RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 CXCL10P02778 98 aa20.56■□□□□ 0.88
CLN6-205ENST00000564846 KRT7P08729 469 aa20.56■□□□□ 0.88
CLN6-205ENST00000564846 TYMPP19971 482 aa20.56■□□□□ 0.88
CLN6-205ENST00000564846 GJC1P36383 396 aa20.56■□□□□ 0.88
CLN6-205ENST00000564846 RNASELQ05823 741 aaKnown RBP20.56■□□□□ 0.88
CLN6-205ENST00000564846 FAAP100Q0VG06 881 aa20.56■□□□□ 0.88
CLN6-205ENST00000564846 PAQR9Q6ZVX9 377 aa20.56■□□□□ 0.88
CLN6-205ENST00000564846 ZNF280BQ86YH2 543 aa20.56■□□□□ 0.88
CLN6-205ENST00000564846 COLGALT2Q8IYK4 626 aa20.56■□□□□ 0.88
CLN6-205ENST00000564846 ABI1Q8IZP0 508 aa20.56■□□□□ 0.88
CLN6-205ENST00000564846 RUNDC3BQ96NL0 473 aa20.56■□□□□ 0.88
CLN6-205ENST00000564846 MED10Q9BTT4 135 aa20.56■□□□□ 0.88
CLN6-205ENST00000564846 AMACRQ9UHK6 382 aa20.56■□□□□ 0.88
CLN6-205ENST00000564846 I3L4J1 428 aa20.55■□□□□ 0.88
CLN6-205ENST00000564846 DPYSL4O14531 572 aa20.55■□□□□ 0.88
CLN6-205ENST00000564846 SEC31AO94979 1220 aaKnown RBP20.55■□□□□ 0.88
CLN6-205ENST00000564846 FAM200BP0CF97 657 aa20.55■□□□□ 0.88
CLN6-205ENST00000564846 TCF4P15884 667 aa20.55■□□□□ 0.88
CLN6-205ENST00000564846 PDGFRAP16234 1089 aa20.55■□□□□ 0.88
CLN6-205ENST00000564846 PCK1P35558 622 aa20.55■□□□□ 0.88
CLN6-205ENST00000564846 COPS2P61201 443 aa20.55■□□□□ 0.88
CLN6-205ENST00000564846 GUCY2DQ02846 1103 aa20.55■□□□□ 0.88
CLN6-205ENST00000564846 SLC25A11Q02978 314 aaKnown RBP20.55■□□□□ 0.88
CLN6-205ENST00000564846 TLE2Q04725 743 aa20.55■□□□□ 0.88
CLN6-205ENST00000564846 DHX34Q14147 1143 aaKnown RBP20.55■□□□□ 0.88
CLN6-205ENST00000564846 SMC1AQ14683 1233 aaKnown RBP20.55■□□□□ 0.88
CLN6-205ENST00000564846 ODF2Q5BJF6 829 aa20.55■□□□□ 0.88
CLN6-205ENST00000564846 ARCQ7LC44 396 aa20.55■□□□□ 0.88
CLN6-205ENST00000564846 MYCBPAPQ8TBZ2 947 aa20.55■□□□□ 0.88
CLN6-205ENST00000564846 RXFP2Q8WXD0 754 aa20.55■□□□□ 0.88
CLN6-205ENST00000564846 KCTD13Q8WZ19 329 aa20.55■□□□□ 0.88
CLN6-205ENST00000564846 PIWIL1Q96J94 861 aaKnown RBP20.55■□□□□ 0.88
CLN6-205ENST00000564846 FAM193BQ96PV7 902 aaPredicted RBP20.55■□□□□ 0.88
CLN6-205ENST00000564846 B3GNT5Q9BYG0 378 aa20.55■□□□□ 0.88
CLN6-205ENST00000564846 EPB41L5Q9HCM4 733 aa20.55■□□□□ 0.88
CLN6-205ENST00000564846 MYBPHLA2RUH7 354 aa20.54■□□□□ 0.88
CLN6-205ENST00000564846 KRT1P04264 644 aa20.54■□□□□ 0.88
CLN6-205ENST00000564846 RARAP10276 462 aa20.54■□□□□ 0.88
CLN6-205ENST00000564846 DESP17661 470 aa20.54■□□□□ 0.88
CLN6-205ENST00000564846 SIX1Q15475 284 aaPredicted RBP20.54■□□□□ 0.88
CLN6-205ENST00000564846 TRIM60Q495X7 471 aa20.54■□□□□ 0.88
CLN6-205ENST00000564846 ZFYVE27Q5T4F4 411 aa20.54■□□□□ 0.88
CLN6-205ENST00000564846 SLC26A9Q7LBE3 791 aa20.54■□□□□ 0.88
CLN6-205ENST00000564846 PIGZQ86VD9 579 aa20.54■□□□□ 0.88
CLN6-205ENST00000564846 ZDHHC14Q8IZN3 488 aa20.54■□□□□ 0.88
CLN6-205ENST00000564846 THEM5Q8N1Q8 247 aa20.54■□□□□ 0.88
CLN6-205ENST00000564846 ARFGAP1Q8N6T3 406 aa20.54■□□□□ 0.88
CLN6-205ENST00000564846 C12orf50Q8NA57 414 aaPredicted RBP20.54■□□□□ 0.88
CLN6-205ENST00000564846 HASPINQ8TF76 798 aa20.54■□□□□ 0.88
CLN6-205ENST00000564846 MAGOHBQ96A72 148 aaKnown RBP20.54■□□□□ 0.88
CLN6-205ENST00000564846 PCED1BQ96HM7 432 aa20.54■□□□□ 0.88
CLN6-205ENST00000564846 NCAPGQ9BPX3 1015 aa20.54■□□□□ 0.88
CLN6-205ENST00000564846 RTP3Q9BQQ7 232 aa20.54■□□□□ 0.88
CLN6-205ENST00000564846 OSBPL8Q9BZF1 889 aa20.54■□□□□ 0.88
CLN6-205ENST00000564846 PCDHB8Q9UN66 801 aa20.54■□□□□ 0.88
CLN6-205ENST00000564846 TCRBV7S2A1N4TA0A589 114 aa20.54■□□□□ 0.88
CLN6-205ENST00000564846 CLDN5O00501 218 aa20.54■□□□□ 0.88
CLN6-205ENST00000564846 HOXA2O43364 376 aa20.54■□□□□ 0.88
CLN6-205ENST00000564846 ITGB1P05556 798 aa20.54■□□□□ 0.88
CLN6-205ENST00000564846 RALAP11233 206 aa20.54■□□□□ 0.88
CLN6-205ENST00000564846 FLT3P36888 993 aa20.54■□□□□ 0.88
CLN6-205ENST00000564846 DR1Q01658 176 aa20.54■□□□□ 0.88
CLN6-205ENST00000564846 ATP13A4Q4VNC1 1196 aa20.54■□□□□ 0.88
CLN6-205ENST00000564846 OVOS1Q6IE37 1185 aa20.54■□□□□ 0.88
CLN6-205ENST00000564846 CLEC20AQ6ZU45 233 aa20.54■□□□□ 0.88
CLN6-205ENST00000564846 FAM35AQ86V20 835 aa20.54■□□□□ 0.88
CLN6-205ENST00000564846 KHSRPQ92945 711 aaKnown RBP eCLIP20.54■□□□□ 0.888e-8■□□□□ 8.3
CLN6-205ENST00000564846 ARMC5Q96C12 935 aa20.54■□□□□ 0.88
CLN6-205ENST00000564846 SLITRK1Q96PX8 696 aa20.54■□□□□ 0.88
CLN6-205ENST00000564846 PCYOX1Q9UHG3 505 aa20.54■□□□□ 0.88
CLN6-205ENST00000564846 LRFN2Q9ULH4 789 aa20.54■□□□□ 0.88
CLN6-205ENST00000564846 FAM187AA6NFU0 413 aa20.53■□□□□ 0.88
CLN6-205ENST00000564846 LCP1P13796 627 aa20.53■□□□□ 0.88
CLN6-205ENST00000564846 PTPN7P35236 360 aa20.53■□□□□ 0.88
CLN6-205ENST00000564846 FNTAP49354 379 aa20.53■□□□□ 0.88
CLN6-205ENST00000564846 CCL23P55773 120 aa20.53■□□□□ 0.88
CLN6-205ENST00000564846 PKN2Q16513 984 aaKnown RBP20.53■□□□□ 0.88
CLN6-205ENST00000564846 CCDC142Q17RM4 750 aa20.53■□□□□ 0.88
CLN6-205ENST00000564846 INTS6LQ5JSJ4 861 aaKnown RBP20.53■□□□□ 0.88
CLN6-205ENST00000564846 TRNP1Q6NT89 227 aa20.53■□□□□ 0.88
CLN6-205ENST00000564846 FAM171BQ6P995 826 aa20.53■□□□□ 0.88
CLN6-205ENST00000564846 EIF1ADQ8N9N8 165 aaKnown RBP20.53■□□□□ 0.88
CLN6-205ENST00000564846 ANKLE1Q8NAG6 615 aa20.53■□□□□ 0.88
CLN6-205ENST00000564846 RNF25Q96BH1 459 aaPredicted RBP20.53■□□□□ 0.88
CLN6-205ENST00000564846 SCLYQ96I15 445 aa20.53■□□□□ 0.88
CLN6-205ENST00000564846 HINFPQ9BQA5 517 aa20.53■□□□□ 0.88
CLN6-205ENST00000564846 LRRC19Q9H756 370 aa20.53■□□□□ 0.88
CLN6-205ENST00000564846 KRT82Q9NSB4 513 aa20.53■□□□□ 0.88
CLN6-205ENST00000564846 HOMER3Q9NSC5 361 aa20.53■□□□□ 0.88
CLN6-205ENST00000564846 TRAPPC3O43617 180 aa20.52■□□□□ 0.88
CLN6-205ENST00000564846 B4GALT3O60512 393 aa20.52■□□□□ 0.88
CLN6-205ENST00000564846 GRAP2O75791 330 aa20.52■□□□□ 0.88
CLN6-205ENST00000564846 SDC4P31431 198 aa20.52■□□□□ 0.88
CLN6-205ENST00000564846 OR1G1P47890 313 aa20.52■□□□□ 0.88
CLN6-205ENST00000564846 KLF1Q13351 362 aaPredicted RBP20.52■□□□□ 0.88
CLN6-205ENST00000564846 TAF5Q15542 800 aa20.52■□□□□ 0.88
CLN6-205ENST00000564846 MAPRE1Q15691 268 aaKnown RBP20.52■□□□□ 0.88
CLN6-205ENST00000564846 EFHC1Q5JVL4 640 aa20.52■□□□□ 0.88
CLN6-205ENST00000564846 UBXN6Q9BZV1 441 aa20.52■□□□□ 0.88
CLN6-205ENST00000564846 RAB17Q9H0T7 212 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms