RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 PPP1R12AO14974 1030 aaPredicted RBP16.2■□□□□ 0.18
GTF3C1-205ENST00000564747 ERBB2P04626 1255 aa16.2■□□□□ 0.18
GTF3C1-205ENST00000564747 KRT19P08727 400 aa16.2■□□□□ 0.18
GTF3C1-205ENST00000564747 RBP3P10745 1247 aa16.2■□□□□ 0.18
GTF3C1-205ENST00000564747 GNAZP19086 355 aa16.2■□□□□ 0.18
GTF3C1-205ENST00000564747 CALB2P22676 271 aa16.2■□□□□ 0.18
GTF3C1-205ENST00000564747 GCKP35557 465 aa16.2■□□□□ 0.18
GTF3C1-205ENST00000564747 TCF7P36402 384 aaPredicted RBP16.2■□□□□ 0.18
GTF3C1-205ENST00000564747 DPYSL3Q14195 570 aa16.2■□□□□ 0.18
GTF3C1-205ENST00000564747 CTC1Q2NKJ3 1217 aa16.2■□□□□ 0.18
GTF3C1-205ENST00000564747 ZC3H12AQ5D1E8 599 aaKnown RBP16.2■□□□□ 0.18
GTF3C1-205ENST00000564747 NPNTQ6UXI9 565 aa16.2■□□□□ 0.18
GTF3C1-205ENST00000564747 LRRC6Q86X45 466 aa16.2■□□□□ 0.18
GTF3C1-205ENST00000564747 XYLT1Q86Y38 959 aa16.2■□□□□ 0.18
GTF3C1-205ENST00000564747 CALN1Q9BXU9 219 aa16.2■□□□□ 0.18
GTF3C1-205ENST00000564747 SYNCQ9H7C4 482 aa16.2■□□□□ 0.18
GTF3C1-205ENST00000564747 MANSC1Q9H8J5 431 aa16.2■□□□□ 0.18
GTF3C1-205ENST00000564747 A0A0G2JND7 137 aa16.19■□□□□ 0.18
GTF3C1-205ENST00000564747 MIPP30301 263 aa16.19■□□□□ 0.18
GTF3C1-205ENST00000564747 RASSF2P50749 326 aa16.19■□□□□ 0.18
GTF3C1-205ENST00000564747 EEPD1Q7L9B9 569 aa16.19■□□□□ 0.18
GTF3C1-205ENST00000564747 DNERQ8NFT8 737 aa16.19■□□□□ 0.18
GTF3C1-205ENST00000564747 HOXC10Q9NYD6 342 aa16.19■□□□□ 0.18
GTF3C1-205ENST00000564747 C19orf81C9J6K1 198 aa16.19■□□□□ 0.18
GTF3C1-205ENST00000564747 TM9SF1O15321 606 aa16.19■□□□□ 0.18
GTF3C1-205ENST00000564747 ENTPD5O75356 428 aa16.19■□□□□ 0.18
GTF3C1-205ENST00000564747 GJB1P08034 283 aa16.19■□□□□ 0.18
GTF3C1-205ENST00000564747 TROVE2P10155 538 aaKnown RBP eCLIP16.19■□□□□ 0.18
GTF3C1-205ENST00000564747 ELK3P41970 407 aa16.19■□□□□ 0.18
GTF3C1-205ENST00000564747 GMPSP49915 693 aaPredicted RBP16.19■□□□□ 0.18
GTF3C1-205ENST00000564747 MMRN1Q13201 1228 aa16.19■□□□□ 0.18
GTF3C1-205ENST00000564747 ZC3H18Q86VM9 953 aaKnown RBP16.19■□□□□ 0.18
GTF3C1-205ENST00000564747 TTC8Q8TAM2 541 aa16.19■□□□□ 0.18
GTF3C1-205ENST00000564747 SPATA18Q8TC71 538 aa16.19■□□□□ 0.18
GTF3C1-205ENST00000564747 SERAC1Q96JX3 654 aa16.19■□□□□ 0.18
GTF3C1-205ENST00000564747 NUDCD1Q96RS6 583 aa16.19■□□□□ 0.18
GTF3C1-205ENST00000564747 PHACTR1Q9C0D0 580 aa16.19■□□□□ 0.18
GTF3C1-205ENST00000564747 VPS11Q9H270 941 aa16.19■□□□□ 0.18
GTF3C1-205ENST00000564747 LHX5Q9H2C1 402 aa16.19■□□□□ 0.18
GTF3C1-205ENST00000564747 DENND2DQ9H6A0 471 aaPredicted RBP16.19■□□□□ 0.18
GTF3C1-205ENST00000564747 DOCK1Q14185 1865 aa16.18■□□□□ 0.18
GTF3C1-205ENST00000564747 H0Y3Z8 333 aa16.18■□□□□ 0.18
GTF3C1-205ENST00000564747 APOC4-APOC2K7ER74 178 aa16.18■□□□□ 0.18
GTF3C1-205ENST00000564747 TRAFD1O14545 582 aaPredicted RBP16.18■□□□□ 0.18
GTF3C1-205ENST00000564747 APOC2P02655 101 aa16.18■□□□□ 0.18
GTF3C1-205ENST00000564747 MT-ND3P03897 115 aa16.18■□□□□ 0.18
GTF3C1-205ENST00000564747 MYCNP04198 464 aaPredicted RBP16.18■□□□□ 0.18
GTF3C1-205ENST00000564747 TPBGLP0DKB5 382 aa16.18■□□□□ 0.18
GTF3C1-205ENST00000564747 PTPN4P29074 926 aa16.18■□□□□ 0.18
GTF3C1-205ENST00000564747 RAD23BP54727 409 aa16.18■□□□□ 0.18
GTF3C1-205ENST00000564747 CAPRIN2Q6IMN6 1127 aaKnown RBP16.18■□□□□ 0.18
GTF3C1-205ENST00000564747 TRIM50Q86XT4 487 aa16.18■□□□□ 0.18
GTF3C1-205ENST00000564747 TMEM192Q8IY95 271 aa16.18■□□□□ 0.18
GTF3C1-205ENST00000564747 CMASQ8NFW8 434 aaPredicted RBP16.18■□□□□ 0.18
GTF3C1-205ENST00000564747 FNIP1Q8TF40 1166 aa16.18■□□□□ 0.18
GTF3C1-205ENST00000564747 STK32AQ8WU08 396 aa16.18■□□□□ 0.18
GTF3C1-205ENST00000564747 TWNKQ96RR1 684 aa16.18■□□□□ 0.18
GTF3C1-205ENST00000564747 FRMD8P1Q9BZ68 369 aaPredicted RBP16.18■□□□□ 0.18
GTF3C1-205ENST00000564747 HMGXB4Q9UGU5 601 aa16.18■□□□□ 0.18
GTF3C1-205ENST00000564747 B4GALT5O43286 388 aa16.18■□□□□ 0.18
GTF3C1-205ENST00000564747 LPXNO60711 386 aa16.18■□□□□ 0.18
GTF3C1-205ENST00000564747 AVILO75366 819 aa16.18■□□□□ 0.18
GTF3C1-205ENST00000564747 SATB1Q01826 763 aa16.18■□□□□ 0.18
GTF3C1-205ENST00000564747 LY6KQ17RY6 165 aa16.18■□□□□ 0.18
GTF3C1-205ENST00000564747 KBTBD12Q3ZCT8 623 aa16.18■□□□□ 0.18
GTF3C1-205ENST00000564747 RAB6CQ53S08 254 aa16.18■□□□□ 0.18
GTF3C1-205ENST00000564747 SH3PXD2AQ5TCZ1 1133 aa16.18■□□□□ 0.18
GTF3C1-205ENST00000564747 NAIF1Q69YI7 327 aaPredicted RBP16.18■□□□□ 0.18
GTF3C1-205ENST00000564747 CYTH2Q99418 400 aa16.18■□□□□ 0.18
GTF3C1-205ENST00000564747 MIPEPQ99797 713 aa16.18■□□□□ 0.18
GTF3C1-205ENST00000564747 RAB6CQ9H0N0 254 aa16.18■□□□□ 0.18
GTF3C1-205ENST00000564747 SDCBP2Q9H190 292 aa16.18■□□□□ 0.18
GTF3C1-205ENST00000564747 HEY2Q9UBP5 337 aa16.18■□□□□ 0.18
GTF3C1-205ENST00000564747 USP18Q9UMW8 372 aa16.18■□□□□ 0.18
GTF3C1-205ENST00000564747 GJA3Q9Y6H8 435 aa16.18■□□□□ 0.18
GTF3C1-205ENST00000564747 TCRBV9S1A1TA0A576 114 aa16.17■□□□□ 0.18
GTF3C1-205ENST00000564747 MCF2LO15068 1137 aa16.17■□□□□ 0.18
GTF3C1-205ENST00000564747 SMNDC1O75940 238 aaKnown RBP eCLIP16.17■□□□□ 0.18
GTF3C1-205ENST00000564747 LUC7L3O95232 432 aaKnown RBP16.17■□□□□ 0.18
GTF3C1-205ENST00000564747 TNNC2P02585 160 aa16.17■□□□□ 0.18
GTF3C1-205ENST00000564747 CCNHP51946 323 aaPredicted RBP16.17■□□□□ 0.18
GTF3C1-205ENST00000564747 IRX1P78414 480 aaPredicted RBP16.17■□□□□ 0.18
GTF3C1-205ENST00000564747 FAAP100Q0VG06 881 aa16.17■□□□□ 0.18
GTF3C1-205ENST00000564747 PTK7Q13308 1070 aa16.17■□□□□ 0.18
GTF3C1-205ENST00000564747 TAF11Q15544 211 aa16.17■□□□□ 0.18
GTF3C1-205ENST00000564747 IER5Q5VY09 327 aa16.17■□□□□ 0.18
GTF3C1-205ENST00000564747 FAM160B1Q5W0V3 765 aa16.17■□□□□ 0.18
GTF3C1-205ENST00000564747 CDCA2Q69YH5 1023 aaPredicted RBP16.17■□□□□ 0.18
GTF3C1-205ENST00000564747 ANKRD36BP1Q96IX9 119 aa16.17■□□□□ 0.18
GTF3C1-205ENST00000564747 CFAP69A5D8W1 941 aa16.17■□□□□ 0.18
GTF3C1-205ENST00000564747 TRUB2O95900 331 aaKnown RBP16.17■□□□□ 0.18
GTF3C1-205ENST00000564747 SURF1Q15526 300 aa16.17■□□□□ 0.18
GTF3C1-205ENST00000564747 EEF1DP3Q658K8 133 aa16.17■□□□□ 0.18
GTF3C1-205ENST00000564747 DARS2Q6PI48 645 aaKnown RBP16.17■□□□□ 0.18
GTF3C1-205ENST00000564747 ZBTB8OSQ8IWT0 167 aa16.17■□□□□ 0.18
GTF3C1-205ENST00000564747 ZNF398Q8TD17 642 aa16.17■□□□□ 0.18
GTF3C1-205ENST00000564747 ALKBH8Q96BT7 664 aaKnown RBP16.17■□□□□ 0.18
GTF3C1-205ENST00000564747 FAM111AQ96PZ2 611 aa16.17■□□□□ 0.18
GTF3C1-205ENST00000564747 FAM167BQ9BTA0 163 aa16.17■□□□□ 0.18
GTF3C1-205ENST00000564747 TSSK1BQ9BXA7 367 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms