RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 SP9P0CG40 484 aa11.91□□□□□ -0.5
CDH3-206ENST00000567674 GJA1P17302 382 aa11.91□□□□□ -0.5
CDH3-206ENST00000567674 ACAT1P24752 427 aaKnown RBP11.91□□□□□ -0.5
CDH3-206ENST00000567674 TARSP26639 723 aaKnown RBP11.91□□□□□ -0.5
CDH3-206ENST00000567674 SLC7A9P82251 487 aa11.91□□□□□ -0.5
CDH3-206ENST00000567674 INCA1Q0VD86 236 aa11.91□□□□□ -0.5
CDH3-206ENST00000567674 NR1H3Q13133 447 aa11.91□□□□□ -0.5
CDH3-206ENST00000567674 STIM1Q13586 685 aa11.91□□□□□ -0.5
CDH3-206ENST00000567674 GRM2Q14416 872 aa11.91□□□□□ -0.5
CDH3-206ENST00000567674 ST3GAL2Q16842 350 aa11.91□□□□□ -0.5
CDH3-206ENST00000567674 CEP135Q66GS9 1140 aa11.91□□□□□ -0.5
CDH3-206ENST00000567674 KRT39Q6A163 491 aa11.91□□□□□ -0.5
CDH3-206ENST00000567674 ZC3H3Q8IXZ2 948 aaKnown RBP11.91□□□□□ -0.5
CDH3-206ENST00000567674 FAM186BQ8IYM0 893 aa11.91□□□□□ -0.5
CDH3-206ENST00000567674 SPEM1Q8N4L4 309 aa11.91□□□□□ -0.5
CDH3-206ENST00000567674 ZNF276Q8N554 614 aa11.91□□□□□ -0.5
CDH3-206ENST00000567674 ZBTB44Q8NCP5 570 aa11.91□□□□□ -0.5
CDH3-206ENST00000567674 STKLD1Q8NE28 680 aa11.91□□□□□ -0.5
CDH3-206ENST00000567674 SLITRK1Q96PX8 696 aa11.91□□□□□ -0.5
CDH3-206ENST00000567674 TSG101Q99816 390 aa11.91□□□□□ -0.5
CDH3-206ENST00000567674 FOXQ1Q9C009 403 aa11.91□□□□□ -0.5
CDH3-206ENST00000567674 FBXO44Q9H4M3 255 aa11.91□□□□□ -0.5
CDH3-206ENST00000567674 METTL14Q9HCE5 456 aaKnown RBP11.91□□□□□ -0.5
CDH3-206ENST00000567674 TMEM8AQ9HCN3 771 aa11.91□□□□□ -0.5
CDH3-206ENST00000567674 CSNK1G1Q9HCP0 422 aa11.91□□□□□ -0.5
CDH3-206ENST00000567674 GCNT4Q9P109 453 aa11.91□□□□□ -0.5
CDH3-206ENST00000567674 ZNF292O60281 2723 aa11.91□□□□□ -0.5
CDH3-206ENST00000567674 SPECC1L-ADORA2AF8WAN1 911 aa11.9□□□□□ -0.5
CDH3-206ENST00000567674 TRDMT1O14717 391 aaKnown RBP11.9□□□□□ -0.5
CDH3-206ENST00000567674 SLC9A3R1O14745 358 aaPredicted RBP11.9□□□□□ -0.5
CDH3-206ENST00000567674 ATG13O75143 517 aa11.9□□□□□ -0.5
CDH3-206ENST00000567674 AKAP3O75969 853 aa11.9□□□□□ -0.5
CDH3-206ENST00000567674 VNN1O95497 513 aa11.9□□□□□ -0.5
CDH3-206ENST00000567674 OLFM2O95897 454 aa11.9□□□□□ -0.5
CDH3-206ENST00000567674 PDGFRBP09619 1106 aa11.9□□□□□ -0.5
CDH3-206ENST00000567674 EPB41P11171 864 aaKnown RBP11.9□□□□□ -0.5
CDH3-206ENST00000567674 CHRNB1P11230 501 aa11.9□□□□□ -0.5
CDH3-206ENST00000567674 HDCP19113 662 aa11.9□□□□□ -0.5
CDH3-206ENST00000567674 BDNFP23560 247 aa11.9□□□□□ -0.5
CDH3-206ENST00000567674 CTHP32929 405 aa11.9□□□□□ -0.5
CDH3-206ENST00000567674 KPNA1P52294 538 aaPredicted RBP11.9□□□□□ -0.5
CDH3-206ENST00000567674 CYP27A1Q02318 531 aa11.9□□□□□ -0.5
CDH3-206ENST00000567674 RUNX3Q13761 415 aa11.9□□□□□ -0.5
CDH3-206ENST00000567674 NUP93Q8N1F7 819 aa11.9□□□□□ -0.5
CDH3-206ENST00000567674 MAB21L3Q8N8X9 362 aa11.9□□□□□ -0.5
CDH3-206ENST00000567674 PLEKHO2Q8TD55 490 aa11.9□□□□□ -0.5
CDH3-206ENST00000567674 OSCP1Q8WVF1 389 aa11.9□□□□□ -0.5
CDH3-206ENST00000567674 USP13Q92995 863 aaPredicted RBP11.9□□□□□ -0.5
CDH3-206ENST00000567674 ATP2A3Q93084 1043 aa11.9□□□□□ -0.5
CDH3-206ENST00000567674 OTUB2Q96DC9 234 aa11.9□□□□□ -0.5
CDH3-206ENST00000567674 SMARCD1Q96GM5 515 aa11.9□□□□□ -0.5
CDH3-206ENST00000567674 DHTKD1Q96HY7 919 aaPredicted RBP11.9□□□□□ -0.5
CDH3-206ENST00000567674 MRPL45Q9BRJ2 306 aaKnown RBP11.9□□□□□ -0.5
CDH3-206ENST00000567674 UBXN6Q9BZV1 441 aa11.9□□□□□ -0.5
CDH3-206ENST00000567674 GOLPH3LQ9H4A5 285 aa11.9□□□□□ -0.5
CDH3-206ENST00000567674 SPATA6Q9NWH7 488 aaPredicted RBP11.9□□□□□ -0.5
CDH3-206ENST00000567674 ZSCAN32Q9NX65 697 aa11.9□□□□□ -0.5
CDH3-206ENST00000567674 NXF1Q9UBU9 619 aaKnown RBP11.9□□□□□ -0.5
CDH3-206ENST00000567674 COQ4Q9Y3A0 265 aa11.9□□□□□ -0.5
CDH3-206ENST00000567674 BAHCC1Q9P281 2608 aa11.9□□□□□ -0.51
CDH3-206ENST00000567674 ZNF840PA6NDX5 716 aa11.89□□□□□ -0.51
CDH3-206ENST00000567674 NRG2O14511 850 aaPredicted RBP11.89□□□□□ -0.51
CDH3-206ENST00000567674 PSMA7O14818 248 aa11.89□□□□□ -0.51
CDH3-206ENST00000567674 KINO60870 393 aaKnown RBP11.89□□□□□ -0.51
CDH3-206ENST00000567674 LILRB5O75023 590 aa11.89□□□□□ -0.51
CDH3-206ENST00000567674 ATP2C2O75185 946 aa11.89□□□□□ -0.51
CDH3-206ENST00000567674 DRD1P21728 446 aa11.89□□□□□ -0.51
CDH3-206ENST00000567674 SDHBP21912 280 aa11.89□□□□□ -0.51
CDH3-206ENST00000567674 CASP4P49662 377 aa11.89□□□□□ -0.51
CDH3-206ENST00000567674 CYP4F8P98187 520 aa11.89□□□□□ -0.51
CDH3-206ENST00000567674 CCINQ13939 588 aa11.89□□□□□ -0.51
CDH3-206ENST00000567674 ZNF77Q15935 545 aa11.89□□□□□ -0.51
CDH3-206ENST00000567674 PREPLQ4J6C6 727 aaPredicted RBP11.89□□□□□ -0.51
CDH3-206ENST00000567674 MDH1BQ5I0G3 518 aa11.89□□□□□ -0.51
CDH3-206ENST00000567674 STXBP5Q5T5C0 1151 aa11.89□□□□□ -0.51
CDH3-206ENST00000567674 TXNDC8Q6A555 127 aa11.89□□□□□ -0.51
CDH3-206ENST00000567674 SCN4BQ8IWT1 228 aa11.89□□□□□ -0.51
CDH3-206ENST00000567674 MAML2Q8IZL2 1156 aaPredicted RBP11.89□□□□□ -0.51
CDH3-206ENST00000567674 CPA6Q8N4T0 437 aa11.89□□□□□ -0.51
CDH3-206ENST00000567674 ATRIPQ8WXE1 791 aa11.89□□□□□ -0.51
CDH3-206ENST00000567674 SMARCE1Q969G3 411 aa11.89□□□□□ -0.51
CDH3-206ENST00000567674 RSPRY1Q96DX4 576 aa11.89□□□□□ -0.51
CDH3-206ENST00000567674 LRRC3BQ96PB8 259 aa11.89□□□□□ -0.51
CDH3-206ENST00000567674 HNRNPABQ99729 332 aaKnown RBP11.89□□□□□ -0.51
CDH3-206ENST00000567674 LMAN1LQ9HAT1 526 aa11.89□□□□□ -0.51
CDH3-206ENST00000567674 DMAP1Q9NPF5 467 aaPredicted RBP11.89□□□□□ -0.51
CDH3-206ENST00000567674 GKN1Q9NS71 199 aa11.89□□□□□ -0.51
CDH3-206ENST00000567674 MAGED2Q9UNF1 606 aaPredicted RBP11.89□□□□□ -0.51
CDH3-206ENST00000567674 MTF2Q9Y483 593 aaPredicted RBP11.89□□□□□ -0.51
CDH3-206ENST00000567674 TPRP12270 2363 aaKnown RBP11.89□□□□□ -0.51
CDH3-206ENST00000567674 F5P12259 2224 aa11.88□□□□□ -0.51
CDH3-206ENST00000567674 CHD8Q9HCK8 2581 aa11.88□□□□□ -0.51
CDH3-206ENST00000567674 DENND4CQ5VZ89 1909 aa11.88□□□□□ -0.51
CDH3-206ENST00000567674 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.88□□□□□ -0.51
CDH3-206ENST00000567674 CHURC1-FNTBB4DL54 471 aa11.88□□□□□ -0.51
CDH3-206ENST00000567674 F8VP50 259 aa11.88□□□□□ -0.51
CDH3-206ENST00000567674 TULP1O00294 542 aaPredicted RBP11.88□□□□□ -0.51
CDH3-206ENST00000567674 TNFRSF10BO14763 440 aa11.88□□□□□ -0.51
CDH3-206ENST00000567674 P4HA2O15460 535 aa11.88□□□□□ -0.51
CDH3-206ENST00000567674 FOXD2O60548 495 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms