RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 CHRNB2P17787 502 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 CCND3P30281 292 aaPredicted RBP6.16□□□□□ -1.42
SF3B3-210ENST00000567654 CASQ1P31415 396 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 GTF2F1P35269 517 aaKnown RBP eCLIP6.16□□□□□ -1.42
SF3B3-210ENST00000567654 MATR3P43243 847 aaKnown RBP eCLIP6.16□□□□□ -1.42
SF3B3-210ENST00000567654 MAGEA1P43355 309 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 PSMC4P43686 418 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 FLT3LGP49771 235 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 GPC3P51654 580 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 TERF1P54274 439 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 INHBEP58166 350 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 CHMP4BP1P59074 171 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 OSTNP61366 133 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 ADAM17P78536 824 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 HTRA3P83110 453 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 LACTBP83111 547 aaPredicted RBP6.16□□□□□ -1.42
SF3B3-210ENST00000567654 AMPD2Q01433 879 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 CLCQ05315 142 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 PRKCZQ05513 592 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 MCL1Q07820 350 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 MXD4Q14582 209 aaPredicted RBP6.16□□□□□ -1.42
SF3B3-210ENST00000567654 KIF22Q14807 665 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 SLC18A3Q16572 532 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 MAPK6Q16659 721 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 DGKDQ16760 1214 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 KIAA0753Q2KHM9 967 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 ZNF568Q3ZCX4 644 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 ZACNQ401N2 412 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 ARHGAP29Q52LW3 1261 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 CCDC122Q5T0U0 273 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 PRAMEF13Q5VWM6 474 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 KRT39Q6A163 491 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 ZPBP2Q6X784 338 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 ARMCX6Q7L4S7 300 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 ZDHHC13Q8IUH4 622 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 BRSK2Q8IWQ3 736 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 ZBTB8OSQ8IWT0 167 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 EFCAB13Q8IY85 973 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 KIAA0319LQ8IZA0 1049 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 SLC30A5Q8TAD4 765 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 SOCS4Q8WXH5 440 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 HHIPL1Q96JK4 782 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 CAPNS2Q96L46 248 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 CGRRF1Q99675 332 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 MRPL4Q9BYD3 311 aaKnown RBP6.16□□□□□ -1.42
SF3B3-210ENST00000567654 IFIH1Q9BYX4 1025 aaKnown RBP6.16□□□□□ -1.42
SF3B3-210ENST00000567654 INO80BQ9C086 356 aaPredicted RBP6.16□□□□□ -1.42
SF3B3-210ENST00000567654 C2orf40Q9H1Z8 148 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 CDT1Q9H211 546 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 DEF6Q9H4E7 631 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 PDZD7Q9H5P4 517 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 APOBEC3GQ9HC16 384 aaKnown RBP6.16□□□□□ -1.42
SF3B3-210ENST00000567654 UBE2TQ9NPD8 197 aaPredicted RBP6.16□□□□□ -1.42
SF3B3-210ENST00000567654 RAB20Q9NX57 234 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 RNF186Q9NXI6 227 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 SLC5A4Q9NY91 659 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 TAS2R14Q9NYV8 317 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 HDAC6Q9UBN7 1215 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 REV1Q9UBZ9 1251 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 KLHL3Q9UH77 587 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 CPSF3Q9UKF6 684 aaKnown RBP6.16□□□□□ -1.42
SF3B3-210ENST00000567654 ZNF215Q9UL58 517 aaPredicted RBP6.16□□□□□ -1.42
SF3B3-210ENST00000567654 MYO6Q9UM54 1294 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 AKT3Q9Y243 479 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 TET1Q8NFU7 2136 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 NLRC5Q86WI3 1866 aa6.15□□□□□ -1.42
SF3B3-210ENST00000567654 CEP350Q5VT06 3117 aa6.15□□□□□ -1.42
SF3B3-210ENST00000567654 OGTO15294 1046 aa6.15□□□□□ -1.42
SF3B3-210ENST00000567654 CLDN3O15551 220 aa6.15□□□□□ -1.42
SF3B3-210ENST00000567654 NCK2O43639 380 aa6.15□□□□□ -1.42
SF3B3-210ENST00000567654 BUB1O43683 1085 aa6.15□□□□□ -1.42
SF3B3-210ENST00000567654 KIF5CO60282 957 aa6.15□□□□□ -1.42
SF3B3-210ENST00000567654 TSPAN1O60635 241 aa6.15□□□□□ -1.42
SF3B3-210ENST00000567654 GPR32O75388 356 aa6.15□□□□□ -1.42
SF3B3-210ENST00000567654 TOM1L1O75674 476 aa6.15□□□□□ -1.42
SF3B3-210ENST00000567654 TOMM70O94826 608 aa6.15□□□□□ -1.42
SF3B3-210ENST00000567654 HTR3BO95264 441 aa6.15□□□□□ -1.42
SF3B3-210ENST00000567654 SGPL1O95470 568 aa6.15□□□□□ -1.42
SF3B3-210ENST00000567654 CST3P01034 146 aaPredicted RBP6.15□□□□□ -1.42
SF3B3-210ENST00000567654 CXCL8P10145 99 aa6.15□□□□□ -1.42
SF3B3-210ENST00000567654 FERP16591 822 aa6.15□□□□□ -1.42
SF3B3-210ENST00000567654 ARF4P18085 180 aaPredicted RBP6.15□□□□□ -1.42
SF3B3-210ENST00000567654 STAT1P42224 750 aa6.15□□□□□ -1.42
SF3B3-210ENST00000567654 EFNA5P52803 228 aa6.15□□□□□ -1.42
SF3B3-210ENST00000567654 KRT83P78385 493 aa6.15□□□□□ -1.42
SF3B3-210ENST00000567654 ENPEPQ07075 957 aa6.15□□□□□ -1.42
SF3B3-210ENST00000567654 PRPF4BQ13523 1007 aaKnown RBP6.15□□□□□ -1.42
SF3B3-210ENST00000567654 TFDP1Q14186 410 aa6.15□□□□□ -1.42
SF3B3-210ENST00000567654 FAM187BQ17R55 369 aa6.15□□□□□ -1.42
SF3B3-210ENST00000567654 ATF7IP2Q5U623 682 aa6.15□□□□□ -1.42
SF3B3-210ENST00000567654 SLFN12LQ6IEE8 588 aa6.15□□□□□ -1.42
SF3B3-210ENST00000567654 NFRKBQ6P4R8 1299 aa6.15□□□□□ -1.42
SF3B3-210ENST00000567654 MPZL3Q6UWV2 235 aa6.15□□□□□ -1.42
SF3B3-210ENST00000567654 TSHZ1Q6ZSZ6 1077 aa6.15□□□□□ -1.42
SF3B3-210ENST00000567654 NOP9Q86U38 636 aaKnown RBP6.15□□□□□ -1.42
SF3B3-210ENST00000567654 SLC47A2Q86VL8 602 aa6.15□□□□□ -1.42
SF3B3-210ENST00000567654 HID1Q8IV36 788 aa6.15□□□□□ -1.42
SF3B3-210ENST00000567654 THNSL1Q8IYQ7 743 aa6.15□□□□□ -1.42
SF3B3-210ENST00000567654 PPM1KQ8N3J5 372 aa6.15□□□□□ -1.42
SF3B3-210ENST00000567654 FBXL13Q8NEE6 735 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms