RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 FAM13BQ9NYF5 915 aa16■□□□□ 0.15
RNF40-209ENST00000566703 PCDHGA5Q9Y5G8 931 aa16■□□□□ 0.15
RNF40-209ENST00000566703 WNT6Q9Y6F9 365 aa16■□□□□ 0.15
RNF40-209ENST00000566703 DENND4CQ5VZ89 1909 aa16■□□□□ 0.15
RNF40-209ENST00000566703 KIF26AQ9ULI4 1882 aaPredicted RBP15.99■□□□□ 0.15
RNF40-209ENST00000566703 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.99■□□□□ 0.15
RNF40-209ENST00000566703 DCDC2BA2VCK2 349 aa15.99■□□□□ 0.15
RNF40-209ENST00000566703 ZNF840PA6NDX5 716 aa15.99■□□□□ 0.15
RNF40-209ENST00000566703 CLIC2O15247 247 aa15.99■□□□□ 0.15
RNF40-209ENST00000566703 NFATC1O95644 943 aa15.99■□□□□ 0.15
RNF40-209ENST00000566703 PTPN1P18031 435 aaKnown RBP15.99■□□□□ 0.15
RNF40-209ENST00000566703 RAP1GAPP47736 663 aa15.99■□□□□ 0.15
RNF40-209ENST00000566703 CYP2J2P51589 502 aa15.99■□□□□ 0.15
RNF40-209ENST00000566703 AP3M2P53677 418 aa15.99■□□□□ 0.15
RNF40-209ENST00000566703 TNNC1P63316 161 aa15.99■□□□□ 0.15
RNF40-209ENST00000566703 SLC7A9P82251 487 aa15.99■□□□□ 0.15
RNF40-209ENST00000566703 TRPC3Q13507 836 aa15.99■□□□□ 0.15
RNF40-209ENST00000566703 KNOP1Q1ED39 458 aaKnown RBP15.99■□□□□ 0.15
RNF40-209ENST00000566703 WDR72Q3MJ13 1102 aa15.99■□□□□ 0.15
RNF40-209ENST00000566703 OR6B3Q8NGW1 331 aa15.99■□□□□ 0.15
RNF40-209ENST00000566703 GOLGA5Q8TBA6 731 aa15.99■□□□□ 0.15
RNF40-209ENST00000566703 DDX1Q92499 740 aaKnown RBP15.99■□□□□ 0.15
RNF40-209ENST00000566703 ZNF516Q92618 1163 aa15.99■□□□□ 0.15
RNF40-209ENST00000566703 ACDQ96AP0 544 aa15.99■□□□□ 0.15
RNF40-209ENST00000566703 CCDC127Q96BQ5 260 aa15.99■□□□□ 0.15
RNF40-209ENST00000566703 ELOVL4Q9GZR5 314 aa15.99■□□□□ 0.15
RNF40-209ENST00000566703 LINC00597Q9H2U6 94 aa15.99■□□□□ 0.15
RNF40-209ENST00000566703 VRTNQ9H8Y1 702 aa15.99■□□□□ 0.15
RNF40-209ENST00000566703 DCHS1Q96JQ0 3298 aa15.99■□□□□ 0.15
RNF40-209ENST00000566703 CACNA1AO00555 2505 aa15.98■□□□□ 0.15
RNF40-209ENST00000566703 SLC9A3R1O14745 358 aaPredicted RBP15.98■□□□□ 0.15
RNF40-209ENST00000566703 AXIN1O15169 862 aa15.98■□□□□ 0.15
RNF40-209ENST00000566703 EPN2O95208 641 aa15.98■□□□□ 0.15
RNF40-209ENST00000566703 ZNF806P0C7X5 589 aa15.98■□□□□ 0.15
RNF40-209ENST00000566703 CCDC192P0DO97 292 aa15.98■□□□□ 0.15
RNF40-209ENST00000566703 HOXC13P31276 330 aa15.98■□□□□ 0.15
RNF40-209ENST00000566703 LIMK1P53667 647 aa15.98■□□□□ 0.15
RNF40-209ENST00000566703 MDH1BQ5I0G3 518 aa15.98■□□□□ 0.15
RNF40-209ENST00000566703 TDRD10Q5VZ19 366 aaKnown RBP15.98■□□□□ 0.15
RNF40-209ENST00000566703 NELFCDQ8IXH7 590 aa15.98■□□□□ 0.15
RNF40-209ENST00000566703 TMEM174Q8WUU8 243 aa15.98■□□□□ 0.15
RNF40-209ENST00000566703 SYAP1Q96A49 352 aaPredicted RBP15.98■□□□□ 0.15
RNF40-209ENST00000566703 EBF1Q9UH73 591 aa15.98■□□□□ 0.15
RNF40-209ENST00000566703 CFAP45Q9UL16 551 aa15.98■□□□□ 0.15
RNF40-209ENST00000566703 PCDHA7Q9UN72 937 aa15.98■□□□□ 0.15
RNF40-209ENST00000566703 NME7Q9Y5B8 376 aa15.98■□□□□ 0.15
RNF40-209ENST00000566703 F8VP50 259 aa15.97■□□□□ 0.15
RNF40-209ENST00000566703 OLFM2O95897 454 aa15.97■□□□□ 0.15
RNF40-209ENST00000566703 ZSCAN22P10073 491 aaPredicted RBP15.97■□□□□ 0.15
RNF40-209ENST00000566703 PXNP49023 591 aaPredicted RBP15.97■□□□□ 0.15
RNF40-209ENST00000566703 USP46P62068 366 aa15.97■□□□□ 0.15
RNF40-209ENST00000566703 CLDN10P78369 228 aa15.97■□□□□ 0.15
RNF40-209ENST00000566703 PSMD2Q13200 908 aa15.97■□□□□ 0.15
RNF40-209ENST00000566703 DMC1Q14565 340 aa15.97■□□□□ 0.15
RNF40-209ENST00000566703 KBTBD6Q86V97 674 aa15.97■□□□□ 0.15
RNF40-209ENST00000566703 ADGRG2Q8IZP9 1017 aa15.97■□□□□ 0.15
RNF40-209ENST00000566703 RPLP0P6Q8NHW5 317 aa15.97■□□□□ 0.15
RNF40-209ENST00000566703 EZH1Q92800 747 aaPredicted RBP15.97■□□□□ 0.15
RNF40-209ENST00000566703 SLITRK1Q96PX8 696 aa15.97■□□□□ 0.15
RNF40-209ENST00000566703 GZF1Q9H116 711 aaPredicted RBP15.97■□□□□ 0.15
RNF40-209ENST00000566703 XYLT2Q9H1B5 865 aa15.97■□□□□ 0.15
RNF40-209ENST00000566703 ARRDC1-AS1Q9H2J1 176 aa15.97■□□□□ 0.15
RNF40-209ENST00000566703 SLC39A2Q9NP94 309 aa15.97■□□□□ 0.15
RNF40-209ENST00000566703 CEP250Q9BV73 2442 aa15.97■□□□□ 0.15
RNF40-209ENST00000566703 A8MXQ7 604 aa15.96■□□□□ 0.15
RNF40-209ENST00000566703 LEFTY2O00292 366 aa15.96■□□□□ 0.15
RNF40-209ENST00000566703 EXOC3O60645 756 aa15.96■□□□□ 0.15
RNF40-209ENST00000566703 PHACTR2O75167 634 aa15.96■□□□□ 0.15
RNF40-209ENST00000566703 RTN3O95197 1032 aaPredicted RBP15.96■□□□□ 0.15
RNF40-209ENST00000566703 APBB3O95704 486 aa15.96■□□□□ 0.15
RNF40-209ENST00000566703 F13A1P00488 732 aa15.96■□□□□ 0.15
RNF40-209ENST00000566703 ME1P48163 572 aa15.96■□□□□ 0.15
RNF40-209ENST00000566703 MYL6P60660 151 aa15.96■□□□□ 0.15
RNF40-209ENST00000566703 ZXDBP98169 803 aa15.96■□□□□ 0.15
RNF40-209ENST00000566703 TAF10Q12962 218 aa15.96■□□□□ 0.15
RNF40-209ENST00000566703 PLA2G2CQ5R387 149 aa15.96■□□□□ 0.15
RNF40-209ENST00000566703 RESP18Q5W5W9 173 aa15.96■□□□□ 0.15
RNF40-209ENST00000566703 NAIF1Q69YI7 327 aaPredicted RBP15.96■□□□□ 0.15
RNF40-209ENST00000566703 DDX42Q86XP3 938 aaKnown RBP eCLIP15.96■□□□□ 0.15
RNF40-209ENST00000566703 SLC9A9Q8IVB4 645 aa15.96■□□□□ 0.15
RNF40-209ENST00000566703 NUP93Q8N1F7 819 aa15.96■□□□□ 0.15
RNF40-209ENST00000566703 B3GALNT2Q8NCR0 500 aa15.96■□□□□ 0.15
RNF40-209ENST00000566703 TTC16Q8NEE8 873 aa15.96■□□□□ 0.15
RNF40-209ENST00000566703 PDZD8Q8NEN9 1154 aa15.96■□□□□ 0.15
RNF40-209ENST00000566703 OVCA2Q8WZ82 227 aa15.96■□□□□ 0.15
RNF40-209ENST00000566703 B3GNT5Q9BYG0 378 aa15.96■□□□□ 0.15
RNF40-209ENST00000566703 RNF38Q9H0F5 515 aa15.96■□□□□ 0.15
RNF40-209ENST00000566703 BLZF1Q9H2G9 400 aa15.96■□□□□ 0.15
RNF40-209ENST00000566703 DMAC2Q9NW81 257 aa15.96■□□□□ 0.15
RNF40-209ENST00000566703 COMMD8Q9NX08 183 aa15.96■□□□□ 0.15
RNF40-209ENST00000566703 NXF1Q9UBU9 619 aaKnown RBP15.96■□□□□ 0.15
RNF40-209ENST00000566703 RCOR1Q9UKL0 485 aa15.96■□□□□ 0.15
RNF40-209ENST00000566703 ZNF638Q14966 1978 aaKnown RBP15.95■□□□□ 0.14
RNF40-209ENST00000566703 RHOBTB1O94844 696 aa15.95■□□□□ 0.14
RNF40-209ENST00000566703 OAS1P00973 400 aaKnown RBP15.95■□□□□ 0.14
RNF40-209ENST00000566703 ADRB1P08588 477 aa15.95■□□□□ 0.14
RNF40-209ENST00000566703 SLFN14P0C7P3 912 aa15.95■□□□□ 0.14
RNF40-209ENST00000566703 YWHAQP27348 245 aa15.95■□□□□ 0.14
RNF40-209ENST00000566703 OPRD1P41143 372 aa15.95■□□□□ 0.14
RNF40-209ENST00000566703 AFMP43652 599 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms