RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 PCED1BQ96HM7 432 aa27.5■■□□□ 1.99
NME3-208ENST00000565379 MRFAP1L1Q96HT8 127 aa27.5■■□□□ 1.99
NME3-208ENST00000565379 PGLYRP2Q96PD5 576 aa27.5■■□□□ 1.99
NME3-208ENST00000565379 TMLHEQ9NVH6 421 aa27.5■■□□□ 1.99
NME3-208ENST00000565379 FOXN3O00409 490 aaPredicted RBP27.49■■□□□ 1.99
NME3-208ENST00000565379 PRRG1O14668 218 aa27.49■■□□□ 1.99
NME3-208ENST00000565379 HNRNPA1P09651 372 aaKnown RBP eCLIP27.49■■□□□ 1.99
NME3-208ENST00000565379 CCDC172P0C7W6 258 aa27.49■■□□□ 1.99
NME3-208ENST00000565379 USP8P40818 1118 aa27.49■■□□□ 1.99
NME3-208ENST00000565379 MAGEA11P43364 429 aa27.49■■□□□ 1.99
NME3-208ENST00000565379 JAM2P57087 298 aa27.49■■□□□ 1.99
NME3-208ENST00000565379 CYP27A1Q02318 531 aa27.49■■□□□ 1.99
NME3-208ENST00000565379 PLD1Q13393 1074 aa27.49■■□□□ 1.99
NME3-208ENST00000565379 SGO2Q562F6 1265 aa27.49■■□□□ 1.99
NME3-208ENST00000565379 ARHGAP17Q68EM7 881 aa27.49■■□□□ 1.99
NME3-208ENST00000565379 VSTM1Q6UX27 236 aa27.49■■□□□ 1.99
NME3-208ENST00000565379 VSTM4Q8IW00 320 aa27.49■■□□□ 1.99
NME3-208ENST00000565379 ATOH1Q92858 354 aaPredicted RBP27.49■■□□□ 1.99
NME3-208ENST00000565379 CEP295NLQ96MC4 621 aa27.49■■□□□ 1.99
NME3-208ENST00000565379 HNRNPABQ99729 332 aaKnown RBP27.49■■□□□ 1.99
NME3-208ENST00000565379 GPR88Q9GZN0 384 aa27.49■■□□□ 1.99
NME3-208ENST00000565379 NUCKS1Q9H1E3 243 aaKnown RBP27.49■■□□□ 1.99
NME3-208ENST00000565379 CYP4F11Q9HBI6 524 aa27.49■■□□□ 1.99
NME3-208ENST00000565379 NLRC4Q9NPP4 1024 aa27.49■■□□□ 1.99
NME3-208ENST00000565379 ABI2Q9NYB9 513 aaPredicted RBP27.49■■□□□ 1.99
NME3-208ENST00000565379 DNMT3BQ9UBC3 853 aaKnown RBP27.49■■□□□ 1.99
NME3-208ENST00000565379 AJAP1Q9UKB5 411 aaPredicted RBP27.49■■□□□ 1.99
NME3-208ENST00000565379 GOLGA6L3A6NEY3 463 aa27.48■■□□□ 1.99
NME3-208ENST00000565379 SEC24AO95486 1093 aa27.48■■□□□ 1.99
NME3-208ENST00000565379 LAMP2P13473 410 aa27.48■■□□□ 1.99
NME3-208ENST00000565379 HOXA9P31269 272 aa27.48■■□□□ 1.99
NME3-208ENST00000565379 PTK2Q05397 1052 aa27.48■■□□□ 1.99
NME3-208ENST00000565379 TMEM105Q8N8V8 129 aa27.48■■□□□ 1.99
NME3-208ENST00000565379 ATAD1Q8NBU5 361 aa27.48■■□□□ 1.99
NME3-208ENST00000565379 ZNF397Q8NF99 534 aaPredicted RBP27.48■■□□□ 1.99
NME3-208ENST00000565379 CYFIP2Q96F07 1278 aa27.48■■□□□ 1.99
NME3-208ENST00000565379 RPP25Q9BUL9 199 aaKnown RBP27.48■■□□□ 1.99
NME3-208ENST00000565379 TTYH3Q9C0H2 523 aa27.48■■□□□ 1.99
NME3-208ENST00000565379 DUSP12Q9UNI6 340 aa27.48■■□□□ 1.99
NME3-208ENST00000565379 RNF225M0QZC1 329 aaPredicted RBP27.47■■□□□ 1.99
NME3-208ENST00000565379 NRG2O14511 850 aaPredicted RBP27.47■■□□□ 1.99
NME3-208ENST00000565379 MED7O43513 233 aa27.47■■□□□ 1.99
NME3-208ENST00000565379 HAPLN1P10915 354 aaPredicted RBP27.47■■□□□ 1.99
NME3-208ENST00000565379 CD19P15391 556 aa27.47■■□□□ 1.99
NME3-208ENST00000565379 SOX5P35711 763 aa27.47■■□□□ 1.99
NME3-208ENST00000565379 ZNF75DP51815 510 aa27.47■■□□□ 1.99
NME3-208ENST00000565379 DUSP4Q13115 394 aa27.47■■□□□ 1.99
NME3-208ENST00000565379 ORC1Q13415 861 aa27.47■■□□□ 1.99
NME3-208ENST00000565379 POTEHQ6S545 545 aa27.47■■□□□ 1.99
NME3-208ENST00000565379 MED10Q9BTT4 135 aa27.47■■□□□ 1.99
NME3-208ENST00000565379 B3GNT5Q9BYG0 378 aa27.47■■□□□ 1.99
NME3-208ENST00000565379 AP5Z1O43299 807 aa27.46■■□□□ 1.99
NME3-208ENST00000565379 GALR2O43603 387 aaPredicted RBP27.46■■□□□ 1.99
NME3-208ENST00000565379 VNN2O95498 520 aa27.46■■□□□ 1.99
NME3-208ENST00000565379 POU2F2P09086 479 aa27.46■■□□□ 1.99
NME3-208ENST00000565379 TPM1P09493 284 aa27.46■■□□□ 1.99
NME3-208ENST00000565379 RPL10AP62906 217 aaKnown RBP27.46■■□□□ 1.99
NME3-208ENST00000565379 HTR4Q13639 388 aa27.46■■□□□ 1.99
NME3-208ENST00000565379 MEA1Q16626 185 aa27.46■■□□□ 1.99
NME3-208ENST00000565379 MGAT5BQ3V5L5 792 aa27.46■■□□□ 1.99
NME3-208ENST00000565379 SLC44A3Q8N4M1 653 aa27.46■■□□□ 1.99
NME3-208ENST00000565379 C12orf29Q8N999 325 aa27.46■■□□□ 1.99
NME3-208ENST00000565379 SLC2A14Q8TDB8 520 aa27.46■■□□□ 1.99
NME3-208ENST00000565379 ING5Q8WYH8 240 aa27.46■■□□□ 1.99
NME3-208ENST00000565379 SMARCD1Q96GM5 515 aa27.46■■□□□ 1.99
NME3-208ENST00000565379 IGSF9Q9P2J2 1179 aa27.46■■□□□ 1.99
NME3-208ENST00000565379 TRIM66O15016 1216 aa27.45■■□□□ 1.98
NME3-208ENST00000565379 XYLBO75191 536 aa27.45■■□□□ 1.98
NME3-208ENST00000565379 CFHP08603 1231 aa27.45■■□□□ 1.98
NME3-208ENST00000565379 GNA15P30679 374 aa27.45■■□□□ 1.98
NME3-208ENST00000565379 ALDH1A3P47895 512 aa27.45■■□□□ 1.98
NME3-208ENST00000565379 CNGA2Q16280 664 aa27.45■■□□□ 1.98
NME3-208ENST00000565379 SLC5A9Q2M3M2 681 aa27.45■■□□□ 1.98
NME3-208ENST00000565379 CWF19L1Q69YN2 538 aaKnown RBP27.45■■□□□ 1.98
NME3-208ENST00000565379 FAM35AQ86V20 835 aa27.45■■□□□ 1.98
NME3-208ENST00000565379 FUKQ8N0W3 1084 aa27.45■■□□□ 1.98
NME3-208ENST00000565379 FAM49BQ9NUQ9 324 aa27.45■■□□□ 1.98
NME3-208ENST00000565379 FAM86C1Q9NVL1 165 aa27.45■■□□□ 1.98
NME3-208ENST00000565379 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP27.45■■□□□ 1.981e-9■■■■■ 33.5
NME3-208ENST00000565379 CAPN11Q9UMQ6 739 aa27.45■■□□□ 1.98
NME3-208ENST00000565379 INSL5Q9Y5Q6 135 aa27.45■■□□□ 1.98
NME3-208ENST00000565379 NUMBLQ9Y6R0 609 aa27.45■■□□□ 1.98
NME3-208ENST00000565379 ANHXE9PGG2 379 aa27.44■■□□□ 1.98
NME3-208ENST00000565379 H0Y858 1186 aa27.44■■□□□ 1.98
NME3-208ENST00000565379 CYP26A1O43174 497 aa27.44■■□□□ 1.98
NME3-208ENST00000565379 NPR3P17342 541 aa27.44■■□□□ 1.98
NME3-208ENST00000565379 BDNFP23560 247 aa27.44■■□□□ 1.98
NME3-208ENST00000565379 SLC8A3P57103 927 aa27.44■■□□□ 1.98
NME3-208ENST00000565379 PPP1R26Q5T8A7 1209 aaPredicted RBP27.44■■□□□ 1.98
NME3-208ENST00000565379 PARM1Q6UWI2 310 aa27.44■■□□□ 1.98
NME3-208ENST00000565379 BAP1Q92560 729 aa27.44■■□□□ 1.98
NME3-208ENST00000565379 FGF13Q92913 245 aa27.44■■□□□ 1.98
NME3-208ENST00000565379 FGF14Q92915 247 aa27.44■■□□□ 1.98
NME3-208ENST00000565379 SEPT5Q99719 369 aaPredicted RBP27.44■■□□□ 1.98
NME3-208ENST00000565379 HESX1Q9UBX0 185 aa27.44■■□□□ 1.98
NME3-208ENST00000565379 CDH7Q9ULB5 785 aa27.44■■□□□ 1.98
NME3-208ENST00000565379 LUC7L2Q9Y383 392 aaKnown RBP27.44■■□□□ 1.98
NME3-208ENST00000565379 ZFHX2Q9C0A1 2572 aaPredicted RBP27.44■■□□□ 1.98
NME3-208ENST00000565379 LRG1P02750 347 aa27.43■■□□□ 1.98
NME3-208ENST00000565379 FAM200BP0CF97 657 aa27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms