RNA–Protein interactions for RNA: ENST00000566808.2

CDH3-205, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-205ENST00000566808 NECAB1Q8N987 351 aa18.08■□□□□ 0.48
CDH3-205ENST00000566808 UBL7Q96S82 380 aaPredicted RBP18.08■□□□□ 0.48
CDH3-205ENST00000566808 C2CD2Q9Y426 696 aa18.08■□□□□ 0.48
CDH3-205ENST00000566808 A0A1W2PQD8 194 aa18.07■□□□□ 0.48
CDH3-205ENST00000566808 C2orf78A6NCI8 922 aa18.07■□□□□ 0.48
CDH3-205ENST00000566808 ADAM23O75077 832 aa18.07■□□□□ 0.48
CDH3-205ENST00000566808 KAT7O95251 611 aa18.07■□□□□ 0.48
CDH3-205ENST00000566808 PIGRP01833 764 aa18.07■□□□□ 0.48
CDH3-205ENST00000566808 PFKLP17858 780 aa18.07■□□□□ 0.48
CDH3-205ENST00000566808 SCP2P22307 547 aa18.07■□□□□ 0.48
CDH3-205ENST00000566808 KIR2DL1P43626 348 aaPredicted RBP18.07■□□□□ 0.48
CDH3-205ENST00000566808 NCKAP1LP55160 1127 aa18.07■□□□□ 0.48
CDH3-205ENST00000566808 RAD51AP2Q09MP3 1159 aa18.07■□□□□ 0.48
CDH3-205ENST00000566808 DDR2Q16832 855 aa18.07■□□□□ 0.48
CDH3-205ENST00000566808 SV2CQ496J9 727 aa18.07■□□□□ 0.48
CDH3-205ENST00000566808 TOGARAM2Q6ZUX3 1019 aa18.07■□□□□ 0.48
CDH3-205ENST00000566808 KCNK18Q7Z418 384 aa18.07■□□□□ 0.48
CDH3-205ENST00000566808 SFTPA1Q8IWL2 248 aa18.07■□□□□ 0.48
CDH3-205ENST00000566808 PNKPQ96T60 521 aa18.07■□□□□ 0.48
CDH3-205ENST00000566808 CPSF3Q9UKF6 684 aaKnown RBP18.07■□□□□ 0.48
CDH3-205ENST00000566808 PTPRQQ9UMZ3 2332 aa18.06■□□□□ 0.48
CDH3-205ENST00000566808 MYO18BQ8IUG5 2567 aa18.06■□□□□ 0.48
CDH3-205ENST00000566808 A0A0B4J269 797 aa18.06■□□□□ 0.48
CDH3-205ENST00000566808 JAK2O60674 1132 aa18.06■□□□□ 0.48
CDH3-205ENST00000566808 HDCP19113 662 aa18.06■□□□□ 0.48
CDH3-205ENST00000566808 TRAPPC10P48553 1259 aa18.06■□□□□ 0.48
CDH3-205ENST00000566808 RESTQ13127 1097 aa18.06■□□□□ 0.48
CDH3-205ENST00000566808 C4orf32Q8N8J7 132 aa18.06■□□□□ 0.48
CDH3-205ENST00000566808 ZNF560Q96MR9 790 aa18.06■□□□□ 0.48
CDH3-205ENST00000566808 MSTO1Q9BUK6 570 aa18.06■□□□□ 0.48
CDH3-205ENST00000566808 ASB7Q9H672 318 aa18.06■□□□□ 0.48
CDH3-205ENST00000566808 KCND2Q9NZV8 630 aa18.06■□□□□ 0.48
CDH3-205ENST00000566808 LARSQ9P2J5 1176 aaKnown RBP18.06■□□□□ 0.48
CDH3-205ENST00000566808 SUSD2Q9UGT4 822 aa18.06■□□□□ 0.48
CDH3-205ENST00000566808 A0A087WV48 116 aa18.05■□□□□ 0.48
CDH3-205ENST00000566808 KPNA7A9QM74 516 aa18.05■□□□□ 0.48
CDH3-205ENST00000566808 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.05■□□□□ 0.48
CDH3-205ENST00000566808 LEFTY2O00292 366 aa18.05■□□□□ 0.48
CDH3-205ENST00000566808 SLC9A3R1O14745 358 aaPredicted RBP18.05■□□□□ 0.48
CDH3-205ENST00000566808 CYP2F1P24903 491 aa18.05■□□□□ 0.48
CDH3-205ENST00000566808 GRIA2P42262 883 aa18.05■□□□□ 0.48
CDH3-205ENST00000566808 MESP2Q0VG99 397 aa18.05■□□□□ 0.48
CDH3-205ENST00000566808 ME3Q16798 604 aa18.05■□□□□ 0.48
CDH3-205ENST00000566808 PLEKHG6Q3KR16 790 aa18.05■□□□□ 0.48
CDH3-205ENST00000566808 CFAP221Q4G0U5 840 aa18.05■□□□□ 0.48
CDH3-205ENST00000566808 TRMT11Q7Z4G4 463 aaKnown RBP18.05■□□□□ 0.48
CDH3-205ENST00000566808 FILIP1Q7Z7B0 1213 aa18.05■□□□□ 0.48
CDH3-205ENST00000566808 HSPA12BQ96MM6 686 aa18.05■□□□□ 0.48
CDH3-205ENST00000566808 FOXP1Q9H334 677 aaPredicted RBP18.05■□□□□ 0.48
CDH3-205ENST00000566808 FAM124BQ9H5Z6 455 aaPredicted RBP18.05■□□□□ 0.48
CDH3-205ENST00000566808 ARHGEF4Q9NR80 690 aa18.05■□□□□ 0.48
CDH3-205ENST00000566808 CALCOCO1Q9P1Z2 691 aa18.05■□□□□ 0.48
CDH3-205ENST00000566808 SPTA1P02549 2419 aa18.04■□□□□ 0.48
CDH3-205ENST00000566808 HECTD1Q9ULT8 2610 aa18.04■□□□□ 0.48
CDH3-205ENST00000566808 A0A0A0MRY4 1105 aa18.04■□□□□ 0.48
CDH3-205ENST00000566808 PP2D1A8MPX8 630 aa18.04■□□□□ 0.48
CDH3-205ENST00000566808 TK2O00142 265 aa18.04■□□□□ 0.48
CDH3-205ENST00000566808 ADH1CP00326 375 aa18.04■□□□□ 0.48
CDH3-205ENST00000566808 GABRG2P18507 467 aa18.04■□□□□ 0.48
CDH3-205ENST00000566808 TNFRSF4P43489 277 aa18.04■□□□□ 0.48
CDH3-205ENST00000566808 GUCY1B3Q02153 619 aa18.04■□□□□ 0.48
CDH3-205ENST00000566808 KDSRQ06136 332 aa18.04■□□□□ 0.48
CDH3-205ENST00000566808 DHCR24Q15392 516 aa18.04■□□□□ 0.48
CDH3-205ENST00000566808 INTS6LQ5JSJ4 861 aaKnown RBP18.04■□□□□ 0.48
CDH3-205ENST00000566808 SLC41A1Q8IVJ1 513 aa18.04■□□□□ 0.48
CDH3-205ENST00000566808 SCUBE3Q8IX30 993 aa18.04■□□□□ 0.48
CDH3-205ENST00000566808 DEFB119Q8N690 84 aa18.04■□□□□ 0.48
CDH3-205ENST00000566808 ACBD6Q9BR61 282 aa18.04■□□□□ 0.48
CDH3-205ENST00000566808 ZDHHC5Q9C0B5 715 aa18.04■□□□□ 0.48
CDH3-205ENST00000566808 DPP3Q9NY33 737 aa18.04■□□□□ 0.48
CDH3-205ENST00000566808 KIAA1522Q9P206 1035 aaPredicted RBP18.04■□□□□ 0.48
CDH3-205ENST00000566808 IGHV1OR15-9A0A0B4J2B8 117 aa18.03■□□□□ 0.48
CDH3-205ENST00000566808 CBFA2T3O75081 653 aa18.03■□□□□ 0.48
CDH3-205ENST00000566808 PNPLA4P41247 253 aa18.03■□□□□ 0.48
CDH3-205ENST00000566808 SLC6A11P48066 632 aa18.03■□□□□ 0.48
CDH3-205ENST00000566808 ZXDBP98169 803 aa18.03■□□□□ 0.48
CDH3-205ENST00000566808 ATP2C1P98194 919 aaPredicted RBP18.03■□□□□ 0.48
CDH3-205ENST00000566808 TMPRSS7Q7RTY8 843 aa18.03■□□□□ 0.48
CDH3-205ENST00000566808 C12orf40Q86WS4 652 aa18.03■□□□□ 0.48
CDH3-205ENST00000566808 PDCL2Q8N4E4 241 aa18.03■□□□□ 0.48
CDH3-205ENST00000566808 TRIML1Q8N9V2 468 aa18.03■□□□□ 0.48
CDH3-205ENST00000566808 KCNV2Q8TDN2 545 aa18.03■□□□□ 0.48
CDH3-205ENST00000566808 LRRC15Q8TF66 581 aa18.03■□□□□ 0.48
CDH3-205ENST00000566808 FUBP3Q96I24 572 aaKnown RBP eCLIP18.03■□□□□ 0.48
CDH3-205ENST00000566808 PKMYT1Q99640 499 aa18.03■□□□□ 0.48
CDH3-205ENST00000566808 ZDHHC4Q9NPG8 344 aa18.03■□□□□ 0.48
CDH3-205ENST00000566808 PCOLCE2Q9UKZ9 415 aa18.03■□□□□ 0.48
CDH3-205ENST00000566808 NOL7Q9UMY1 257 aaKnown RBP18.03■□□□□ 0.48
CDH3-205ENST00000566808 ZNF217O75362 1048 aa18.02■□□□□ 0.48
CDH3-205ENST00000566808 ADH5P11766 374 aa18.02■□□□□ 0.48
CDH3-205ENST00000566808 GNSP15586 552 aa18.02■□□□□ 0.48
CDH3-205ENST00000566808 MYL7Q01449 175 aa18.02■□□□□ 0.48
CDH3-205ENST00000566808 GRIK2Q13002 908 aa18.02■□□□□ 0.48
CDH3-205ENST00000566808 EMC10Q5UCC4 262 aa18.02■□□□□ 0.48
CDH3-205ENST00000566808 SLCO6A1Q86UG4 719 aa18.02■□□□□ 0.48
CDH3-205ENST00000566808 SPATA2LQ8IUW3 424 aaPredicted RBP18.02■□□□□ 0.48
CDH3-205ENST00000566808 ADGRG2Q8IZP9 1017 aa18.02■□□□□ 0.48
CDH3-205ENST00000566808 KCTD17Q8N5Z5 321 aa18.02■□□□□ 0.48
CDH3-205ENST00000566808 SYT2Q8N9I0 419 aaPredicted RBP18.02■□□□□ 0.48
CDH3-205ENST00000566808 MMTAG2Q9BU76 263 aaKnown RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms