RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 RPS12P25398 132 aaKnown RBP4.91□□□□□ -1.62
LINC00561-201ENST00000565815 TM4SF4P48230 202 aa4.91□□□□□ -1.62
LINC00561-201ENST00000565815 TOB1P50616 345 aaPredicted RBP4.91□□□□□ -1.62
LINC00561-201ENST00000565815 CASP5P51878 434 aa4.91□□□□□ -1.62
LINC00561-201ENST00000565815 RABGGTBP53611 331 aa4.91□□□□□ -1.62
LINC00561-201ENST00000565815 EPHB4P54760 987 aa4.91□□□□□ -1.62
LINC00561-201ENST00000565815 CLRN1P58418 232 aa4.91□□□□□ -1.62
LINC00561-201ENST00000565815 BMT2Q1RMZ1 405 aa4.91□□□□□ -1.62
LINC00561-201ENST00000565815 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.91□□□□□ -1.62
LINC00561-201ENST00000565815 NBPF5PQ86XG9 351 aaPredicted RBP4.91□□□□□ -1.62
LINC00561-201ENST00000565815 TMEM151BQ8IW70 566 aa4.91□□□□□ -1.62
LINC00561-201ENST00000565815 ZFPM1Q8IX07 1006 aa4.91□□□□□ -1.62
LINC00561-201ENST00000565815 MPP5Q8N3R9 675 aa4.91□□□□□ -1.62
LINC00561-201ENST00000565815 SLC17A8Q8NDX2 589 aa4.91□□□□□ -1.62
LINC00561-201ENST00000565815 BHLHE22Q8NFJ8 381 aaPredicted RBP4.91□□□□□ -1.62
LINC00561-201ENST00000565815 MARS2Q96GW9 593 aaKnown RBP4.91□□□□□ -1.62
LINC00561-201ENST00000565815 RIPOR3Q96MK2 946 aa4.91□□□□□ -1.62
LINC00561-201ENST00000565815 IMPG2Q9BZV3 1241 aa4.91□□□□□ -1.62
LINC00561-201ENST00000565815 AKAP11Q9UKA4 1901 aa4.91□□□□□ -1.62
LINC00561-201ENST00000565815 HEG1Q9ULI3 1381 aa4.91□□□□□ -1.62
LINC00561-201ENST00000565815 NRP1O14786 923 aa4.91□□□□□ -1.62
LINC00561-201ENST00000565815 CAMTA2O94983 1202 aa4.91□□□□□ -1.62
LINC00561-201ENST00000565815 HRGP04196 525 aa4.91□□□□□ -1.62
LINC00561-201ENST00000565815 INHBBP09529 407 aa4.91□□□□□ -1.62
LINC00561-201ENST00000565815 CACNB3P54284 484 aa4.91□□□□□ -1.62
LINC00561-201ENST00000565815 ATXN7L2Q5T6C5 722 aaPredicted RBP4.91□□□□□ -1.62
LINC00561-201ENST00000565815 OTUD7BQ6GQQ9 843 aa4.91□□□□□ -1.62
LINC00561-201ENST00000565815 CCDC33Q8N5R6 958 aa4.91□□□□□ -1.62
LINC00561-201ENST00000565815 OR56A3Q8NH54 315 aa4.91□□□□□ -1.62
LINC00561-201ENST00000565815 CYFIP2Q96F07 1278 aa4.91□□□□□ -1.62
LINC00561-201ENST00000565815 SGCZQ96LD1 299 aa4.91□□□□□ -1.62
LINC00561-201ENST00000565815 SMURF2Q9HAU4 748 aa4.91□□□□□ -1.62
LINC00561-201ENST00000565815 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.91□□□□□ -1.62
LINC00561-201ENST00000565815 RNF186Q9NXI6 227 aa4.91□□□□□ -1.62
LINC00561-201ENST00000565815 SLC16A6O15403 523 aa4.9□□□□□ -1.62
LINC00561-201ENST00000565815 PHGDHO43175 533 aaKnown RBP4.9□□□□□ -1.62
LINC00561-201ENST00000565815 ABHD16AO95870 558 aa4.9□□□□□ -1.62
LINC00561-201ENST00000565815 ERBB2P04626 1255 aa4.9□□□□□ -1.62
LINC00561-201ENST00000565815 KCNJ5P48544 419 aa4.9□□□□□ -1.62
LINC00561-201ENST00000565815 SOX10P56693 466 aa4.9□□□□□ -1.62
LINC00561-201ENST00000565815 SLC13A2Q13183 592 aa4.9□□□□□ -1.62
LINC00561-201ENST00000565815 CNGA2Q16280 664 aa4.9□□□□□ -1.62
LINC00561-201ENST00000565815 PABPC1LQ4VXU2 614 aaKnown RBP4.9□□□□□ -1.62
LINC00561-201ENST00000565815 METRNLQ641Q3 311 aa4.9□□□□□ -1.62
LINC00561-201ENST00000565815 HIBCHQ6NVY1 386 aaPredicted RBP4.9□□□□□ -1.62
LINC00561-201ENST00000565815 SEM1Q6ZVN7 128 aa4.9□□□□□ -1.62
LINC00561-201ENST00000565815 ZNF280BQ86YH2 543 aa4.9□□□□□ -1.62
LINC00561-201ENST00000565815 SP8Q8IXZ3 490 aa4.9□□□□□ -1.62
LINC00561-201ENST00000565815 OR2C3Q8N628 320 aa4.9□□□□□ -1.62
LINC00561-201ENST00000565815 SLC15A4Q8N697 577 aa4.9□□□□□ -1.62
LINC00561-201ENST00000565815 LPPQ93052 612 aa4.9□□□□□ -1.62
LINC00561-201ENST00000565815 APIPQ96GX9 242 aa4.9□□□□□ -1.62
LINC00561-201ENST00000565815 TRIM54Q9BYV2 358 aa4.9□□□□□ -1.62
LINC00561-201ENST00000565815 TTYH3Q9C0H2 523 aa4.9□□□□□ -1.62
LINC00561-201ENST00000565815 TINAGL1Q9GZM7 467 aaPredicted RBP4.9□□□□□ -1.62
LINC00561-201ENST00000565815 ZNF768Q9H5H4 540 aaKnown RBP4.9□□□□□ -1.62
LINC00561-201ENST00000565815 GBA2Q9HCG7 927 aaPredicted RBP4.9□□□□□ -1.62
LINC00561-201ENST00000565815 MOCS1Q9NZB8 636 aa4.9□□□□□ -1.62
LINC00561-201ENST00000565815 MAP3K2Q9Y2U5 619 aa4.9□□□□□ -1.62
LINC00561-201ENST00000565815 BTN3A1O00481 513 aa4.9□□□□□ -1.63
LINC00561-201ENST00000565815 ELANEP08246 267 aa4.9□□□□□ -1.63
LINC00561-201ENST00000565815 GNAT2P19087 354 aa4.9□□□□□ -1.63
LINC00561-201ENST00000565815 ARFIP2P53365 341 aa4.9□□□□□ -1.63
LINC00561-201ENST00000565815 UCP3P55916 312 aa4.9□□□□□ -1.63
LINC00561-201ENST00000565815 HUNKP57058 714 aa4.9□□□□□ -1.63
LINC00561-201ENST00000565815 TRIM14Q14142 442 aa4.9□□□□□ -1.63
LINC00561-201ENST00000565815 POLD3Q15054 466 aaPredicted RBP4.9□□□□□ -1.63
LINC00561-201ENST00000565815 SLFN13Q68D06 897 aa4.9□□□□□ -1.63
LINC00561-201ENST00000565815 ZNF365Q70YC5 407 aa4.9□□□□□ -1.63
LINC00561-201ENST00000565815 KCTD20Q7Z5Y7 419 aa4.9□□□□□ -1.63
LINC00561-201ENST00000565815 MICU3Q86XE3 530 aa4.9□□□□□ -1.63
LINC00561-201ENST00000565815 KRTAP19-1Q8IUB9 90 aa4.9□□□□□ -1.63
LINC00561-201ENST00000565815 PALM2Q8IXS6 379 aa4.9□□□□□ -1.63
LINC00561-201ENST00000565815 D2HGDHQ8N465 521 aa4.9□□□□□ -1.63
LINC00561-201ENST00000565815 RNF152Q8N8N0 203 aa4.9□□□□□ -1.63
LINC00561-201ENST00000565815 OR52N2Q8NGI0 321 aa4.9□□□□□ -1.63
LINC00561-201ENST00000565815 BRIX1Q8TDN6 353 aaKnown RBP4.9□□□□□ -1.63
LINC00561-201ENST00000565815 TOX2Q96NM4 488 aa4.9□□□□□ -1.63
LINC00561-201ENST00000565815 ELAC2Q9BQ52 826 aaKnown RBP4.9□□□□□ -1.63
LINC00561-201ENST00000565815 CALCOCO1Q9P1Z2 691 aa4.9□□□□□ -1.63
LINC00561-201ENST00000565815 HSFX1Q9UBD0 423 aa4.9□□□□□ -1.63
LINC00561-201ENST00000565815 USP15Q9Y4E8 981 aaPredicted RBP4.9□□□□□ -1.63
LINC00561-201ENST00000565815 RIPOR2Q9Y4F9 1068 aa4.9□□□□□ -1.63
LINC00561-201ENST00000565815 A0A1W2PPC1 479 aa4.89□□□□□ -1.63
LINC00561-201ENST00000565815 ANO9A1A5B4 782 aa4.89□□□□□ -1.63
LINC00561-201ENST00000565815 ERVV-1B6SEH8 477 aa4.89□□□□□ -1.63
LINC00561-201ENST00000565815 IL1R1P14778 569 aa4.89□□□□□ -1.63
LINC00561-201ENST00000565815 SCNN1GP51170 649 aa4.89□□□□□ -1.63
LINC00561-201ENST00000565815 ITGA8P53708 1063 aa4.89□□□□□ -1.63
LINC00561-201ENST00000565815 INHBEP58166 350 aa4.89□□□□□ -1.63
LINC00561-201ENST00000565815 SREBF2Q12772 1141 aa4.89□□□□□ -1.63
LINC00561-201ENST00000565815 CRY2Q49AN0 593 aa4.89□□□□□ -1.63
LINC00561-201ENST00000565815 UBXN11Q5T124 520 aa4.89□□□□□ -1.63
LINC00561-201ENST00000565815 ZDHHC24Q6UX98 284 aa4.89□□□□□ -1.63
LINC00561-201ENST00000565815 Q6ZSN1 163 aa4.89□□□□□ -1.63
LINC00561-201ENST00000565815 GPRIN1Q7Z2K8 1008 aa4.89□□□□□ -1.63
LINC00561-201ENST00000565815 EXOC8Q8IYI6 725 aa4.89□□□□□ -1.63
LINC00561-201ENST00000565815 OR10H5Q8NGA6 315 aa4.89□□□□□ -1.63
LINC00561-201ENST00000565815 Q8TCH9 128 aa4.89□□□□□ -1.63
LINC00561-201ENST00000565815 ST8SIA2Q92186 375 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms