RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 PPP3CCP48454 512 aa21.18■□□□□ 0.98
CLN6-206ENST00000565471 NCOA4Q13772 614 aa21.18■□□□□ 0.98
CLN6-206ENST00000565471 KCNB1Q14721 858 aa21.18■□□□□ 0.98
CLN6-206ENST00000565471 ZNF667Q5HYK9 610 aa21.18■□□□□ 0.98
CLN6-206ENST00000565471 B3GALNT2Q8NCR0 500 aa21.18■□□□□ 0.98
CLN6-206ENST00000565471 CYP2S1Q96SQ9 504 aa21.18■□□□□ 0.98
CLN6-206ENST00000565471 ARHGAP26Q9UNA1 814 aa21.18■□□□□ 0.98
CLN6-206ENST00000565471 SMG5Q9UPR3 1016 aaKnown RBP21.18■□□□□ 0.98
CLN6-206ENST00000565471 TRAF3IP3Q9Y228 551 aa21.18■□□□□ 0.98
CLN6-206ENST00000565471 DMDP11532 3685 aa21.17■□□□□ 0.98
CLN6-206ENST00000565471 C2orf78A6NCI8 922 aa21.17■□□□□ 0.98
CLN6-206ENST00000565471 OTOL1A6NHN0 477 aaPredicted RBP21.17■□□□□ 0.98
CLN6-206ENST00000565471 TRDMT1O14717 391 aaKnown RBP21.17■□□□□ 0.98
CLN6-206ENST00000565471 MAPK13O15264 365 aa21.17■□□□□ 0.98
CLN6-206ENST00000565471 CALUO43852 315 aaPredicted RBP21.17■□□□□ 0.98
CLN6-206ENST00000565471 ARSAP15289 507 aa21.17■□□□□ 0.98
CLN6-206ENST00000565471 HDCP19113 662 aa21.17■□□□□ 0.98
CLN6-206ENST00000565471 USP46P62068 366 aa21.17■□□□□ 0.98
CLN6-206ENST00000565471 DPYDQ12882 1025 aa21.17■□□□□ 0.98
CLN6-206ENST00000565471 ZACNQ401N2 412 aa21.17■□□□□ 0.98
CLN6-206ENST00000565471 TMEM196Q5HYL7 178 aa21.17■□□□□ 0.98
CLN6-206ENST00000565471 KRBA2Q6ZNG9 492 aa21.17■□□□□ 0.98
CLN6-206ENST00000565471 ARL14EPQ8N8R7 260 aaPredicted RBP21.17■□□□□ 0.98
CLN6-206ENST00000565471 OSCP1Q8WVF1 389 aa21.17■□□□□ 0.98
CLN6-206ENST00000565471 CHFRQ96EP1 664 aa21.17■□□□□ 0.98
CLN6-206ENST00000565471 ZNF518BQ9C0D4 1074 aa21.17■□□□□ 0.98
CLN6-206ENST00000565471 SMYD3Q9H7B4 428 aa21.17■□□□□ 0.98
CLN6-206ENST00000565471 TRPM5Q9NZQ8 1165 aa21.17■□□□□ 0.98
CLN6-206ENST00000565471 NCDNQ9UBB6 729 aa21.17■□□□□ 0.98
CLN6-206ENST00000565471 IKBKBO14920 756 aa21.16■□□□□ 0.98
CLN6-206ENST00000565471 VNN1O95497 513 aa21.16■□□□□ 0.98
CLN6-206ENST00000565471 PRR29P0C7W0 189 aa21.16■□□□□ 0.98
CLN6-206ENST00000565471 DLG4P78352 724 aa21.16■□□□□ 0.98
CLN6-206ENST00000565471 GRSF1Q12849 480 aaKnown RBP eCLIP21.16■□□□□ 0.98
CLN6-206ENST00000565471 NFIL3Q16649 462 aa21.16■□□□□ 0.98
CLN6-206ENST00000565471 KIAA2013Q8IYS2 634 aa21.16■□□□□ 0.98
CLN6-206ENST00000565471 CPA6Q8N4T0 437 aa21.16■□□□□ 0.98
CLN6-206ENST00000565471 DCLK2Q8N568 766 aa21.16■□□□□ 0.98
CLN6-206ENST00000565471 SECISBP2LQ93073 1101 aaKnown RBP21.16■□□□□ 0.98
CLN6-206ENST00000565471 TNIP3Q96KP6 325 aa21.16■□□□□ 0.98
CLN6-206ENST00000565471 B3GNT5Q9BYG0 378 aa21.16■□□□□ 0.98
CLN6-206ENST00000565471 DUS2Q9NX74 493 aaKnown RBP21.16■□□□□ 0.98
CLN6-206ENST00000565471 FRMD4BQ9Y2L6 1034 aa21.16■□□□□ 0.98
CLN6-206ENST00000565471 HELZP42694 1942 aaKnown RBP21.16■□□□□ 0.98
CLN6-206ENST00000565471 ATP8B3O60423 1300 aa21.15■□□□□ 0.98
CLN6-206ENST00000565471 ZNF840PA6NDX5 716 aa21.15■□□□□ 0.98
CLN6-206ENST00000565471 K7ESF4 209 aa21.15■□□□□ 0.98
CLN6-206ENST00000565471 P4HA1P13674 534 aa21.15■□□□□ 0.98
CLN6-206ENST00000565471 HOXA6P31267 233 aa21.15■□□□□ 0.98
CLN6-206ENST00000565471 ID4P47928 161 aa21.15■□□□□ 0.98
CLN6-206ENST00000565471 IFNAR2P48551 515 aa21.15■□□□□ 0.98
CLN6-206ENST00000565471 CACNA2D1P54289 1103 aa21.15■□□□□ 0.98
CLN6-206ENST00000565471 CDH8P55286 799 aa21.15■□□□□ 0.98
CLN6-206ENST00000565471 SGSM1Q2NKQ1 1148 aa21.15■□□□□ 0.98
CLN6-206ENST00000565471 CEP135Q66GS9 1140 aa21.15■□□□□ 0.98
CLN6-206ENST00000565471 FSTL4Q6MZW2 842 aa21.15■□□□□ 0.98
CLN6-206ENST00000565471 KIAA1958Q8N8K9 716 aa21.15■□□□□ 0.98
CLN6-206ENST00000565471 SH3RF2Q8TEC5 729 aa21.15■□□□□ 0.98
CLN6-206ENST00000565471 TAF4BQ92750 862 aa21.15■□□□□ 0.98
CLN6-206ENST00000565471 ATP2A3Q93084 1043 aa21.15■□□□□ 0.98
CLN6-206ENST00000565471 EXOC4Q96A65 974 aa21.15■□□□□ 0.98
CLN6-206ENST00000565471 ECT2Q9H8V3 914 aa21.15■□□□□ 0.98
CLN6-206ENST00000565471 TMEM30AQ9NV96 361 aa21.15■□□□□ 0.98
CLN6-206ENST00000565471 ZNF292O60281 2723 aa21.15■□□□□ 0.98
CLN6-206ENST00000565471 GPR179Q6PRD1 2367 aa21.15■□□□□ 0.98
CLN6-206ENST00000565471 CLSTN1O94985 981 aa21.14■□□□□ 0.97
CLN6-206ENST00000565471 OLFM2O95897 454 aa21.14■□□□□ 0.97
CLN6-206ENST00000565471 GJA4P35212 333 aa21.14■□□□□ 0.97
CLN6-206ENST00000565471 SLC7A9P82251 487 aa21.14■□□□□ 0.97
CLN6-206ENST00000565471 EML3Q32P44 896 aa21.14■□□□□ 0.97
CLN6-206ENST00000565471 SV2AQ7L0J3 742 aa21.14■□□□□ 0.97
CLN6-206ENST00000565471 LONP2Q86WA8 852 aa21.14■□□□□ 0.97
CLN6-206ENST00000565471 GUF1Q8N442 669 aaKnown RBP21.14■□□□□ 0.97
CLN6-206ENST00000565471 GPR161Q8N6U8 529 aaKnown RBP21.14■□□□□ 0.97
CLN6-206ENST00000565471 SLITRK1Q96PX8 696 aa21.14■□□□□ 0.97
CLN6-206ENST00000565471 SDCBP2Q9H190 292 aa21.14■□□□□ 0.97
CLN6-206ENST00000565471 GOLPH3LQ9H4A5 285 aa21.14■□□□□ 0.97
CLN6-206ENST00000565471 WNT6Q9Y6F9 365 aa21.14■□□□□ 0.97
CLN6-206ENST00000565471 CLDN5O00501 218 aa21.13■□□□□ 0.97
CLN6-206ENST00000565471 ZNF202O95125 648 aa21.13■□□□□ 0.97
CLN6-206ENST00000565471 ASS1P00966 412 aaKnown RBP21.13■□□□□ 0.97
CLN6-206ENST00000565471 DRD1P21728 446 aa21.13■□□□□ 0.97
CLN6-206ENST00000565471 CNR2P34972 360 aa21.13■□□□□ 0.97
CLN6-206ENST00000565471 RAP1GAPP47736 663 aa21.13■□□□□ 0.97
CLN6-206ENST00000565471 ENPEPQ07075 957 aa21.13■□□□□ 0.97
CLN6-206ENST00000565471 TAF10Q12962 218 aa21.13■□□□□ 0.97
CLN6-206ENST00000565471 C1orf220Q5T0J3 134 aa21.13■□□□□ 0.97
CLN6-206ENST00000565471 SCARA5Q6ZMJ2 495 aa21.13■□□□□ 0.97
CLN6-206ENST00000565471 FAM35AQ86V20 835 aa21.13■□□□□ 0.97
CLN6-206ENST00000565471 NUP93Q8N1F7 819 aa21.13■□□□□ 0.97
CLN6-206ENST00000565471 OVCA2Q8WZ82 227 aa21.13■□□□□ 0.97
CLN6-206ENST00000565471 P2RY13Q9BPV8 354 aa21.13■□□□□ 0.97
CLN6-206ENST00000565471 C2orf42Q9NWW7 574 aa21.13■□□□□ 0.97
CLN6-206ENST00000565471 SPTBN4Q9H254 2564 aa21.12■□□□□ 0.97
CLN6-206ENST00000565471 CHURC1-FNTBB4DL54 471 aa21.12■□□□□ 0.97
CLN6-206ENST00000565471 ATG13O75143 517 aa21.12■□□□□ 0.97
CLN6-206ENST00000565471 RTN3O95197 1032 aaPredicted RBP21.12■□□□□ 0.97
CLN6-206ENST00000565471 OAS1P00973 400 aaKnown RBP21.12■□□□□ 0.97
CLN6-206ENST00000565471 NR2F2P24468 414 aa21.12■□□□□ 0.97
CLN6-206ENST00000565471 FNTBP49356 437 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms