKRD20A1Q5TYW2 823 aa16.28■□□□□ 0.2
CDH16-207ENST00000568632 ANKRD20A3Q5VUR7 823 aa16.28■□□□□ 0.2
CDH16-207ENST00000568632 NT5DC4Q86YG4 428 aa16.28■□□□□ 0.2
CDH16-207ENST00000568632 EGFL6Q8IUX8 553 aa16.28■□□□□ 0.2
CDH16-207ENST00000568632 RFFLQ8WZ73 363 aa16.28■□□□□ 0.2
CDH16-207ENST00000568632 AGPAT1Q99943 283 aa16.28■□□□□ 0.2
CDH16-207ENST00000568632 STMN4Q9H169 189 aaPredicted RBP16.28■□□□□ 0.2
CDH16-207ENST00000568632 LAMA2P24043 3122 aaKnown RBP16.28■□□□□ 0.2
CDH16-207ENST00000568632 RASGRF2O14827 1237 aa16.28■□□□□ 0.2
CDH16-207ENST00000568632 SUN1O94901 812 aa16.28■□□□□ 0.2
CDH16-207ENST00000568632 GJB6O95452 261 aa16.28■□□□□ 0.2
CDH16-207ENST00000568632 RPL21P46778 160 aaKnown RBP16.28■□□□□ 0.2
CDH16-207ENST00000568632 RBP5P82980 135 aa16.28■□□□□ 0.2
CDH16-207ENST00000568632 ZNF211Q13398 564 aaPredicted RBP16.28■□□□□ 0.2
CDH16-207ENST00000568632 XKR4Q5GH76 650 aa16.28■□□□□ 0.2
CDH16-207ENST00000568632 MFSD5Q6N075 450 aa16.28■□□□□ 0.2
CDH16-207ENST00000568632 AGMOQ6ZNB7 445 aa16.28■□□□□ 0.2
CDH16-207ENST00000568632 RPUSD2Q8IZ73 545 aaKnown RBP16.28■□□□□ 0.2
CDH16-207ENST00000568632 GSTCDQ8NEC7 633 aa16.28■□□□□ 0.2
CDH16-207ENST00000568632 SMYD3Q9H7B4 428 aa16.28■□□□□ 0.2
CDH16-207ENST00000568632 CISHQ9NSE2 258 aa16.28■□□□□ 0.2
CDH16-207ENST00000568632 PCDH10Q9P2E7 1040 aa16.28■□□□□ 0.2
CDH16-207ENST00000568632 DERAQ9Y315 318 aa16.28■□□□□ 0.2
CDH16-207ENST00000568632 PCDHA3Q9Y5H8 950 aa16.28■□□□□ 0.2
CDH16-207ENST00000568632 TCP11X1B4DZS4 312 aa16.27■□□□□ 0.2
CDH16-207ENST00000568632 RIPK2O43353 540 aa16.27■□□□□ 0.2
CDH16-207ENST00000568632 NBNO60934 754 aa16.27■□□□□ 0.2
CDH16-207ENST00000568632 ATF7P17544 494 aaPredicted RBP16.27■□□□□ 0.2
CDH16-207ENST00000568632 CHRNB2P17787 502 aa16.27■□□□□ 0.2
CDH16-207ENST00000568632 SSTR3P32745 418 aaPredicted RBP16.27■□□□□ 0.2
CDH16-207ENST00000568632 TLE2Q04725 743 aa16.27■□□□□ 0.2
CDH16-207ENST00000568632 GPNMBQ14956 572 aa16.27■□□□□ 0.2
CDH16-207ENST00000568632 CCDC38Q502W7 563 aa16.27■□□□□ 0.2
CDH16-207ENST00000568632 RTN4RL1Q86UN2 441 aaPredicted RBP16.27■□□□□ 0.2
CDH16-207ENST00000568632 FITM2Q8N6M3 262 aa16.27■□□□□ 0.2
CDH16-207ENST00000568632 BEST2Q8NFU1 509 aa16.27■□□□□ 0.2
CDH16-207ENST00000568632 ALG3Q92685 438 aa16.27■□□□□ 0.2
CDH16-207ENST00000568632 FAM81BQ96LP2 452 aa16.27■□□□□ 0.2
CDH16-207ENST00000568632 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.27■□□□□ 0.2
CDH16-207ENST00000568632 TAS2R14Q9NYV8 317 aa16.27■□□□□ 0.2
CDH16-207ENST00000568632 SCN1AP35498 2009 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms