RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 SPAG5Q96R06 1193 aa8.65□□□□□ -1.02
CDH13-208ENST00000566333 KCNK16Q96T55 309 aa8.65□□□□□ -1.02
CDH13-208ENST00000566333 MED10Q9BTT4 135 aa8.65□□□□□ -1.02
CDH13-208ENST00000566333 TRIM5Q9C035 493 aa8.65□□□□□ -1.02
CDH13-208ENST00000566333 ZNF334Q9HCZ1 680 aaPredicted RBP8.65□□□□□ -1.02
CDH13-208ENST00000566333 HCFC1R1Q9NWW0 138 aa8.65□□□□□ -1.02
CDH13-208ENST00000566333 DPP7Q9UHL4 492 aa8.65□□□□□ -1.02
CDH13-208ENST00000566333 CYTH4Q9UIA0 394 aa8.65□□□□□ -1.02
CDH13-208ENST00000566333 CD207Q9UJ71 328 aa8.65□□□□□ -1.02
CDH13-208ENST00000566333 MYO6Q9UM54 1294 aa8.65□□□□□ -1.02
CDH13-208ENST00000566333 USP15Q9Y4E8 981 aaPredicted RBP8.65□□□□□ -1.02
CDH13-208ENST00000566333 CLUHO75153 1309 aa8.64□□□□□ -1.03
CDH13-208ENST00000566333 M0QYV0 167 aa8.64□□□□□ -1.03
CDH13-208ENST00000566333 TRIM66O15016 1216 aa8.64□□□□□ -1.03
CDH13-208ENST00000566333 THAP12O43422 761 aa8.64□□□□□ -1.03
CDH13-208ENST00000566333 GABBR2O75899 941 aa8.64□□□□□ -1.03
CDH13-208ENST00000566333 LRG1P02750 347 aa8.64□□□□□ -1.03
CDH13-208ENST00000566333 CHRNB2P17787 502 aa8.64□□□□□ -1.03
CDH13-208ENST00000566333 CCR2P41597 374 aa8.64□□□□□ -1.03
CDH13-208ENST00000566333 STAT1P42224 750 aa8.64□□□□□ -1.03
CDH13-208ENST00000566333 PLA2G4AP47712 749 aa8.64□□□□□ -1.03
CDH13-208ENST00000566333 TUFMP49411 452 aaKnown RBP8.64□□□□□ -1.03
CDH13-208ENST00000566333 PDE6CP51160 858 aa8.64□□□□□ -1.03
CDH13-208ENST00000566333 SLC5A3P53794 718 aa8.64□□□□□ -1.03
CDH13-208ENST00000566333 MAP3K7CLP57077 242 aa8.64□□□□□ -1.03
CDH13-208ENST00000566333 RPL10AP62906 217 aaKnown RBP8.64□□□□□ -1.03
CDH13-208ENST00000566333 NTHL1P78549 312 aa8.64□□□□□ -1.03
CDH13-208ENST00000566333 PLCB2Q00722 1185 aa8.64□□□□□ -1.03
CDH13-208ENST00000566333 FMO1Q01740 532 aa8.64□□□□□ -1.03
CDH13-208ENST00000566333 ITIH3Q06033 890 aa8.64□□□□□ -1.03
CDH13-208ENST00000566333 PDE4CQ08493 712 aa8.64□□□□□ -1.03
CDH13-208ENST00000566333 BST2Q10589 180 aaKnown RBP8.64□□□□□ -1.03
CDH13-208ENST00000566333 PLD1Q13393 1074 aa8.64□□□□□ -1.03
CDH13-208ENST00000566333 SMAD4Q13485 552 aaKnown RBP8.64□□□□□ -1.03
CDH13-208ENST00000566333 STILQ15468 1287 aa8.64□□□□□ -1.03
CDH13-208ENST00000566333 CNGA2Q16280 664 aa8.64□□□□□ -1.03
CDH13-208ENST00000566333 LEXMQ3ZCV2 418 aa8.64□□□□□ -1.03
CDH13-208ENST00000566333 DENND1BQ6P3S1 775 aa8.64□□□□□ -1.03
CDH13-208ENST00000566333 ELMSAN1Q6PJG2 1045 aa8.64□□□□□ -1.03
CDH13-208ENST00000566333 EP400NLQ6ZTU2 488 aa8.64□□□□□ -1.03
CDH13-208ENST00000566333 CACNA2D4Q7Z3S7 1137 aa8.64□□□□□ -1.03
CDH13-208ENST00000566333 TMEM150AQ86TG1 271 aa8.64□□□□□ -1.03
CDH13-208ENST00000566333 SCN4BQ8IWT1 228 aa8.64□□□□□ -1.03
CDH13-208ENST00000566333 HS6ST3Q8IZP7 471 aa8.64□□□□□ -1.03
CDH13-208ENST00000566333 ANKRD52Q8NB46 1076 aa8.64□□□□□ -1.03
CDH13-208ENST00000566333 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.64□□□□□ -1.03
CDH13-208ENST00000566333 GIPC2Q8TF65 315 aa8.64□□□□□ -1.03
CDH13-208ENST00000566333 ZNF606Q8WXB4 792 aa8.64□□□□□ -1.03
CDH13-208ENST00000566333 SMG7Q92540 1137 aaKnown RBP8.64□□□□□ -1.03
CDH13-208ENST00000566333 IQCDQ96DY2 449 aa8.64□□□□□ -1.03
CDH13-208ENST00000566333 TRMT2BQ96GJ1 504 aaKnown RBP8.64□□□□□ -1.03
CDH13-208ENST00000566333 CEP295NLQ96MC4 621 aa8.64□□□□□ -1.03
CDH13-208ENST00000566333 TTLL2Q9BWV7 592 aa8.64□□□□□ -1.03
CDH13-208ENST00000566333 DUSP16Q9BY84 665 aa8.64□□□□□ -1.03
CDH13-208ENST00000566333 EDEM3Q9BZQ6 932 aa8.64□□□□□ -1.03
CDH13-208ENST00000566333 ADAM7Q9H2U9 754 aa8.64□□□□□ -1.03
CDH13-208ENST00000566333 IL21Q9HBE4 155 aa8.64□□□□□ -1.03
CDH13-208ENST00000566333 PNPLA8Q9NP80 782 aa8.64□□□□□ -1.03
CDH13-208ENST00000566333 DNMT3BQ9UBC3 853 aaKnown RBP8.64□□□□□ -1.03
CDH13-208ENST00000566333 KIAA1257Q9ULG3 409 aa8.64□□□□□ -1.03
CDH13-208ENST00000566333 CAPN11Q9UMQ6 739 aa8.64□□□□□ -1.03
CDH13-208ENST00000566333 PCDHGC3Q9UN70 934 aa8.64□□□□□ -1.03
CDH13-208ENST00000566333 COG5Q9UP83 839 aa8.64□□□□□ -1.03
CDH13-208ENST00000566333 NCANO14594 1321 aa8.63□□□□□ -1.03
CDH13-208ENST00000566333 FAM92AA1XBS5 289 aa8.63□□□□□ -1.03
CDH13-208ENST00000566333 SLC38A8A6NNN8 435 aa8.63□□□□□ -1.03
CDH13-208ENST00000566333 XPO1O14980 1071 aaKnown RBP8.63□□□□□ -1.03
CDH13-208ENST00000566333 MBTPS2O43462 519 aa8.63□□□□□ -1.03
CDH13-208ENST00000566333 MFAP3LO75121 409 aa8.63□□□□□ -1.03
CDH13-208ENST00000566333 XYLBO75191 536 aa8.63□□□□□ -1.03
CDH13-208ENST00000566333 MOSPD3O75425 235 aa8.63□□□□□ -1.03
CDH13-208ENST00000566333 RHOP08100 348 aa8.63□□□□□ -1.03
CDH13-208ENST00000566333 SETSIPP0DME0 302 aa8.63□□□□□ -1.03
CDH13-208ENST00000566333 CASP14P31944 242 aa8.63□□□□□ -1.03
CDH13-208ENST00000566333 CDH5P33151 784 aaPredicted RBP8.63□□□□□ -1.03
CDH13-208ENST00000566333 GRIK1P39086 918 aa8.63□□□□□ -1.03
CDH13-208ENST00000566333 PRKCIP41743 596 aa8.63□□□□□ -1.03
CDH13-208ENST00000566333 GPD2P43304 727 aa8.63□□□□□ -1.03
CDH13-208ENST00000566333 ALDH1A3P47895 512 aa8.63□□□□□ -1.03
CDH13-208ENST00000566333 EPHB3P54753 998 aa8.63□□□□□ -1.03
CDH13-208ENST00000566333 ZBED6P86452 979 aa8.63□□□□□ -1.03
CDH13-208ENST00000566333 ARID5AQ03989 594 aa8.63□□□□□ -1.03
CDH13-208ENST00000566333 PTK2Q05397 1052 aa8.63□□□□□ -1.03
CDH13-208ENST00000566333 GOLGA8FQ08AF8 430 aa8.63□□□□□ -1.03
CDH13-208ENST00000566333 GOLGA8DPQ0D2H9 430 aa8.63□□□□□ -1.03
CDH13-208ENST00000566333 TRIM14Q14142 442 aa8.63□□□□□ -1.03
CDH13-208ENST00000566333 RAB41Q5JT25 222 aa8.63□□□□□ -1.03
CDH13-208ENST00000566333 PRSS36Q5K4E3 855 aa8.63□□□□□ -1.03
CDH13-208ENST00000566333 TAF3Q5VWG9 929 aa8.63□□□□□ -1.03
CDH13-208ENST00000566333 HGSNATQ68CP4 663 aa8.63□□□□□ -1.03
CDH13-208ENST00000566333 POTEHQ6S545 545 aa8.63□□□□□ -1.03
CDH13-208ENST00000566333 CYP26C1Q6V0L0 522 aa8.63□□□□□ -1.03
CDH13-208ENST00000566333 GAREM2Q75VX8 874 aa8.63□□□□□ -1.03
CDH13-208ENST00000566333 BHLHA9Q7RTU4 235 aa8.63□□□□□ -1.03
CDH13-208ENST00000566333 TMC6Q7Z403 805 aa8.63□□□□□ -1.03
CDH13-208ENST00000566333 IRF2BP2Q7Z5L9 587 aa8.63□□□□□ -1.03
CDH13-208ENST00000566333 GRASPQ7Z6J2 395 aaPredicted RBP8.63□□□□□ -1.03
CDH13-208ENST00000566333 PIGZQ86VD9 579 aa8.63□□□□□ -1.03
CDH13-208ENST00000566333 PASD1Q8IV76 773 aa8.63□□□□□ -1.03
CDH13-208ENST00000566333 SCAMP5Q8TAC9 235 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms