RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 MKRN3Q13064 507 aaKnown RBP9.38□□□□□ -0.91
HDGFL3-206ENST00000568294 HADHQ16836 314 aaKnown RBP9.38□□□□□ -0.91
HDGFL3-206ENST00000568294 EEF1DP3Q658K8 133 aa9.38□□□□□ -0.91
HDGFL3-206ENST00000568294 CLNKQ7Z7G1 428 aa9.38□□□□□ -0.91
HDGFL3-206ENST00000568294 SLC7A6OSQ96CW6 309 aaPredicted RBP9.38□□□□□ -0.91
HDGFL3-206ENST00000568294 TWNKQ96RR1 684 aa9.38□□□□□ -0.91
HDGFL3-206ENST00000568294 CGRRF1Q99675 332 aa9.38□□□□□ -0.91
HDGFL3-206ENST00000568294 APOL6Q9BWW8 343 aa9.38□□□□□ -0.91
HDGFL3-206ENST00000568294 ARHGAP28Q9P2N2 729 aa9.38□□□□□ -0.91
HDGFL3-206ENST00000568294 CYTH4Q9UIA0 394 aa9.38□□□□□ -0.91
HDGFL3-206ENST00000568294 CEP350Q5VT06 3117 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 RNF8O76064 485 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 CALB1P05937 261 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 SUPT20HL2P0C7V6 817 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 MIPP30301 263 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 SUPT20HL1Q3ZLR7 823 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 CES3Q6UWW8 571 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 RINLQ6ZS11 566 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 CDHR3Q6ZTQ4 885 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 ASRGL1Q7L266 308 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 POLNQ7Z5Q5 900 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 LMNTD2Q8IXW0 634 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 MICALL2Q8IY33 904 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 C12orf29Q8N999 325 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 SHKBP1Q8TBC3 707 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 WDR60Q8WVS4 1066 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 COPS5Q92905 334 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 CPB2Q96IY4 423 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 MMP19Q99542 508 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 WDR83Q9BRX9 315 aaKnown RBP9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 THTPAQ9BU02 230 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 NMUR2Q9GZQ4 415 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 R3HDMLQ9H3Y0 253 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 RABGEF1Q9UJ41 708 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 HACL1Q9UJ83 578 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 SMG5Q9UPR3 1016 aaKnown RBP9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 ATP8B3O60423 1300 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 DPPA5A6NC42 116 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 B2RBV5 119 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 ZMPSTE24O75844 475 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 ITGBL1O95965 494 aaPredicted RBP9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 ITGB3P05106 788 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 PRKCBP05771 671 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 NUMBP49757 651 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 TMEM62Q0P6H9 643 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 CHI3L2Q15782 390 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 TSNAXIP1Q2TAA8 658 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 ZC3H12AQ5D1E8 599 aaKnown RBP9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 PPIL6Q8IXY8 311 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 STK32AQ8WU08 396 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 DNAJC9Q8WXX5 260 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 FBXL18Q96ME1 805 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 TTC25Q96NG3 672 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 NIF3L1Q9GZT8 377 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 PIDD1Q9HB75 910 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 CYP39A1Q9NYL5 469 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 LGALS13Q9UHV8 139 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 TCRBV9S1A1TA0A576 114 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 CXorf49A8MYA2 514 aaPredicted RBP9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 TXNDC9O14530 226 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 ERBB2P04626 1255 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 CALB2P22676 271 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 AMPD1P23109 780 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 TCF7P36402 384 aaPredicted RBP9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 ATXN1P54253 815 aaKnown RBP9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 ROR1Q01973 937 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 MORF4L2Q15014 288 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 Q3C1V9 767 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 CIAPIN1Q6FI81 312 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 STYK1Q6J9G0 422 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 SESTD1Q86VW0 696 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 WDTC1Q8N5D0 677 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 SPDYE1Q8NFV5 336 aaPredicted RBP9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 FAXDC2Q96IV6 333 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 CADM1Q9BY67 442 aaKnown RBP9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 STARD13Q9Y3M8 1113 aa9.37□□□□□ -0.91
HDGFL3-206ENST00000568294 LOC100653049A0A140TA62 436 aa9.36□□□□□ -0.91
HDGFL3-206ENST00000568294 LYPLA1O75608 230 aaPredicted RBP9.36□□□□□ -0.91
HDGFL3-206ENST00000568294 KRT34O76011 436 aa9.36□□□□□ -0.91
HDGFL3-206ENST00000568294 ZBTB7AO95365 584 aa9.36□□□□□ -0.91
HDGFL3-206ENST00000568294 TNNC2P02585 160 aa9.36□□□□□ -0.91
HDGFL3-206ENST00000568294 NFICP08651 508 aa9.36□□□□□ -0.91
HDGFL3-206ENST00000568294 TPBGLP0DKB5 382 aa9.36□□□□□ -0.91
HDGFL3-206ENST00000568294 TBXAS1P24557 533 aaPredicted RBP9.36□□□□□ -0.91
HDGFL3-206ENST00000568294 STAT5BP51692 787 aa9.36□□□□□ -0.91
HDGFL3-206ENST00000568294 GTF2A2P52657 109 aa9.36□□□□□ -0.91
HDGFL3-206ENST00000568294 C1QBPQ07021 282 aaKnown RBP9.36□□□□□ -0.91
HDGFL3-206ENST00000568294 PTP4A2Q12974 167 aa9.36□□□□□ -0.91
HDGFL3-206ENST00000568294 MOGSQ13724 837 aa9.36□□□□□ -0.91
HDGFL3-206ENST00000568294 UBAP2LQ14157 1087 aaKnown RBP9.36□□□□□ -0.91
HDGFL3-206ENST00000568294 DUOXA2Q1HG44 320 aa9.36□□□□□ -0.91
HDGFL3-206ENST00000568294 RNF220Q5VTB9 566 aa9.36□□□□□ -0.91
HDGFL3-206ENST00000568294 AGGF1Q8N302 714 aaeCLIP9.36□□□□□ -0.91
HDGFL3-206ENST00000568294 ZNRF3Q9ULT6 936 aa9.36□□□□□ -0.91
HDGFL3-206ENST00000568294 AFG3L2Q9Y4W6 797 aa9.36□□□□□ -0.91
HDGFL3-206ENST00000568294 I3L4J1 428 aa9.36□□□□□ -0.91
HDGFL3-206ENST00000568294 FCHO1O14526 889 aa9.36□□□□□ -0.91
HDGFL3-206ENST00000568294 HCRTO43612 131 aa9.36□□□□□ -0.91
HDGFL3-206ENST00000568294 LYPLA2O95372 231 aa9.36□□□□□ -0.91
HDGFL3-206ENST00000568294 ZBED1O96006 694 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms