RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 LONRF2Q1L5Z9 754 aa3.25□□□□□ -1.89
CHD9-216ENST00000565803 ZACNQ401N2 412 aa3.25□□□□□ -1.89
CHD9-216ENST00000565803 TOR2AQ5JU69 321 aa3.25□□□□□ -1.89
CHD9-216ENST00000565803 AADACL4Q5VUY2 407 aa3.25□□□□□ -1.89
CHD9-216ENST00000565803 MEX3BQ6ZN04 569 aaKnown RBP3.25□□□□□ -1.89
CHD9-216ENST00000565803 ADCK1Q86TW2 530 aa3.25□□□□□ -1.89
CHD9-216ENST00000565803 RTN4RL1Q86UN2 441 aaPredicted RBP3.25□□□□□ -1.89
CHD9-216ENST00000565803 KRT73Q86Y46 540 aa3.25□□□□□ -1.89
CHD9-216ENST00000565803 TMEM151BQ8IW70 566 aa3.25□□□□□ -1.89
CHD9-216ENST00000565803 CCDC83Q8IWF9 413 aa3.25□□□□□ -1.89
CHD9-216ENST00000565803 KLHL7Q8IXQ5 586 aa3.25□□□□□ -1.89
CHD9-216ENST00000565803 TTC5Q8N0Z6 440 aa3.25□□□□□ -1.89
CHD9-216ENST00000565803 TCAIMQ8N3R3 496 aa3.25□□□□□ -1.89
CHD9-216ENST00000565803 RNF10Q8N5U6 811 aaKnown RBP3.25□□□□□ -1.89
CHD9-216ENST00000565803 C7orf57Q8NEG2 295 aa3.25□□□□□ -1.89
CHD9-216ENST00000565803 ANKS1AQ92625 1134 aa3.25□□□□□ -1.89
CHD9-216ENST00000565803 BRF1Q92994 677 aa3.25□□□□□ -1.89
CHD9-216ENST00000565803 COA7Q96BR5 231 aa3.25□□□□□ -1.89
CHD9-216ENST00000565803 MVB12AQ96EY5 273 aa3.25□□□□□ -1.89
CHD9-216ENST00000565803 SCLYQ96I15 445 aa3.25□□□□□ -1.89
CHD9-216ENST00000565803 ZC3H10Q96K80 434 aaKnown RBP3.25□□□□□ -1.89
CHD9-216ENST00000565803 UHRF1Q96T88 793 aaPredicted RBP3.25□□□□□ -1.89
CHD9-216ENST00000565803 RIOK1Q9BRS2 568 aaKnown RBP3.25□□□□□ -1.89
CHD9-216ENST00000565803 FAM192AQ9GZU8 254 aa3.25□□□□□ -1.89
CHD9-216ENST00000565803 MRPL46Q9H2W6 279 aaKnown RBP3.25□□□□□ -1.89
CHD9-216ENST00000565803 MROH8Q9H579 483 aa3.25□□□□□ -1.89
CHD9-216ENST00000565803 ETNK1Q9HBU6 452 aa3.25□□□□□ -1.89
CHD9-216ENST00000565803 WDR6Q9NNW5 1121 aaKnown RBP3.25□□□□□ -1.89
CHD9-216ENST00000565803 DDX43Q9NXZ2 648 aaKnown RBP3.25□□□□□ -1.89
CHD9-216ENST00000565803 ASH2LQ9UBL3 628 aa3.25□□□□□ -1.89
CHD9-216ENST00000565803 TSPYL4Q9UJ04 414 aa3.25□□□□□ -1.89
CHD9-216ENST00000565803 MED16Q9Y2X0 877 aa3.25□□□□□ -1.89
CHD9-216ENST00000565803 TMEM98Q9Y2Y6 226 aa3.25□□□□□ -1.89
CHD9-216ENST00000565803 LACTBL1A8MY62 500 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.24□□□□□ -1.89
CHD9-216ENST00000565803 H3BUI4 141 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 FCHO1O14526 889 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 TP73O15350 636 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 FMO6PO60774 539 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 FKTNO75072 461 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 PPP6R2O75170 966 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 PRDM1O75626 825 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 ITGAVP06756 1048 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 TPBGLP0DKB5 382 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 PLCG1P19174 1290 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 CCT6AP40227 531 aaKnown RBP3.24□□□□□ -1.89
CHD9-216ENST00000565803 BUD31P41223 144 aaPredicted RBP3.24□□□□□ -1.89
CHD9-216ENST00000565803 HSPA7P48741 367 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 PPP5CP53041 499 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 ARFIP1P53367 373 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 EPHB4P54760 987 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 SRSF2Q01130 221 aaKnown RBP3.24□□□□□ -1.89
CHD9-216ENST00000565803 CYP4A11Q02928 519 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 CREB5Q02930 508 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 RPA4Q13156 261 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 ITPK1Q13572 414 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 DOC2AQ14183 400 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 NEDD9Q14511 834 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 RPS6KA2Q15349 733 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 ANGPT1Q15389 498 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 STK11Q15831 433 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 TAZQ16635 292 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 SMU1Q2TAY7 513 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 METTL11BQ5VVY1 283 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 TCERG1LQ5VWI1 586 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 DENND5AQ6IQ26 1287 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.24□□□□□ -1.89
CHD9-216ENST00000565803 SPATA2LQ8IUW3 424 aaPredicted RBP3.24□□□□□ -1.89
CHD9-216ENST00000565803 KIAA2013Q8IYS2 634 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 PHACTR4Q8IZ21 702 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 SYCP3Q8IZU3 236 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 ZNF321PQ8N8H1 164 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 ANKRD53Q8N9V6 530 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 ACMSDQ8TDX5 336 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 PIGOQ8TEQ8 1089 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 SGCDQ92629 289 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 KCNN1Q92952 543 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 CCDC106Q9BWC9 280 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 BRIP1Q9BX63 1249 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 GCOM2Q9BZD3 368 aaPredicted RBP3.24□□□□□ -1.89
CHD9-216ENST00000565803 QRSL1Q9H0R6 528 aaKnown RBP3.24□□□□□ -1.89
CHD9-216ENST00000565803 HAUS4Q9H6D7 363 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 TRIM39Q9HCM9 518 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 ADARB2Q9NS39 739 aaKnown RBP3.24□□□□□ -1.89
CHD9-216ENST00000565803 MRPL15Q9P015 296 aaKnown RBP3.24□□□□□ -1.89
CHD9-216ENST00000565803 ATPIF1Q9UII2 106 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 CLEC4AQ9UMR7 237 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 ATP6V1DQ9Y5K8 247 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 CORINQ9Y5Q5 1042 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 FAM169AQ9Y6X4 670 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 CYP2D7A0A087X1C5 515 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 GNAT3A8MTJ3 354 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 B4E1Z4 1266 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 ZC3H11AO75152 810 aaKnown RBP eCLIP3.24□□□□□ -1.89
CHD9-216ENST00000565803 ZNF254O75437 659 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 CD2BP2O95400 341 aaKnown RBP3.24□□□□□ -1.89
CHD9-216ENST00000565803 INHAP05111 366 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 SFTPCP11686 197 aa3.24□□□□□ -1.89
CHD9-216ENST00000565803 FDPSP14324 419 aaKnown RBP3.24□□□□□ -1.89
CHD9-216ENST00000565803 PDCP20941 246 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms