RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-223ENST00000568301 KBTBD7Q8WVZ9 684 aa16.09■□□□□ 0.17
COMMD4-223ENST00000568301 EZH1Q92800 747 aaPredicted RBP16.09■□□□□ 0.17
COMMD4-223ENST00000568301 ACDQ96AP0 544 aa16.09■□□□□ 0.17
COMMD4-223ENST00000568301 INTS4Q96HW7 963 aaKnown RBP16.09■□□□□ 0.17
COMMD4-223ENST00000568301 USP28Q96RU2 1077 aa16.09■□□□□ 0.17
COMMD4-223ENST00000568301 SYT15Q9BQS2 421 aa16.09■□□□□ 0.17
COMMD4-223ENST00000568301 TNMDQ9H2S6 317 aa16.09■□□□□ 0.17
COMMD4-223ENST00000568301 ZSCAN16Q9H4T2 348 aaPredicted RBP16.09■□□□□ 0.17
COMMD4-223ENST00000568301 EHD2Q9NZN4 543 aa16.09■□□□□ 0.17
COMMD4-223ENST00000568301 WNT6Q9Y6F9 365 aa16.09■□□□□ 0.17
COMMD4-223ENST00000568301 FAM208BQ5VWN6 2430 aa16.09■□□□□ 0.17
COMMD4-223ENST00000568301 DMXL2Q8TDJ6 3036 aa16.09■□□□□ 0.17
COMMD4-223ENST00000568301 KIAA1549LQ6ZVL6 1849 aa16.08■□□□□ 0.17
COMMD4-223ENST00000568301 C2orf78A6NCI8 922 aa16.08■□□□□ 0.16
COMMD4-223ENST00000568301 APBB3O95704 486 aa16.08■□□□□ 0.16
COMMD4-223ENST00000568301 FAM163BP0C2L3 166 aa16.08■□□□□ 0.16
COMMD4-223ENST00000568301 WARSP23381 471 aaKnown RBP16.08■□□□□ 0.16
COMMD4-223ENST00000568301 GRIK1P39086 918 aa16.08■□□□□ 0.16
COMMD4-223ENST00000568301 PPP3CCP48454 512 aa16.08■□□□□ 0.16
COMMD4-223ENST00000568301 CREB5Q02930 508 aa16.08■□□□□ 0.16
COMMD4-223ENST00000568301 CBWD2Q8IUF1 395 aa16.08■□□□□ 0.16
COMMD4-223ENST00000568301 WDR49Q8IV35 697 aa16.08■□□□□ 0.16
COMMD4-223ENST00000568301 ABCA7Q8IZY2 2146 aa16.08■□□□□ 0.16
COMMD4-223ENST00000568301 PDILTQ8N807 584 aa16.08■□□□□ 0.16
COMMD4-223ENST00000568301 EDEM2Q9BV94 578 aa16.08■□□□□ 0.16
COMMD4-223ENST00000568301 LINC00597Q9H2U6 94 aa16.08■□□□□ 0.16
COMMD4-223ENST00000568301 CRTAC1Q9NQ79 661 aa16.08■□□□□ 0.16
COMMD4-223ENST00000568301 KBTBD4Q9NVX7 518 aa16.08■□□□□ 0.16
COMMD4-223ENST00000568301 PTPRJQ12913 1337 aa16.08■□□□□ 0.16
COMMD4-223ENST00000568301 BAHCC1Q9P281 2608 aa16.07■□□□□ 0.16
COMMD4-223ENST00000568301 C4orf47A7E2U8 309 aa16.07■□□□□ 0.16
COMMD4-223ENST00000568301 C1QTNF9BB2RNN3 333 aa16.07■□□□□ 0.16
COMMD4-223ENST00000568301 EIF3DO15371 548 aaKnown RBP eCLIP16.07■□□□□ 0.16
COMMD4-223ENST00000568301 RHOBTB1O94844 696 aa16.07■□□□□ 0.16
COMMD4-223ENST00000568301 CAVIN2O95810 425 aa16.07■□□□□ 0.16
COMMD4-223ENST00000568301 C1QTNF9P0C862 333 aa16.07■□□□□ 0.16
COMMD4-223ENST00000568301 BDNFP23560 247 aa16.07■□□□□ 0.16
COMMD4-223ENST00000568301 HOXD13P35453 343 aa16.07■□□□□ 0.16
COMMD4-223ENST00000568301 NASPP49321 788 aaPredicted RBP16.07■□□□□ 0.16
COMMD4-223ENST00000568301 NOVA1P51513 510 aaKnown RBP16.07■□□□□ 0.16
COMMD4-223ENST00000568301 DMC1Q14565 340 aa16.07■□□□□ 0.16
COMMD4-223ENST00000568301 ELF2Q15723 593 aa16.07■□□□□ 0.16
COMMD4-223ENST00000568301 LMBRD2Q68DH5 695 aaPredicted RBP16.07■□□□□ 0.16
COMMD4-223ENST00000568301 DENND5BQ6ZUT9 1274 aa16.07■□□□□ 0.16
COMMD4-223ENST00000568301 MYCBPAPQ8TBZ2 947 aa16.07■□□□□ 0.16
COMMD4-223ENST00000568301 ZNF507Q8TCN5 953 aa16.07■□□□□ 0.16
COMMD4-223ENST00000568301 MYLPFQ96A32 169 aa16.07■□□□□ 0.16
COMMD4-223ENST00000568301 TTLL2Q9BWV7 592 aa16.07■□□□□ 0.16
COMMD4-223ENST00000568301 CUEDC2Q9H467 287 aa16.07■□□□□ 0.16
COMMD4-223ENST00000568301 HSPBP1Q9NZL4 362 aa16.07■□□□□ 0.16
COMMD4-223ENST00000568301 TRPM5Q9NZQ8 1165 aa16.07■□□□□ 0.16
COMMD4-223ENST00000568301 MTMR6Q9Y217 621 aa16.07■□□□□ 0.16
COMMD4-223ENST00000568301 INVSQ9Y283 1065 aa16.07■□□□□ 0.16
COMMD4-223ENST00000568301 NUP205Q92621 2012 aa16.07■□□□□ 0.16
COMMD4-223ENST00000568301 NBEAQ8NFP9 2946 aa16.06■□□□□ 0.16
COMMD4-223ENST00000568301 IGF2RP11717 2491 aa16.06■□□□□ 0.16
COMMD4-223ENST00000568301 BCLAF3A2AJT9 711 aaKnown RBP16.06■□□□□ 0.16
COMMD4-223ENST00000568301 TACC1O75410 805 aa16.06■□□□□ 0.16
COMMD4-223ENST00000568301 NFATC1O95644 943 aa16.06■□□□□ 0.16
COMMD4-223ENST00000568301 PDGFRBP09619 1106 aa16.06■□□□□ 0.16
COMMD4-223ENST00000568301 ANXA13P27216 316 aa16.06■□□□□ 0.16
COMMD4-223ENST00000568301 GNL1P36915 607 aaPredicted RBP16.06■□□□□ 0.16
COMMD4-223ENST00000568301 PSMC1P62191 440 aaKnown RBP16.06■□□□□ 0.16
COMMD4-223ENST00000568301 SNRPFP62306 86 aaKnown RBP16.06■□□□□ 0.16
COMMD4-223ENST00000568301 NOP14P78316 857 aaKnown RBP16.06■□□□□ 0.16
COMMD4-223ENST00000568301 AMPD3Q01432 767 aa16.06■□□□□ 0.16
COMMD4-223ENST00000568301 PSMD2Q13200 908 aa16.06■□□□□ 0.16
COMMD4-223ENST00000568301 E2F4Q16254 413 aa16.06■□□□□ 0.16
COMMD4-223ENST00000568301 CNNM4Q6P4Q7 775 aa16.06■□□□□ 0.16
COMMD4-223ENST00000568301 TRAPPC11Q7Z392 1133 aa16.06■□□□□ 0.16
COMMD4-223ENST00000568301 LINC00301Q8NCQ3 95 aa16.06■□□□□ 0.16
COMMD4-223ENST00000568301 GLIS3Q8NEA6 775 aa16.06■□□□□ 0.16
COMMD4-223ENST00000568301 TTC16Q8NEE8 873 aa16.06■□□□□ 0.16
COMMD4-223ENST00000568301 PCED1BQ96HM7 432 aa16.06■□□□□ 0.16
COMMD4-223ENST00000568301 MMS19Q96T76 1030 aa16.06■□□□□ 0.16
COMMD4-223ENST00000568301 TRIM9Q9C026 710 aa16.06■□□□□ 0.16
COMMD4-223ENST00000568301 LAMA5O15230 3695 aa16.06■□□□□ 0.16
COMMD4-223ENST00000568301 DSPP15924 2871 aaKnown RBP16.05■□□□□ 0.16
COMMD4-223ENST00000568301 ATRXP46100 2492 aa16.05■□□□□ 0.16
COMMD4-223ENST00000568301 LNP1A1A4G5 178 aa16.05■□□□□ 0.16
COMMD4-223ENST00000568301 ZNF840PA6NDX5 716 aa16.05■□□□□ 0.16
COMMD4-223ENST00000568301 TRIM66O15016 1216 aa16.05■□□□□ 0.16
COMMD4-223ENST00000568301 CST3P01034 146 aaPredicted RBP16.05■□□□□ 0.16
COMMD4-223ENST00000568301 SPINK2P20155 84 aa16.05■□□□□ 0.16
COMMD4-223ENST00000568301 USP46P62068 366 aa16.05■□□□□ 0.16
COMMD4-223ENST00000568301 SLC7A9P82251 487 aa16.05■□□□□ 0.16
COMMD4-223ENST00000568301 ZXDBP98169 803 aa16.05■□□□□ 0.16
COMMD4-223ENST00000568301 CYP27A1Q02318 531 aa16.05■□□□□ 0.16
COMMD4-223ENST00000568301 STK38Q15208 465 aa16.05■□□□□ 0.16
COMMD4-223ENST00000568301 SNRNP35Q16560 246 aaKnown RBP16.05■□□□□ 0.16
COMMD4-223ENST00000568301 UNQ6494/PRO21346Q6UXR6 183 aa16.05■□□□□ 0.16
COMMD4-223ENST00000568301 EPM2AIP1Q7L775 607 aaPredicted RBP16.05■□□□□ 0.16
COMMD4-223ENST00000568301 C11orf74Q86VG3 221 aa16.05■□□□□ 0.16
COMMD4-223ENST00000568301 ADGRG2Q8IZP9 1017 aa16.05■□□□□ 0.16
COMMD4-223ENST00000568301 HPS3Q969F9 1004 aa16.05■□□□□ 0.16
COMMD4-223ENST00000568301 C8orf48Q96LL4 319 aa16.05■□□□□ 0.16
COMMD4-223ENST00000568301 SNX25Q9H3E2 840 aa16.05■□□□□ 0.16
COMMD4-223ENST00000568301 ZMIZ1Q9ULJ6 1067 aa16.05■□□□□ 0.16
COMMD4-223ENST00000568301 WASF3Q9UPY6 502 aa16.05■□□□□ 0.16
COMMD4-223ENST00000568301 THADAQ6YHU6 1953 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms